Entry information : CsaAPx-R (Cucsa.162470.1)
Entry ID 7461
Creation 2010-08-09 (Christophe Dunand)
Last sequence changes 2011-07-28 (Catherine Mathe)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CsaAPx-R (Cucsa.162470.1)
Name (synonym) CsaAPx-R (Cucsa.162470.1)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis
Organism Cucumis sativus    [TaxId: 3659 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsaAPx-R
start..stop
S start..stop
VvAPx-R 415 9.56e-147 1..317 1..329
CsAPx-R 400 8.51e-141 1..317 1..334
CclAPx-R 399 3.13e-140 12..317 12..334
GhAPx-R 396 4.47e-139 48..317 65..333
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7461' 'complement(join(2091809..2091908,2092158..2092224,2092544..2092665,2093251..2093334,2093822..2093918,2094034..2094076,2094157..2094227,2094497..2094633,2094788..2094873,2095148..2095294))' Exons


exon

Literature and cross-references CsaAPx-R (Cucsa.162470.1)
DNA ref. Phytozome 12:   scaffold01144 (2095294..2091809)
Protein sequence: CsaAPx-R (Cucsa.162470.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317
PWM (Da):   %s   34584.96  
PI (pH):   %s   8.08
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTSTFFNPAPSCNVAVISSSFLRFKFIPKFPTTIPSSSVSTVSFRAKTTKREFVFSAALPFLLILHESVEGFKAEAAEGRRLDKTEVERIREEVRKVVTKGRAPGLLRLVFHDAGTFETN
DT
GGMNGSIVHELDRPENKGLKKSVILQEAKSTLDLIRPVSWADVIVVAGAEAVSICGGPSIAVDLGRLDSEKPDPEGKLPEESLDAVGLKQSFSRKGFSTRELVALSGAHTIGGKGFGS
PVVFDNAYFKILLEKPWSS
GGMSSMIGLPSDRALADDDECLRWIKEYAKDQNVFFEDFHNAYIKLVNSGAKWRS

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns). Incorrect prediction from Phytozome ( first 2 exons are missing). No EST.
DNA
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CDS
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