Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
116 |
PWM (Da): |
12137.16 |
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PI (pH):
| 8.52 |
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Sequence 165
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
APTLAAAILRLHFHDCFVRGCDASVLLSSTHGVGGNNMAERDAPPNRSLRGFVSVQRVKSRLEAACPSTVSCADILALMARDAVLLASGPYWPVPLGRRDGRVSCAAEVMSPSNIV* |
Retrieve as FASTA
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Remarks |
Pseudogene. Sequence from genomic (chromo 1, intron 1). PS, end of exon 3 and exon 4 are missing. Incorrect prediction from Phytozome (annotated as peroxidase with all the missing part) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCCCCCACCCTCGCCGCCGCCATCCTCAGGCTCCACTTCCACGACTGCTTCGTCAGGGTATTATACATAGATGACTTATATATATAGTAGTTTTCTTCTGCTCTAATACTAGCTACTCCG TATATGCTGATCTGAATGCATGGATTGGGATTGCAGGGTTGCGACGCCTCCGTGCTGCTGAGCTCCACCCACGGCGTCGGCGGCAACAACATGGCCGAGCGGGACGCACCACCCAACCGG AGCCTGCGCGGCTTCGTCTCCGTCCAAAGGGTCAAGTCCAGGCTCGAGGCCGCCTGCCCCTCCACCGTCTCCTGCGCCGACATCCTCGCCCTCATGGCCCGTGACGCTGTCCTCCTCGCC AGTGGACCCTACTGGCCCGTTCCGCTCGGCCGGAGGGACGGCCGCGTCTCCTGCGCCGCTGAGGTTATGTCTCCATCCAATATCGTTTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCCCCCACCCTCGCCGCCGCCATCCTCAGGCTCCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGCCTCCGTGCTGCTGAGCTCCACCCACGGCGTCGGCGGCAACAACATGGCCGAG CGGGACGCACCACCCAACCGGAGCCTGCGCGGCTTCGTCTCCGTCCAAAGGGTCAAGTCCAGGCTCGAGGCCGCCTGCCCCTCCACCGTCTCCTGCGCCGACATCCTCGCCCTCATGGCC CGTGACGCTGTCCTCCTCGCCAGTGGACCCTACTGGCCCGTTCCGCTCGGCCGGAGGGACGGCCGCGTCTCCTGCGCCGCTGAGGTTATGTCTCCATCCAATATCGTTTAG |
Retrieve as FASTA
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