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Entry information : AlyDiOx02
Entry ID 7463
Creation 2010-08-10 (Christophe Dunand)
Last sequence changes 2010-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyDiOx02
Name AlyDiOx02
Class Alpha-dioxygenase    [Orthogroup: DiOx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyDiOx02
start..stop		 S start..stop
AtDiOx02 1278 0 1..631 1..631
NoffDiOx02-1B 1229 0 1..631 1..631
TsDiOx02 1215 0 1..631 1..631
NoffDiOx02-1A 1206 0 1..631 1..632
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7463' 'complement(join(15947095..15947320,15947413..15947656,15947741..15947943,15948026..15948399,15948537..15948750,15948841..15948971,15949075..15949224,15949763..15950023,15950191..15950283))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 15950191..15950283 91 N° 2 15949763..15950023 259 N° 3 15949075..15949224 148 N° 4 15948841..15948971 129
N° 5 15948537..15948750 212 N° 6 15948026..15948399 372 N° 7 15947741..15947943 201 N° 8 15947413..15947656 242
N° 9 15947095..15947320 224  
complement(join(15947095..15947320,15947413..15947656,15947741..15947943,1594802 6..15948399,15948537..15948750,15948841..15948971,15949075..15949224,15949763..1 5950023,15950191..15950283))


exon

Literature and cross-references AlyDiOx02
DNA ref. Phytozome 12:   scaffold_2 (15950283..15947095)
Protein sequence: AlyDiOx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   631
PWM (Da):   %s   72052.47  
PI (pH):   %s   6.62
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGFSPSSSWFLHPQLHHVVSEMSYFDAFIFYIVHLVDKLGLWHRFPVLLGVAYLGLRRHLHQRYNLVHVGPINGQGYDNDEFCYRTADGKCNHPSDDSIGSQGSFIGRNMPPSTSQYGIL
DPHPSVVATKLLARKRFIDNGDQFNVIACSWIQFMIHDWVDHLEDTHQIELEAPEEVASGCPLKSFKFLRTKKVPTGDHHKSGAVNTRTPWWDGSVIYGNDEAGMRRVRVFKDGKLKISG
DGLLERDERGVPISGDIRNSWSGFSLLQALFVKEHNSICDMLERYPDFDDEKLYRTARLVTAAVIAKVHTIDWTIELLKTDTLTAGMRINWYGFLGKKVKDMVGARFGPIFSGLVGLKKP
KDHGVPYSLTEEFVSVYRMHCLLPETLILRDMKSENVDKANPAIEREIPMTELIGKEAGLKGSKIGFEQLLVSMGHQSCGALTLWNYPNWMRNLVAQDIDGEDRPHLIDMAALIYRDRER
GVPRYNEFRKNLLMSPISKWEELTDDEEAIKVLREVYEDDIEKLDLNVGLHAEKKIKGFAISETAFFIFLLVASRRLEADRFFTTNFNEKTYTKEGLEWVNTTETLKDVIDRHFPSLTDQ
WMRCSSAFSVWGSDPNPNTWVPLYLRSAP

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 8 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTTCTCTCCATCTTCTTCATGGTTTCTTCATCCTCAGCTTCATCATGTTGTTTCCGAGATGTCTTACTTTGATGCTTTTATATTCTATGTAAATATATACATCTCTCTCTTTGAC
AAAAAAATAAATACATCTCTCTCTATCTCTCTAAAATATATATGAACTCTTCTCTTAAGAAAATATTAATCATATAATTTTTGTAAACTTTTTATTATTATTTGGTTAATTTGATTGTTT
