Entry information : ZmPrx52 (peroxidase K)
Entry ID 748
Creation 2005-12-09 (Christophe Dunand)
Last sequence changes 2005-12-09 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-12-23 (Marie Brette (Scipio))
Peroxidase information: ZmPrx52 (peroxidase K)
Name (synonym) ZmPrx52 (peroxidase K)
Class Class III peroxidase    [Orthogroup: Prx214]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx52
start..stop
S start..stop
SbPrx13 555 0 1..318 1..320
OsPrx127 427 5e-152 16..317 19..317
BdiPrx107 380 2e-133 16..317 16..318
ZmPrx05 292 1e-98 30..313 24..316
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 125427491..125427715 225 N° 2 125427801..125427986 186 N° 3 125428074..125428239 166 N° 4 125428328..125428707 380
join(125427491..125427715,125427801..125427986,125428074..125428239,125428328..1 25428707)


exon

Literature and cross-references ZmPrx52 (peroxidase K)
Literature Bohnert,H. et al., NSF Grant DBI-0211842: Functional Genomics of Root Growth and Root Signaling Under Drought. unpublished
Protein ref. UniProtKB:   Q9ZTS6 [Fragment]
DNA ref. GenBank:   AC218903.2 (159343..160556)
Cluster/Prediction ref. UniGene:   Zm.41353
Protein sequence: ZmPrx52 (peroxidase K)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (291)
PWM (Da):   %s   34439.38 (31842.9)  
PI (pH):   %s   8.7 (8.54) Peptide Signal:   %s   cut: 28 range:28-318
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVGKGGGLLVLVVVGLLLHGTRVADAQSLRVGYYSQTCGSAESIVADEVQKASYRDRGVLASLIRLHFHDCFVNGCDGSVLLEASDRQAEKNAKPNLSLRGFDVIERIKQRLEAACALTVSCADIVAFAARDSVKLSGGLWYAVPGGRQDGTVSRASMTGDLPPPNQRNVDLLAQYFYRKGLTLDEMVLLSAAHTVGIAHCSSFDYRLTSDQDKGMDPAFRNSLRSQCQYNPSNYVPLDAGSQYAFDTGYFSNVLANRTVLDSDAALASPRTADKVKQWKNNPDWFKNSFAAAMVKMGSIRGSYPGKVRLNCTRVRM

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 9, 3 introns) and 6 ESTs (1 unigene and 1 TGI). Also found in AC205898.3.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTGGGGAAGGGAGGAGGGCTGCTGGTCCTCGTCGTTGTAGGTCTGCTCCTGCACGGCACCCGTGTCGCCGACGCGCAGTCTCTCCGGGTTGGGTACTACAGCCAGACGTGCGGC
AGCGCCGAGTCCATCGTCGCCGACGAGGTCCAGAAGGCGTCGTACAGGGATAGGGGCGTCCTGGCCAGCCTCATCCGGCTGCACTTCCACGACTGCTTCGTCAAT
GTACGTAAGAGACCG
AGCAAATAAATTCCCACGCCCGCCGATCGATTTGCTCATCACCGGAACGGCGGCATGCACTTCATTTCAGGGCTGCGACGGGTCGGTGCTGTTGGAGGCCAGTGACCGGCAGGCGGAGAA
GAACGCCAAGCCCAACCTGAGCCTGCGAGGGTTCGACGTCATCGAGAGGATCAAGCAGAGGCTGGAGGCCGCGTGCGCGCTGACGGTCTCGTGCGCGGACATTGTGGCCTTCGCCGCCAG
GGACAGCGTTAAGCTG
GTACGCACAAGCACAACGGATCGGACTTACCCTTATTAATTCATCAATCTTAATTCACCAATTAATAAAATTCACGTACGAGCACAGAGCGGTGGCCTTTGGTA
CGCCGTTCCCGGCGGGCGGCAGGACGGCACGGTGTCGCGGGCGAGCATGACCGGCGACCTCCCGCCTCCGAACCAGCGCAACGTGGACCTGCTCGCGCAGTACTTCTACCGCAAGGGCCT
GACGCTGGACGAAATGGTCCTCCTCTCAG
GTACGCTACTAGCTATATATACCTCACTTCTCCATTGCTCTCCAACACACATGCACGATCGAGGCGATTGACGCGTGCGTGCGTGCAGCCG
CGCACACGGTGGGCATCGCGCACTGCAGCTCGTTCGACTACCGGCTGACGAGCGACCAGGACAAGGGCATGGACCCGGCCTTCCGCAACAGCCTACGGAGCCAGTGCCAGTACAACCCCA
GCAACTACGTGCCCTTGGACGCCGGCAGCCAGTACGCGTTCGACACCGGCTACTTCTCCAACGTGCTGGCCAACCGCACCGTGCTCGACTCCGACGCCGCCCTCGCCTCGCCGCGCACAG
CAGACAAGGTCAAGCAGTGGAAGAACAACCCGGACTGGTTCAAGAACAGCTTCGCGGCCGCCATGGTCAAGATGGGCAGCATCCGCGGCAGCTACCCCGGCAAGGTCCGACTCAATTGCA
CCAGGGTCAGGATGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTGGGGAAGGGAGGAGGGCTGCTGGTCCTCGTCGTTGTAGGTCTGCTCCTGCACGGCACCCGTGTCGCCGACGCGCAGTCTCTCCGGGTTGGGTACTACAGCCAGACGTGCGGC
AGCGCCGAGTCCATCGTCGCCGACGAGGTCCAGAAGGCGTCGTACAGGGATAGGGGCGTCCTGGCCAGCCTCATCCGGCTGCACTTCCACGACTGCTTCGTCAAT
GGCTGCGACGGGTCG
GTGCTGTTGGAGGCCAGTGACCGGCAGGCGGAGAAGAACGCCAAGCCCAACCTGAGCCTGCGAGGGTTCGACGTCATCGAGAGGATCAAGCAGAGGCTGGAGGCCGCGTGCGCGCTGACG
GTCTCGTGCGCGGACATTGTGGCCTTCGCCGCCAGGGACAGCGTTAAGCTG
AGCGGTGGCCTTTGGTACGCCGTTCCCGGCGGGCGGCAGGACGGCACGGTGTCGCGGGCGAGCATGACC
GGCGACCTCCCGCCTCCGAACCAGCGCAACGTGGACCTGCTCGCGCAGTACTTCTACCGCAAGGGCCTGACGCTGGACGAAATGGTCCTCCTCTCAG
CCGCGCACACGGTGGGCATCGCG
CACTGCAGCTCGTTCGACTACCGGCTGACGAGCGACCAGGACAAGGGCATGGACCCGGCCTTCCGCAACAGCCTACGGAGCCAGTGCCAGTACAACCCCAGCAACTACGTGCCCTTGGAC
GCCGGCAGCCAGTACGCGTTCGACACCGGCTACTTCTCCAACGTGCTGGCCAACCGCACCGTGCTCGACTCCGACGCCGCCCTCGCCTCGCCGCGCACAGCAGACAAGGTCAAGCAGTGG
AAGAACAACCCGGACTGGTTCAAGAACAGCTTCGCGGCCGCCATGGTCAAGATGGGCAGCATCCGCGGCAGCTACCCCGGCAAGGTCCGACTCAATTGCACCAGGGTCAGGATGTGA

Retrieve as FASTA