View Redoxidase 7471

Entry information : Aly2CysPrx

Entry ID	7471
Creation	2010-08-10 (Christophe Dunand)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-04 (Achraf Jemmat)

Peroxidase information: Aly2CysPrx

Name

Aly2CysPrx

Class

Typical 2-Cysteine peroxiredoxin [Orthogroup: 2CysPrx001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis lyrata [TaxId: 59689 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	Aly2CysPrx start..stop	S start..stop
Bn2CysPrxB-2_other	448	9.71e-162	1..264	1..262
Bn2CysPrxB-1_other	438	1.16e-157	1..264	1..270
Thas2CysPrx02	437	4.67e-157	2..264	23..278
At2CysPrx02	436	6.25e-157	50..264	59..273

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2360169..2360369	199	N° 2	2360696..2360770	73	N° 3	2360891..2360972	80	N° 4	2361059..2361138	78
N° 5	2361334..2361459	124	N° 6	2361583..2361696	112	N° 7	2361804..2361920	115
join(2360169..2360369,2360696..2360770,2360891..2360972,2361059..2361138,2361334 ..2361459,2361583..2361696,2361804..2361920)

Literature and cross-references Aly2CysPrx

DNA ref.	Phytozome 12: scaffold_6 (2360169..2361920)

Protein sequence: Aly2CysPrx

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	264
PWM (Da):	28995.03
PI (pH):	5.89

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASIASSSTTTLISSSRVLLPSKSSLLSPAVSFPRTFASSSSGFSRLVPLTSRLSASRRSFVVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTE
ITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCP
AGWKPGEKSMKPDPKLSKEYFSAI*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 6, 6 introns).

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

nnnnnnnnnn nnnnnCTTAT TCTCATAACC ATCTTATCAA GAATTCGATT CGATTTGCAG GATCTTGGTG GCTCTTCTTA CTGTTTTCGA AAGGATAGGA GACATCATTG TATCATGGTT AGTACTACTT AGTAGTAGAT CATTTGATAC TTTTGTATCA AACCTTTTGA TTCATCTAAC CGTAGGTTAC CACTCTACGG TGAGATCAAA ATCGCTCTTC TCGTCTACTT ATGGTACCCG AAATCACAGG TCATACTACA ATGCAAGAAA AATCTCATGA GCATTCATTC TTTGATTCAC AAAACCAATC TTCTTCTCTT GGTTTCTGAC AGGGACTTAG CTATGTCTAT GAGAAGCTAC TATGTCCATA CATGTCAAAG CATGAATCGG ACATCGATCA AGGAATCTCC GTCTTAAAGA TAAGAGGACA TTTAGTAATT GCTCAACTAC TGCAATGTGG CTTCCACTGG AGCCTCCAAA TCTTCAAGCA ATTGCAACAA CAATTCACCA TCGATAAGGT TTAAAACAAA CATATACATT CTCAAATCCC ATTTCATGAA ATCAAGAAGC TACTCTCACC AAATCCTTTC ACTTCTTTAT CTGCAGAATA ATAACCCATC AAAGTCAAAA GATCAACCAC AAACAAGAAC TTCGTTTATG TTTCTCCGTT AGAAGATACT GCTCTACTCT AAGCCACAAT CTCAATAACC GGGTTTTTAT CCGCCGGTTC ACCGGAATTG GCAGCCAAAC CGGAGTTTCT ACATGATTCA GAGTTCAGAT TGACCTGACC ACTACTAATA ATTGACGAAC GAAAGAAAAA GATTTTGAAG AATTCAGAAA TCGAATTTTT TTCATTTTAC ATATTTTGAA TTTTATTGTA TACAAACAGA TTTTTGTTCA ATTCATGAAA TCCAATTATT ATCCAATTTC TCTTCGAGAA TTTTATCCCC AAATCAAAAT TTATATGAAC TATTTGACAA TCAAAGGAAC ACGAATCGAT TGAAAAATCC AATCAAATAC ACGTCTCAAG AACCGAATTC CGGCGGATAA ATGAATCCAT ACACGGCGGA GGAATTGAGA ACCAGCAGAA TCCTCCGACG AAGTAAGCAC CGTTGGTTGA AGATAAGACA AAGCAGCTTT CTTAACGAGA CGGTTACGAA TCGAGATATC TCCGGCGGTG GATGTAACCG GAGAGAAGCT ACCGTTGATC GTCGGTAAAT TGAGTGAAGA GTTACTCGGA GAAGAGATGA TATCTCTGAG AGAAGTGTAA GCTACGAAAG AGGATGGTTT TATGGAGATG AGCTCATAAT CGAACGAAGA CGGCGGCGTT GAAGCCATGT CGAAAGGGAT TTCGGGAGGA GTCAAAGTCG TCATGGTGGA TATGGATTTT GTACGACGGA GTGGCGTCGC CGGAGATTGT GACGGCGGAA TCTCCATAGT CTTCTCTTTT TGTTTTTGTG GCTGATTAGG TTTGTGAGTG TGTAAATAAG GAGGTTCAAT AATTGATCTC TATAATATGA ACATTAGTCA CTATCTTGTG TATATTATTA ATACTTAATT TGTATTTTCT TAATTATTAT GATTGGAAGA TAGACAAATT ACAAAATTTA AGGATTGTTT ACTATTCTTT GTCCATTATT CTATTTTTGA TGAGAAGATT AGATGGAAAT ATATTCGGAA TCCAACCAAC ATAATGAAAA CCAATGTAGA CTTTTTAACA TTTTGATATA CTACTAATTA TTAAAGTATG ATGATCCACT TATTCACTTA CCGCGTCAAA CGGTGTCGTT CCGGTACATC GAACATTCCA CTGCTTTTCA ACTGTACTAA AGAAAAATCT AGAAACAGCA TTTGGTTTCT CTCTATCCGC TTTGTCTCTC TCTCTCACGC CCTCACGTTT GTCCACCTCA TCATAATCGA
AACCAATCAC AAGAACCCTT TTTTAGAGTA CTGTAACTAG TGACGCGGAG AGAGAGAGAA CACAGTCACA GAGTTATGTC A