TTCAATTTTTATATTTATAGATATTGTGCACTTAGTGGACAAGCTAGGATTGTGGCATAGATTTCCAGTGTTATTAGGAGTGGCTTACTTGGGGTTACGAAGACATCTACATCAACGTTA
CAATCTGGTACATGTCGGTCCGATCAACGGTCAGGGTTACGACAACGATGAGTTCTGTTATCGGACGGCTGACGGCAAGTGTAATCATCCCTCCGACGACTCCATCGGCAGTCAAGGCAG
CTTCATCGGCCGGAATATGCCTCCCTCTACTTCTCAGTACGGCGTAAGTTTTTTCTTGGTCTCCTTCATATTCACAATTACTATTTCATAACATGCAAATTAAATTTGCAAACTTAGATT
TGTACTTTTGATTAAATTTTAATATAAAGCGAAGTGATAATATAGCAAAAATAAATAGTAGCGGAATGAAACACTAGAACCAAATTTTGTGACGTATTTCTTTTTAATCTCTACTAACCG
GTGGTTGAAAGCATGATGTAATTCTCTTCTGTGTTTATTTTATTTTGTCGATTTTTGATTGATTTTAAGTGTACATTGATTTTTTTTGTCAAAGTTTTTTTGTCAATACTTATTTCACTG
AAAATTTTAGAAAAAAACTTAAAAAATTGTTGGAGCTTTAGTATTATTGGGGCGGAGGCGGACATACCTCATGAGAGCCACCATAATTGTATTTCTGTTGTTTTTGCATGATTAGTAATA
CATCTACGGAATTATGTTATGAATTACATTAGTATGATGAGTAAATGCACAACGGCTTGATACATATATTTTATATAATATAATATTGTGTATCATGACAGATATTTTGGATCCACATCC
AAGTGTAGTGGCGACAAAGTTGTTAGCGAGAAAAAGATTCATAGACAATGGGGACCAATTCAACGTGATAGCTTGTTCTTGGATCCAGTTCATGATCCATGATTGGGTTGATCACTTAGA
AGACACCCACCAGGTTTATAATATTTTCAAATTTAACCCCTTTAATCTCAAAGATTTACATTTCTTTCCCTCAACTTTAGATTATAGAACAATAAAGATATTGAAACCTCAACCAGATAT
TGAGCTTGAAGCTCCAGAAGAAGTAGCAAGTGGATGTCCATTGAAGTCATTCAAGTTCCTCAGAACGAAGAAAGTTCCCACCGGTGATCACCACAAATCTGGCGCTGTCAACACTAGAAC
CCCTTGGTGGTTAGTATCTCAATCATTAGTCACTGCTTAATTGTTGTTTAATTACTATATATCCGAGTTCGATTTTACAAAACATTATATTGGGGATAGGGGGATGGGAGTGTAATATAT
GGGAATGACGAAGCCGGAATGAGAAGAGTTAGGGTTTTCAAGGACGGAAAGCTAAAAATCTCTGGGGATGGCTTGTTGGAGAGGGACGAAAGAGGTGTTCCTATCTCCGGTGACATAAGA
AACAGCTGGTCAGGTTTCTCTCTGTTGCAAGCTCTCTTTGTGAAAGAACATAACTCTATCTGTGATATGCTCAAAGTAAGTCATTAAATTGATCCTATAACTACGTTTTGCCTCTTTCTT
GTGCTGCAAGCAGCAACTCTGTCTTTTTTCTTCTTCTTCTTTTTAGCAACTCTGTTTATGCACAATCATATTAAGTTTTAACATTTTTTCAGGAGAACGGTATCCAGATTTTGATGATGA
GAAACTCTACCGGACTGCTAGACTGGTGACTGCAGCGGTTATCGCTAAGGTTCATACAATCGATTGGACAATAGAACTCTTGAAAACAGACACACTCACTGCTGGAATGAGGATCAACTG
GTATGGGTTTTTAGGGAAGAAAGTGAAGGACATGGTCGGAGCAAGATTTGGTCCTATATTTAGCGGCTTAGTTGGTCTGAAGAAACCGAAAGATCATGGAGTTCCTTATTCCCTTACCGA
AGAGTTCGTTAGTGTTTACAGGATGCATTGTCTTCTACCAGAGACACTTATCCTCCGAGATATGAAATCTGAGAATGTTGACAAAGCAAACCCTGCAATAGAACGAGAGTAAGATATAGG
ATGTTTGGTACATTTTTTTAGGTCAATCCAAGCACGGTTTTTCTTGACCTATAAAGTTTTTTTTTTACAGGAGATACCGATGACGGAACTGATTGGGAAAGAAGCAGGACTAAAGGGTTC
GAAAATTGGGTTTGAGCAATTACTTGTTTCAATGGGACACCAATCTTGTGGGGCATTGACATTGTGGAATTACCCTAATTGGATGAGGAACCTTGTGGCTCAAGATATCGACGGAGAAGA
TAGACCTCACCTTATAGATATGGCTGCCTTGGAGAGTAAGTCAAAATTAATTCTTCTTCTTCTTCTATACATCAGCAATGCTCAACCGATTGATTGATCTGATTTGATTTTGTTCTCAGT
