Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
248 |
PWM (Da): |
25503.35 |
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PI (pH):
| 8.96 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASAIASRVS SVGVVARREL ASSLTSKVPV ASLAVVARKA CLGTTQLLSS TSWLASCAGL KPAAKLATSS LSRSGVTQVM ATISVGDKLP EANLSYFDTE GNVQSVSVSE LTRGKKVVLF
AVPGAFTPTC SSKHLPGFVA NAEELRKAGV DTLACVSVND AFVMQAWAKS VGAGDKVLML SDGLAKFTQA LGTTVDLTDK VEGLGIRSRR YSMLVDDGVV KVLNLEEGGA FTSSSAEEIL
SSLQKANA
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (no introns) and 40 ESTs. Incorrect prediction from Phytozome (5'end is missing) confirmed by ESTs |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCAG CAATTGCAAG TAGGGTCTCA TCTGTAGGGG TCGTCGCGAG GCGGGAGTTA GCTTCCAGCT TAACTTCTAA GGTGCCGGTC GCATCCCTCG CTGTTGTTGC TAGGAAGGCT
TGCCTGGGTA CAACCCAGCT GCTCTCGAGC ACTTCATGGC TCGCATCCTG CGCAGGGCTG AAACCCGCCG CGAAACTTGC AACCTCGTCG TTGTCCCGCT CAGGGGTGAC CCAAGTGATG
GCCACGATTT CTGTTGGGGA TAAACTTCCA GAGGCCAATC TATCCTATTT CGATACGGAG GGCAATGTGC AGAGCGTGAG CGTGTCAGAG CTCACCAGGG GGAAGAAGGT GGTGCTATTT
GCTGTTCCTG GGGCCTTCAC CCCCACTTGT TCCTCTAAGC ATTTGCCCGG GTTTGTGGCC AACGCTGAGG AGCTTCGCAA GGCGGGCGTG GACACCTTGG CTTGCGTCTC TGTGAACGAC
GCCTTTGTGA TGCAGGCATG GGCGAAGAGC GTCGGTGCCG GCGACAAAGT GCTCATGCTG TCAGACGGTT TGGCCAAGTT TACTCAGGCT TTAGGAACAA CTGTGGACTT GACGGACAAG
GTAGAGGGAC TGGGCATTCG GTCGCGGCGG TATTCCATGC TCGTGGATGA CGGCGTGGTG AAGGTTTTGA ACTTGGAGGA AGGAGGCGCG TTCACTAGTA GCAGTGCTGA AGAAATTTTG
AGCAGCTTGC AGAAGGCCAA TGCATAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCAG CAATTGCAAG TAGGGTCTCA TCTGTAGGGG TCGTCGCGAG GCGGGAGTTA GCTTCCAGCT TAACTTCTAA GGTGCCGGTC GCATCCCTCG CTGTTGTTGC TAGGAAGGCT
TGCCTGGGTA CAACCCAGCT GCTCTCGAGC ACTTCATGGC TCGCATCCTG CGCAGGGCTG AAACCCGCCG CGAAACTTGC AACCTCGTCG TTGTCCCGCT CAGGGGTGAC CCAAGTGATG
GCCACGATTT CTGTTGGGGA TAAACTTCCA GAGGCCAATC TATCCTATTT CGATACGGAG GGCAATGTGC AGAGCGTGAG CGTGTCAGAG CTCACCAGGG GGAAGAAGGT GGTGCTATTT
GCTGTTCCTG GGGCCTTCAC CCCCACTTGT TCCTCTAAGC ATTTGCCCGG GTTTGTGGCC AACGCTGAGG AGCTTCGCAA GGCGGGCGTG GACACCTTGG CTTGCGTCTC TGTGAACGAC
GCCTTTGTGA TGCAGGCATG GGCGAAGAGC GTCGGTGCCG GCGACAAAGT GCTCATGCTG TCAGACGGTT TGGCCAAGTT TACTCAGGCT TTAGGAACAA CTGTGGACTT GACGGACAAG
