Entry information : TaAPx-Rd
Entry ID 7458
Creation 2010-08-06 (Christophe Dunand)
Last sequence changes 2010-08-06 (Christophe Dunand)
Sequence status partial
Reviewer Catherine Mathe
Last annotation changes 2011-08-23 (Catherine Mathe)
Peroxidase information: TaAPx-Rd
Name TaAPx-Rd
Class Ascorbate peroxidase related     [Orthogroup: APx-R001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Triticum
Organism Triticum aestivum (bread wheat)    [TaxId: 4565 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TaAPx-Rd
start..stop
S start..stop
TaAPx-Ra 368 5e-130 1..209 1..217
HvAPx-R 365 9e-129 1..209 1..216
TaAPx-Rb 356 6e-127 1..209 1..212
FarAPx-R 336 1e-117 1..209 1..216
Literature and cross-references TaAPx-Rd
Protein sequence: TaAPx-Rd
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   209
PWM (Da):   %s   22178.31  
PI (pH):   %s   7.87
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MELTNIPHLA SSSSFFFSSC RSRRRTGRAV ITALAASSRC SADSACPEPI EQQNIDNLSG PANTQCYRRR DFAAVALLPF LLPHVDMASA ADSYDGSIIQ NGVRNVLSKV KAAGVLRLVF 
HDAGTFDISD KSGGMNGSII YEADRPENAG LSKSLKILRK AKEGIDQVQQ VSWADLIAVA GAEAVALCGR PEIPIRLGRL DSSTADPTG 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs + CA680139. 3' end is missing. Incorrect compile from JGI.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTGGTACCC GGGATTCGGC CATTACGGCC GGGGCTTCCA TTTCAGGGCA CCTGCAACCA TTACCGGCAT TCAAACAAGG CAAGCAGGAA CAAGATGGAG CTCACCAACA TCCCCCATCT  TGCCTCCTCC TCCAGCTTCT TCTTCTCCAG CTGCCGGAGT AGAAGAAGAA CAGGGAGGGC TGTGATAACA GCGCTTGCTG CTAGTAGTAG GTGCAGTGCT GATTCTGCAT GCCCAGAGCC  CATTGAACAG CAAAATATAG ACAACCTTTC AGGTCCTGCA AATACCCAAT GTTATAGAAG GCGAGATTTT GCTGCTGTTG CTCTGCTCCC TTTTCTACTT CCTCATGTTG ATATGGCGAG  TGCAGCTGAC TCATATGATG GATCAATTAT TCAAAACGGT GTGAGGAATG TCTTATCCAA GGTGAAAGCA GCTGGCGTGC TTCGTTTGGT TTTCCATGAT GCAGGGACTT TTGACATTAG  TGACAAATCA GGTGGCATGA ATGGCTCCAT AATCTATGAA GCTGACAGAC CTGAAAATGC AGGACTTAGT AAATCCTTAA AGATACTACG AAAAGCAAAA GAAGGGATCG ACCAGGTTCA  GCAAGTGTCA TGGGCGGACT TGATCGCAGT GGCTGGTGCT GAAGCAGTTG CACTCTGTGG AAGGCCTGAA ATTCCCATAA GATTAGGCCG TTTAGATTCC AGTACTGCTG ATCCGACCGG 

Retrieve as FASTA