TTTTATAGAGATCGGGAGAGAGGAGTTCCTCGGTACAACGAATTCAGAAAGAATCTGTTGATGAGTCCGATCAGCAAATGGGAAGAGTTGACAGATGATGAAGAAGCTATCAAGGTTTTA
AGAGAAGTGTACGAAGACGATATAGAGAAGCTTGACCTTAACGTGGGACTGCACGCAGAGAAGAAGATCAAAGGATTCGCCATCAGCGAAACAGCTTTCTTCATCTTTCTCCTCGTCGCC
TCCAGGTTTTTAAATTCCTCAATAATACTACATTTTGTTAAAACAGAGTATTTTCTTGTGTAACAAGGAAACTTACTTGGACTTCAATTTTTTTAAGGAGAGGCTAGAAGCAGATAGGTT
TTTCACGACGAACTTCAACGAGAAGACGTATACTAAAGAAGGATTAGAGTGGGTCAATACTACAGAGACTTTAAAAGATGTAATAGACAGACACTTCCCAAGCTTAACCGATCAATGGAT
GCGATGTTCTAGCGCCTTCTCTGTCTGGGGCTCGGATCCTAACCCAAACACTTGGGTTCCTTTGTACCTCCGATCCGCTCCATAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTTCTCTCCATCTTCTTCATGGTTTCTTCATCCTCAGCTTCATCATGTTGTTTCCGAGATGTCTTACTTTGATGCTTTTATATTCTATATTGTGCACTTAGTGGACAAGCTAGGA
TTGTGGCATAGATTTCCAGTGTTATTAGGAGTGGCTTACTTGGGGTTACGAAGACATCTACATCAACGTTACAATCTGGTACATGTCGGTCCGATCAACGGTCAGGGTTACGACAACGAT
GAGTTCTGTTATCGGACGGCTGACGGCAAGTGTAATCATCCCTCCGACGACTCCATCGGCAGTCAAGGCAGCTTCATCGGCCGGAATATGCCTCCCTCTACTTCTCAGTACGGCATTTTG
GATCCACATCCAAGTGTAGTGGCGACAAAGTTGTTAGCGAGAAAAAGATTCATAGACAATGGGGACCAATTCAACGTGATAGCTTGTTCTTGGATCCAGTTCATGATCCATGATTGGGTT
GATCACTTAGAAGACACCCACCAGATTGAGCTTGAAGCTCCAGAAGAAGTAGCAAGTGGATGTCCATTGAAGTCATTCAAGTTCCTCAGAACGAAGAAAGTTCCCACCGGTGATCACCAC
AAATCTGGCGCTGTCAACACTAGAACCCCTTGGTGGGATGGGAGTGTAATATATGGGAATGACGAAGCCGGAATGAGAAGAGTTAGGGTTTTCAAGGACGGAAAGCTAAAAATCTCTGGG
GATGGCTTGTTGGAGAGGGACGAAAGAGGTGTTCCTATCTCCGGTGACATAAGAAACAGCTGGTCAGGTTTCTCTCTGTTGCAAGCTCTCTTTGTGAAAGAACATAACTCTATCTGTGAT
ATGCTCAAAGAACGGTATCCAGATTTTGATGATGAGAAACTCTACCGGACTGCTAGACTGGTGACTGCAGCGGTTATCGCTAAGGTTCATACAATCGATTGGACAATAGAACTCTTGAAA
ACAGACACACTCACTGCTGGAATGAGGATCAACTGGTATGGGTTTTTAGGGAAGAAAGTGAAGGACATGGTCGGAGCAAGATTTGGTCCTATATTTAGCGGCTTAGTTGGTCTGAAGAAA
CCGAAAGATCATGGAGTTCCTTATTCCCTTACCGAAGAGTTCGTTAGTGTTTACAGGATGCATTGTCTTCTACCAGAGACACTTATCCTCCGAGATATGAAATCTGAGAATGTTGACAAA
GCAAACCCTGCAATAGAACGAGAGATACCGATGACGGAACTGATTGGGAAAGAAGCAGGACTAAAGGGTTCGAAAATTGGGTTTGAGCAATTACTTGTTTCAATGGGACACCAATCTTGT
GGGGCATTGACATTGTGGAATTACCCTAATTGGATGAGGAACCTTGTGGCTCAAGATATCGACGGAGAAGATAGACCTCACCTTATAGATATGGCTGCCTTGGAGATTTATAGAGATCGG
GAGAGAGGAGTTCCTCGGTACAACGAATTCAGAAAGAATCTGTTGATGAGTCCGATCAGCAAATGGGAAGAGTTGACAGATGATGAAGAAGCTATCAAGGTTTTAAGAGAAGTGTACGAA
GACGATATAGAGAAGCTTGACCTTAACGTGGGACTGCACGCAGAGAAGAAGATCAAAGGATTCGCCATCAGCGAAACAGCTTTCTTCATCTTTCTCCTCGTCGCCTCCAGGAGGCTAGAA
GCAGATAGGTTTTTCACGACGAACTTCAACGAGAAGACGTATACTAAAGAAGGATTAGAGTGGGTCAATACTACAGAGACTTTAAAAGATGTAATAGACAGACACTTCCCAAGCTTAACC
GATCAATGGATGCGATGTTCTAGCGCCTTCTCTGTCTGGGGCTCGGATCCTAACCCAAACACTTGGGTTCCTTTGTACCTCCGATCCGCTCCATAG

Retrieve as FASTA