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AAGCTAAAAC TGAACAATTG TTTGGTGAAA ATTTGCAAGC AGAGTTGTTT TATTAATCTT TTCTAAGTTG GAGCAGAGTT GTTAATTTTC GCCAAAGAAC CTTTGTATCT CATTTTTCTG CTATGTGATT CTCCTGAAAT TGAATAAAAG ATAAAAATAA ATCTTCTCTT TCTTTTTTCC AATGTTGATG TCTTTCACTT CTGTAAATAG TTTATACTAA TCCAAAGAGG CAGAGTATTT GACCAAGGCA ACATAAATTA GAAAAATAAC ATGTGAGGTC ACAGGTCTCT GGAATTAGAC AACTATCTGA TTGATTTGTT TAATAAACTT GAGTGCTCAT TAAGCTAATC TCCATCTTTA GCCGACAACA AAATTAAGTT GTAGTATACG TATTACACGG AATATTCTAC AATCGGATTA CTAAAAAATT ATCGTATGAT AACTTTCGTT AAAAGAAAAA TTTTGAATTC TTAAAATAAA TATATCTTGA CACGAGAAAA AAGGAAAAAC ACAATAGAAG GTATGAATAA AAAATATTAG AACCAAAAAA AGAAAAGGAT CGTTTTGTCA TTTGTTGATA ATAGGCCCTA CCCTTCATTT TTTCCATTAA ACCAAAATGT ACAAAGACAA GTGGGGATGA TGGGGTTTGG TATATACGCG GTTAGCAGTT ACCCACGTGG TTTATCCACT TCACACATTT AACCACCCCT ACAAAATAAT GTTATCAAAA CGACCCCAAT ACTTTCTTTT GTCTTCTTTC CGACCTTTCC TTCTGATGTT AAAAAACTTT AATTCCGCTG TACACTGCTT TTACCCAAAA ATAAACTCCC CATATTATAT TCTTACGTAG CGGTAGCAAC CTCCGAACCC GGTACATAGC TGAGCCGGTC CACTTCATCC CAAACCAATT TCGAGGTTAT CTCATCGAAC TCCGGTTCAT ATTCCTACAA CAACATGAAC
CATGTCCACA AGTATATATT GGTATGAGAC TTTCGATTG