GTAGAGGGAC TGGGCATTCG GTCGCGGCGG TATTCCATGC TCGTGGATGA CGGCGTGGTG AAGGTTTTGA ACTTGGAGGA AGGAGGCGCG TTCACTAGTA GCAGTGCTGA AGAAATTTTG
AGCAGCTTGC AGAAGGCCAA TGCATAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTTCATGGCT CGCATCCTGC GCAGGGCTGA AACCCGCCGC GAAACTTGCA ACCTCGTCGT TGTCCCGCTC AGGGGTGACC CAAGTGATGG CCACGATTTC TGTTGGGGAT AAACTTCCAG
AGGCCAATCT ATCCTATTTC GATACGGAGG GCAATGTGCA GAGCGTGAGC GTGTCAGAGC TCACCAGGGG GAAGAAGGTG GTGCTATTTG CTGTTCCTGG GGCCTTCACC CCCACTTGTT
CCTCTAAGCA TTTGCCCGGG TTTGTGGCCA ACGCTGAGGA GCTTCGCAAG GCGGGCGTGG ACACCTTGGC TTGCGTCTCT GTGAACGACG CCTTTGTGAT GCAGGCATGG GCGAAGAGCG
TCGGTGCCGG CGACAAAGTG CTCATGCTGT CAGACGGTTT GGCCAAGTTT ACTCAGGCTT TAGGAACAAC TGTGGACTTG ACGGACAAGG TAGAGGGACT GGGCATTCGG TCGCGGCGGT
ATTCCATGCT CGTGGATGAC GGCGTGGTGA AGGTTTTGAA CTTGGAGGAA GGAGGCGCGT TCACTAGTAG CAGTGCTGAA GAAATTTTGA GCAGCTTGCA GAAGGCCAAT GCATAAAGAC
CTGTACATCT CTTTTTCTCT GGATTTGTGT ACAAGCTTTG TAAGTATCTC CCGAAGTTAT AATTCAGAAA CTCTACGGTT GTTCTGTGTG TACCATTTGT GTGTTTTTAA CAATCTTTAA
GTGGAGATTG CAACCTCAGA ATTTCGGATT ACGGAGGAAT TGGTCTTTAA ACTTGTCTGT TAAGGATCTT TCGGTGCTCG GCAAGGGTTC GTTCGACTCG TGTTCTACCT CGAAGGGTTT
TCCTCAACCC TCTTTCTTTG GAGTAAAACA ATGAGTGCTT CGAACACCGC TCTATGCCGC ACTCGTAGGA GATGATTATC TCAAATGAGC AGACCACTGT CGAGTTCAGT TTCGAAGCCT
CTATCCGAGG GGGTGTGAAA AAAAATCCTG TCGATGATAT TGAACCTTTT TCTATGTTTG TGTACAATTG TGACAGTGTT GAGTTGGTTG CGGGACGAGC AAAGCAGCGT TTGAGAACTG
TGTGTATGTA GGGTTGGACA GGTACTGGCC TGTGCGGTGC GTTGTATAAT TTAGTAGGAT ACAGTGAAGC AGACTGTTGC GAATTGCCCA GGGACGTGAA AATTAAGTCC TTGCTGGAAT
TTTGTAATAT CCTTGAGTGG CATTTGCATT ACGTCTATCT ATCCCCGTTC TTCAGAACCT GTTTCAGGCT TTAAATCTGA GAGCGCTTGA GCAGTTTCGT TCACTGAATT TTTGCCTTGT
GTTCGAATCT TGCTTGCAAT CAACTCATGC GTTGTTAAGA TTTATAGACT GAGCGAGATT AACACAATTG GTAGTCAGGG TTTGCATTAT CATCTATTTC ATCGTATTGA CTTCGCCTCC
GTGTAAGTTA AACAATGAGG ATTATAATGT TCAACTCATG TTTGAAGTCC TTCAAGCTCG TGATAACGCT GAACGGATCA ATCCTGCGTA AAAGTGCAAA ATCCACTGCC CGTATTCGAA
TGTGATTTTT CTGATATGCA TCGCCAAGAA GACAACACTG TATTCACATC TGGCGCTGGA GAATGCAGCT ACAGGTACTT TCAAGTTATT TCTTTTCTCA ACAGCACACG GAATGTCTCC
TGGAAACAGC CTACTTGAG
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Retrieve as FASTA
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