Entry information : PpaPrxII0501 (PpaPrxIIE01)
Entry ID 7427
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: PpaPrxII0501 (PpaPrxIIE01)
Name (synonym) PpaPrxII0501 (PpaPrxIIE01)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue types Gametophore
Protonema
Sporophyte
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrxII0501
start..stop
S start..stop
PpaPrxII0502 391 6.45e-140 1..248 1..251
PabPrxII178 261 7.32e-89 72..243 68..239
PtaPrxII05 257 4.79e-87 45..243 40..239
HaPrxII04 248 1.19e-83 60..243 32..213
Gene structure Fichier Exons


exon

Literature and cross-references PpaPrxII0501 (PpaPrxIIE01)
DNA ref. Phytozome 12:   scaffold_1 (1454912..1454166)
EST ref. GenBank:   FC446652.1 [5' end]  FC426229.1 [3' end]
Cluster/Prediction ref. UniGene:   Ppa.4231
Protein sequence: PpaPrxII0501 (PpaPrxIIE01)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   248
PWM (Da):   %s   25503.35  
PI (pH):   %s   8.96
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASAIASRVS SVGVVARREL ASSLTSKVPV ASLAVVARKA CLGTTQLLSS TSWLASCAGL KPAAKLATSS LSRSGVTQVM ATISVGDKLP EANLSYFDTE GNVQSVSVSE LTRGKKVVLF  AVPGAFTPTC SSKHLPGFVA NAEELRKAGV DTLACVSVND AFVMQAWAKS VGAGDKVLML SDGLAKFTQA LGTTVDLTDK VEGLGIRSRR YSMLVDDGVV KVLNLEEGGA FTSSSAEEIL 
SSLQKANA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no introns) and 40 ESTs. Incorrect prediction from Phytozome (5'end is missing) confirmed by ESTs
DNA
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CDS
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cDNA
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