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTCTATAGCTTCTTCTTCCACCACCACCCTTATCTCTTCCTCTAGGGTTCTTCTTCCCTCCAAGTCTTCTCTTTTATCTCCCGCCGTGTCTTTCCCCCGAACCTTCGCATCATCC
TCTTCCGGATTCTCTCGTCTCGTTCCCCTAACCTCCAGACTCTCCGCCTCACGCCGGAGCTTCGTCGTCAAGGCACAGGCTCTGTAAGTTGACTCGCATTGCCATCAATTTATCGTATTT
GCTCCCTGTTTTGGGTTTTGAGATCTTTGGATAAAAAACTAAACTTTTTAGAGTTCTGCAACTGTGGAAGTCTTGAATTGAGCGACATTTTGATTACCCTTCTTTTTGAATTACTGTAAT
TGCAAATGGAGAAAGTGCCCTGAATTTTGTATAATTGACTCATACACAGAAATCTTTTGAGCCGTACTTAGCGAAATAAGACCAGCTAAAGCCTAAAGCGCTTATTTTTGTGGCAGAAGT
TAACAACTTTATGATCAATGTGTGACGAGTTTTATGAATTCAGGATGATTTACCATTGGTCGGTAATAAGGCGCCTGATTTTGAGGCAGAGGCAGTTTTTGATCAAGAGTTTATAAAGGT
ACTTTTTCACTCCATATAACCTTCTTTAACATGTGTTTAGACCAATTCTGGTGCTTCCAGTAGCTTAGGTCAATGCAGTAGAGGAATGTTGTGATAGTAATCGACCTATTATGGTTTCAG
GTGAAGCTCTCTGAGTACATTGGGAAAAAGTACGTGATTCTATTTTTCTACCCATTGGACTTCACTTTCGTTTGCCCCACAGGTTAGTGTATTGCTGAGGAAATAGCTTCAAAACTGAAA
CTCTCGCCTCAAAGTCACTGAATTTTCCTATTTTTCTTTGCTTATTCTAGAGATTACTGCCTTCAGTGACCGTTATGAAGAATTTGAGAAGCTAAACACCGAAGTATTAGGGGTCTCAGT
CGACAGTGTGGTATAGAGTATTTATATTTTCTCCCCCTGACCCTTGTGGTCTCAGCATTTTGAGAAATGGTTTTAAGTATTTGATGGACATAAGTTGGAATTTGAAAATGGCTAATTTTA
GTCCTAGCTTTGGCAAGTGGCAGTCTGATAATCAATTGATCTCATTTTCTTTTGGATAATGCAACGCTTGATTCAATGTTCATGTAGTTCTCGCATCTCGCGTGGGTCCAAACAGACAGA
AAATCGGGTGGGCTCGGTGATCTGAATTACCCGCTTGTTTCAGATATCACTAAATCCATTTCAAAATCGTTTGGAGTGCTCATCCCTGACCAGGTAAACACGATTTCTTCCCACATAGTT
GCATCTACTTGCATTGAGTCCAATCCACTTGTGTTCTTTAAAGTAGCAACAACTTTCAGCCACTTTGAATTGAAGCATTTTGCTACATACAAGTACAGGGCATTGCACTGAGGGGACTTT
TCATCATCGACAAGGAAGGAGTCATTCAGCATTCCACCATCAACAACCTTGGTATTGGTCGAAGTGTTGATGAGACAATGAGAACCCTCCAGGTAAATATAAAGAACAAAAACAACATTG
AGATAGATAGAAAGAGATATGTTTTTTGCGGTTTAGGGTTTAGATGCGTTACGTGTTGCTCCTTGCGATGTTGTCTTGCAGGCATTACAGTATGTTCAAGAAAACCCGGATGAAGTTTGC
CCTGCGGGATGGAAGCCCGGGGAGAAATCAATGAAACCTGACCCCAAGCTCAGCAAAGAATACTTTTCAGCTATCTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ACACAGTCAC AGAGTTATGT CAATGGCGTC TATAGCTTCT TCTTCCACCA CCACCCTTAT CTCTTCCTCT AGGGTTCTTC TTCCCTCCAA GTCTTCTCTT TTATCTCCCG CCGTGTCTTT CCCCCGAACC TTCGCATCAT CCTCTTCCGG ATTCTCTCGT CTCGTTCCCC TAACCTCCAG ACTCTCCGCC TCACGCCGGA GCTTCGTCGT CAAGGCACAG GCTGATGATT TACCATTGGT CGGTAATAAG GCGCCTGATT TTGAGGCAGA GGCAGTTTTT GATCAAGAGT TTATAAAGGT GAAGCTCTCT GAGTACATTG GGAAAAAGTA CGTGATTCTA TTTTTCTACC CATTGGACTT CACTTTCGTT TGCCCCACAG AGATTACTGC CTTCAGTGAC CGTTATGAAG AATTTGAGAA GCTAAACACC GAAGTATTAG GGGTCTCAGT CGACAGTGTG TTCTCGCATC TCGCGTGGGT CCAAACAGAC AGAAAATCGG GTGGGCTCGG TGATCTGAAT TACCCGCTTG TTTCAGATAT CACTAAATCC ATTTCAAAAT CGTTTGGAGT GCTCATCCCT GACCAGGGCA TTGCACTGAG GGGACTTTTC ATCATCGACA AGGAAGGAGT CATTCAGCAT TCCACCATCA ACAACCTTGG TATTGGTCGA AGTGTTGATG AGACAATGAG AACCCTCCAG GCATTACAGT ATGTTCAAGA AAACCCGGAT GAAGTTTGCC CTGCGGGATG GAAGCCCGGG GAGAAATCAA TGAAACCTGA CCCCAAGCTC AGCAAAGAAT ACTTTTCAGC TATCTAGAAG CTAAAACTGA ACAATTGTTT

Retrieve as FASTA