Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
106 |
PWM (Da): |
11551.64 |
|
PI (pH):
| 6.08 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GEVVAGSATA AAWPGLQVGF YHAKCPVAED VVLGEMRMIL EEDPTLAPSL HRMHYHDCFV QGCDVSIMLR SRSGKGERDA TPNRSMRGYD AINQIKERLE SICPLT
|
Retrieve as FASTA
|
|
Remarks |
Pseudogene. Sequence from genomic (chromo 4, intron 1). PS and exons 3 and 4 are missing. Incorrect prediction from Phytozome (annotated as Peroxidase with all the missing part) |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTCGGTGAGG TCGTCGCAGG TTCGGCGACG GCAGCGGCGT GGCCCGGGCT GCAGGTGGGG TTCTACCATG CCAAGTGCCC TGTCGCGGAG GACGTCGTGC TGGGCGAGAT GAGGATGATC
CTCGAGGAGG ATCCCACGCT CGCGCCGTCT CTGCACCGGA TGCATTACCA CGACTGCTTT GTCCAGGTAA TTAACAATTT TAATTGCCCA GGCTCAAGCT ACTTCCTGCT CGTCCATGGC
TATCGATCAT CTGAGTGTTG GTTGCAGGGG TGTGACGTAT CGATTATGCT GAGGTCGAGG AGCGGAAAGG GGGAGAGGGA CGCGACGCCC AACCGGAGCA TGCGAGGCTA CGACGCCATC
AATCAGATCA AGGAGAGGCT GGAGAGCATC TGCCCGCTCA CCT
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTCGGTGAGG TCGTCGCAGG TTCGGCGACG GCAGCGGCGT GGCCCGGGCT GCAGTGGCCC GGGCTGCAGG TGGGGTTCTA CCATGCCAAG TGCCCTGTCG CGGAGGACGT CGTGCTGGGC
GAGATGAGGA TGATCCTCGA GGAGGATCCC ACGCTCGCGC CGTCTCTGCA CCGGATGCAT TACCACGACT GCTTTGTCCA GGGGTGTGAC GTATCGATTA TGCTGAGGTC GAGGAGCGGA
AAGGGGGAGA GGGACGCGAC GCCCAACCGG AGCATGCGAG GCTACGACGC CATCAATCAG ATCAAGGAGA GGCTGGAGAG CATCTGCCCG CTCACCT
|
Retrieve as FASTA
|
|