Entry information : PtKat[P]04
Entry ID 7434
Creation 2010-07-09 (Christophe Dunand)
Last sequence changes 2012-08-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-08-13 (Qiang Li)
Peroxidase information: PtKat[P]04
Name PtKat[P]04
Class Catalase     [Orthogroup: Kat001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation Apoplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtKat[P]04
start..stop
S start..stop
PtKat03 521 0 24..371 5..356
PdelKat02 521 0 24..371 5..356
ThasKat03 514 0 24..371 5..356
SalpKat1 512 0 24..371 5..356
Literature and cross-references PtKat[P]04
DNA ref. Phytozome 12:   scaffold_7 (8037219..8023156)
Protein sequence: PtKat[P]04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   368
PWM (Da):   %s   41196.06  
PI (pH):   %s   8.57
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPYKVLILA MSLFKTNSCF CxxQHRSSSA YNSPFFTINS GASVRNNNSS LIVGSRGPIL LEDYHLVEKL FNFYR*RIPE RIHARGASAK GFFEVFHIIS PLTCADFVGA PGGQTPVIVR  FSxTVIHERG SPETLRDPRG FAVKFYFRHG NFDLVDNNSP VFFIRDGMKF xPDVVHALKA NTKSHVQENR RILDFFLHHH ESLHIFTFLL DDFGVPQDYR QNGRLGVHAY TLINKSGKAx  YVKFRWKPTC GVKFLLEDEA IKVGGSxxDL YDSIMAGSYP RKLFIQIMDL ADEDKFDFDP IDVTKTWPEG IWPS*LVGHL LVLKKNIDNF FAENEQPAFY PSIKVPGIY* SDDKLLQTRI 
FSYSDIQRHH L 

Retrieve as FASTA  
Remarks Pseudogene (chromo 7). Sequence contains several stop codons and frame shift. Large 3' end is missing.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATCCTT ACAAGGTACT AATTCTAGCT ATGTCCCTAT CTTTAATTCC TTAAAACAAA TTCTTGTTTC TGCTTAATAG AAGTTACAAA ATAATGGGTT TAATTTACTG GTCTAACAAA  ATTCCAACTT CATTTAATTT TCTCTATTGG GTTCTGTATA AAGTTTCAAT CTCTTGGATA TTTTTTTGGA CTCATTTTGA TGCAGCATCG TTCATCAAGT GCTTATAATT CTCCGTTCTT  CACTATTAAT TCTGGTGCTT CAGTTAGGAA CAATAACTCA TCACTTATTG TTGGTTCAAG AGGTAAAAGT TTGTTCTGCT TTGTGGAGTC CTTCATCATT TCTTGTTCAT TGTTGAGAGA  CCAAGTGATT TCTTGAGCTT TGATGGGGGT AATTCAAGAC CTTTTGGCTG AATTGGGTTT AGTACTTTCT CATTTATCTT ACTTGTGATT CATTGAGACC AAGTTAGTTT GTGAATACTA  TACAAAAAAA ACAAAATTAG AAATAGACCT TGTCTTTTGA CCGTCCAATT CTGCTTGAGG ACTATCATCT GGTGGAGAAA CTTTTTAATT TTTACAGGTA AAGAATCCCA GAACGTATTC  ATGCTAGAGG TGCTAGTGCA AAAGGGTTCT TTGAAGTGTT TCATATTATA TCTCCGCTCA CTTGTGCTGA TTTCGTTGGA GCCCCTGGAG GCCAGACCCC TGTGATTGTC AGGTTTTCTA  CTGTTATCCA TGAGCGCGGC AGTCCTGAAA CTCTAAGAGA CCCCAGAGGT TTTGCTGTGA AGTTCTACTT TGTTTTTTGT TCAAGGGCTT TGTGTTGTTT TTCCTCGTCC TTATTTTTTT  TCCCCTTTCT GTCATTGAAG ATTTACATGA ATTGGTAAAT GGTATTGTAT GTCTGTTGGA AGTCTATCAT TTATGTTGCA TCAATTACTC AGGATTGTCT TGCTGTTTTG TTGCTCAATA  TACAATTAAT ATGGCATGTT AAATGCATGT ATAGGGTATT GATTATGACT TGTTTGTCGA TCAATATACG ACGGGGATTG ATTACTACAT CTCATACTAA TATACTTTCC ATTATAGCAT  GGGTTATATT GATTGTGCAT TTGAAGTTAT TGACTGGAAG GTTCACCTGA TTTCTGCTTT CGTTTTTCCC AACACGGAAA TTTTGATCTA GTCGACAACA ATTCCCCAGT CTTCTTCATT  CGTGATGGGA TGAAGTTCCC TGATGTGGTT CATGCTCTTA AGGCCAACAC TAAGTCACAC GTTCAGGAAA ACCGGAGAAT ACTTGACTTC TTCTTACACC ATCATGAGAG CTTGCACATT  TTCACCTTCC TGCTTGATGA CTTTGGTGTT CCACAAGATT ACAGGCAAAA TGGAAGGCTT GGTGTGCACG CCTATACTCT AATCAACAAG TCTGGGAAGG CATACGTGAA ATTCCGTTGG  AAACCAACTT GTGGGGTTAA GTTTTTATTG GAAGATGAGG CCATAAAAGT TGGTGGATCT CTACGACTCC ATCATGGCTG GAAGCTACCC CCGAGTAGAA AGCTTTTCAT TCAAATAATG  GATCTTGCTG ATGAAGACAA GTTTGACTTT GACCCCATTG ATGTGACCAA GACTTTGGCC TGAAGGCATC TGGCCTTCGT AGCTTGTGGG CCACTTATGG TGTGTTTTGG AATGCAAGGC  AAACTGAGTT CTCAAAAATT TTAAAAAATG GTTTTTTTGT TTAAAATGAA AAAAAAAATT ATGTTTTCAG ATTGTTTTGA TGTGCTGATG TCAAAAATAA TTTTTAAAAA ATAAAAAAAA  CTTCATTTTA ATGCATTTCT AAGTGAAAAA CACTTTGAAC CATCACTATT ACAATCTTAA ACAAGCTCTT AGTGTTGAAG AAGAATATTG ATAACTTCTT TGCCGAGAAT GAGCAGCCTG 
CATTTTACCC TTCTATCAAA GTGCCTGGTA TCTACTAGTC AGATGACAAG TTGCTACAAA CTAGAATCTT CTCGTATTCT GATATTCAAA GGCATCACCT T 

Retrieve as FASTA