View Redoxidase 7481

Entry information : AlyPrx63

Entry ID	7481
Creation	2010-08-10 (Christophe Dunand)
Last sequence changes	2010-08-10 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2010-12-24 (Marie Brette (Scipio))

Peroxidase information: AlyPrx63

Name

AlyPrx63

Class

Class III peroxidase [Orthogroup: Prx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis lyrata [TaxId: 59689 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AlyPrx63 start..stop	S start..stop
AtPrx63	624	0	1..328	1..328
BstrPrx39	615	0	1..328	1..327
CrubPrx80	613	0	1..328	1..328
CagraPrx18	612	0	1..328	1..328

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	22563751..22564737	985
join(22563751..22564737)

Literature and cross-references AlyPrx63

DNA ref.	Phytozome 12: scaffold_7 (22563751..22564737)

Protein sequence: AlyPrx63

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	328 (301)
PWM (Da):	36049.17 (33061.7)	Transmb domain:	i7-29o
PI (pH):	7.95 (8.21)	Peptide Signal:	cut: 28 range:28-328

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAEQSQFNNL TLTIIILCFS FQSLSSAAES HLTVDFYSKS CPNFLDIIRE TITNKQISTP TTAAAALRLF FHDCFPNGCD ASVLVSSTAF NTAERDSSIN LSLPGDGFDV VIRAKTALEL ACPNTVSCSD IIAAAVRDLL VTVGGPYYEI SLGRRDSRVS KSSLVSDLLP LPSMQISKLI DQFSSRGFSV QEMVALSGAH TIGFSHCKEF TNRVNPNNST GYNPRFAVAL KKACLNYRND
PTISVFNDVM TPNKFDNMYF QNIPKGLGLL ESDHGLFSDP RTRPFVELYA RDQARFFKDF AGAMQKLSLH GVLTGRRGEI RRRCDAIN

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 7, no intron).

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCGGAAC AATCTCAATT CAATAATCTC ACCCTCACCA TCATCATCCT CTGCTTCTCC TTCCAATCAC TATCCTCCGC CGCTGAATCT CACCTCACCG TCGATTTCTA CTCCAAATCT TGCCCTAATT TCCTCGACAT TATCCGCGAA ACCATCACCA ACAAACAGAT CTCAACTCCA ACAACCGCCG CCGCAGCTCT CCGCCTCTTC TTCCACGACT GCTTCCCTAA CGGCTGCGAC GCCTCCGTCC TCGTTTCCTC AACCGCTTTC AACACCGCAG AACGCGATTC ATCAATCAAT CTCTCTCTCC CCGGCGACGG ATTCGACGTC GTAATCCGAG CTAAAACAGC TCTAGAACTC GCTTGTCCCA ACACAGTCTC TTGCTCCGAT ATCATCGCCG CCGCGGTACG AGATCTCCTC GTAACCGTCG GTGGTCCTTA CTACGAAATC TCCCTCGGCC GTCGCGATTC TCGTGTCTCG AAATCGTCTC TCGTCTCCGA TCTCCTCCCA CTTCCATCGA TGCAGATCTC GAAGCTCATC GATCAATTCA GCTCCAGAGG CTTCTCCGTT CAAGAAATGG TTGCTTTGAG CGGTGCTCAC ACCATCGGAT TCTCACATTG CAAAGAGTTC ACTAACCGGG TCAACCCGAA TAATAGTACC GGGTATAACC CGAGATTCGC GGTAGCTTTA AAGAAAGCTT GTTTGAATTA CAGAAATGAC CCTACGATCT CTGTCTTCAA CGACGTGATG ACTCCAAACA AATTCGATAA TATGTATTTC CAGAATATTC CGAAAGGTCT CGGGTTACTT GAATCGGATC ACGGGTTATT CTCCGACCCG AGAACCCGTC CGTTTGTTGA GTTATACGCG AGAGACCAAG CTCGATTCTT TAAAGACTTC GCCGGAGCTA TGCAGAAGTT GAGTCTTCAC GGTGTTTTGA CCGGACGGCG AGGAGAGATC
CGACGAAGGT GTGATGCGAT CAACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA