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Entry information : AlyPrx16
Entry ID 7486
Creation 2010-08-10 (Christophe Dunand)
Last sequence changes 2010-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyPrx16
Name AlyPrx16
Class Class III peroxidase    [Orthogroup: Prx032]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyPrx16
start..stop		 S start..stop
AtPrx16 635 0 1..323 1..323
CagraPrx13 598 0 1..323 1..323
CrubPrx115 596 0 1..323 1..323
NoffPrx16-1A 585 0 1..323 1..323
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7486' 'join(23546745..23546954,23547529..23547717,23548323..23548488,23548573..23548979)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 23546745..23546954 208 N° 2 23547529..23547717 187 N° 3 23548323..23548488 164 N° 4 23548573..23548979 405
join(23546745..23546954,23547529..23547717,23548323..23548488,23548573..23548979 )


exon

Literature and cross-references AlyPrx16
DNA ref. Phytozome 12:   scaffold_3 (23546745..23548979)
Protein sequence: AlyPrx16
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (300)
PWM (Da):   %s   35776.31 (33240.0) Transmb domain:   %s   i5-27o
PI (pH):   %s   10.06 (10.01) Peptide Signal:   %s   cut: 24 range:24-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKYQGSFSIVALFLILFSSSVFAQLQTNFYRKSCPNVETIVRNPV
RQKFQQTFVTAPAILRLFFHDCFVRGCDASILLASPSEKDHPDDKSLAGDGFDTVAKAKQAVDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTIASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGA
HTIGFAHCGRFSKRIYNFSPKRPIDPTLNTQYALQLRQMCPIRVDPRIAINMDPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDQRSRSTVNSFASNEATFRQAFILAITKLGRVGVKTG
NAGEIRRDCSRVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, 3 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGTACCAAGGCAGCTTCTCCATTGTTGCTCTTTTTCTCATTCTCTTTTCTTCATCTGTCTTTGCTCAGCTACAGACAAATTTTTACCGGAAGTCATGTCCTAACGTCGAAACTATT
GTCCGCAACCCCGTCCGCCAAAAGTTCCAACAGACTTTTGTTACGGCTCCAGCCATCCTCCGCCTTTTCTTCCATGATTGCTTCGTCCGTGTGTAAGATTTTTATCTAATCGATATATTG
AATTTTTTCCCCATAAAATTTGTGTTTAAGTTTACATTTTGTAAACGATATTGGATAGAAAAAGCAGACTATGTGTTTTTTCATGAAATACAATTATTAAACAAGTAAATGAAAAATATA
AATATGAATGTTTGTTTAAAACAATGAAAAAGTGTTATTGGTACTTTCATTTGCAAAAAAGTTTTTTAGATAGATTTTTATTATTTTGGTTTATTGATTCTTCTTATTCTACATAATTTC
AATGGTTTGATGATTTTTAAATTCCACTCAAAATCTCTTTGTTTTTCAAAACGTTTAGTTATATTGATTTTGTAATTCTACGAATTTTGAATGTTGTTGAAACAAAGATATTCAATTTAT
AAAAACTAAACGTTCAAAATACTATGAAGTTGTCATCATGTTTTAAAAATTTATAAAACATAATGAAATCTCTCAACTAAACAAAAAGGATCTCTGCCAAAATGCAAATTAAAGTACCAA
TAATTAATTCTTAGGAAGACCCATTCTCTTGTATATATTGTTTTGACTATTTAACGTTATATACAGGGTTGTGATGCTTCGATATTGCTGGCGTCTCCATCGGAGAAAGATCACCCTGAT
GACAAGTCACTAGCCGGAGACGGGTTTGACACGGTGGCAAAGGCAAAGCAGGCCGTTGATAGGGATCCCAATTGCCGTAACAAAGTCTCATGCGCTGACATTTTGGCTCTAGCCACTCGT
GACGTCGTCGTTTTGTGGTACATTTCAACTCTTATATTGATCGTCTTTTTCTAGTTTCCTCGACAACTTTTATCCATCTATTCAGAATTCTATTACTCATCTAGGCTAAAGGGAAATGTC
AAAAACACAACAAAAAAAAACCTAGGCTAAAAGGAAAAACAATTCTTGTATTCCTTCTTTTGTGACACTAAGTAACATTAATACATTACTGTTTCGTTTATATGTAAAAAAAAACAAAAT
CATGATTATAAAAAAATCACTAACGATTTGGTTATTATTAATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTGGTTATTATTCTTTTTGTGTGATCATCCATAA
AGTTCGGATTCCAATAACGAGAAGGCAACTTATGTGCAGATTTCCTAGCTAAGAGAGTGCTCTCATGTAATGAGTTATGGTCTTTGTATAATGCTTATCCATCTTTTCTAAACATTCTTG
TAAACCATGACATTGACTATGAAAGCTAATAAAGTTTTTAGAAGGAAAAATAAAAAAAATCTTTTTGTGTGATTATTATTTTTTTTTTTGTGTGTTATTGTTACTAAAAGACAGTGAAAC
TAAAGATAATAATATATTGTAGACTGGCGGACCGAACTATCCGGTAGAGCTAGGGAGGAGAGACGGCAGACTATCGACGATAGCTAGCGTTCAACACAGTCTACCCCAGCCTAGTTTCAA
ATTGGACCAACTTAACACTATGTTCGCTCGTCACGGTCTATCCCAAACCGATATGATCGCACTCTCAGAGGTATTTAAACCGATGCAAACTGGATTAGACCGATTTTCATATATCTTAGA
ACCAAGTCTAACAGTTGATTTTTATGATATATAGGAGCACATACTATCGGATTCGCACATTGTGGAAGGTTTTCAAAGAGAATTTACAATTTTAGTCCTAAACGCCCGATTGATCCGACT
TTAAATACTCAATACGCGTTACAGTTGAGACAAATGTGTCCCATTCGGGTTGACCCGAGGATCGCGATTAATATGGATCCAACTTCTCCAAATACCTTTGACAATGCTTATTTCAAAAAC
CTCCAAAAAGGGATGGGTTTGTTCACGTCAGATCAAGTTTTGTTCTCTGATCAACGGTCTAGATCAACTGTCAATTCATTTGCTTCTAATGAAGCAACTTTTAGACAAGCTTTTATTTTG
GCTATAACGAAGTTGGGTCGGGTTGGAGTTAAAACCGGTAACGCCGGTGAGATAAGACGGGATTGTTCACGTGTTAATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGTACCAAGGCAGCTTCTCCATTGTTGCTCTTTTTCTCATTCTCTTTTCTTCATCTGTCTTTGCTCAGCTACAGACAAATTTTTACCGGAAGTCATGTCCTAACGTCGAAACTATT
GTCCGCAACCCCGTCCGCCAAAAGTTCCAACAGACTTTTGTTACGGCTCCAGCCATCCTCCGCCTTTTCTTCCATGATTGCTTCGTCCGTGGTTGTGATGCTTCGATATTGCTGGCGTCT
CCATCGGAGAAAGATCACCCTGATGACAAGTCACTAGCCGGAGACGGGTTTGACACGGTGGCAAAGGCAAAGCAGGCCGTTGATAGGGATCCCAATTGCCGTAACAAAGTCTCATGCGCT
GACATTTTGGCTCTAGCCACTCGTGACGTCGTCGTTTTGACTGGCGGACCGAACTATCCGGTAGAGCTAGGGAGGAGAGACGGCAGACTATCGACGATAGCTAGCGTTCAACACAGTCTA
CCCCAGCCTAGTTTCAAATTGGACCAACTTAACACTATGTTCGCTCGTCACGGTCTATCCCAAACCGATATGATCGCACTCTCAGGAGCACATACTATCGGATTCGCACATTGTGGAAGG
TTTTCAAAGAGAATTTACAATTTTAGTCCTAAACGCCCGATTGATCCGACTTTAAATACTCAATACGCGTTACAGTTGAGACAAATGTGTCCCATTCGGGTTGACCCGAGGATCGCGATT
AATATGGATCCAACTTCTCCAAATACCTTTGACAATGCTTATTTCAAAAACCTCCAAAAAGGGATGGGTTTGTTCACGTCAGATCAAGTTTTGTTCTCTGATCAACGGTCTAGATCAACT
GTCAATTCATTTGCTTCTAATGAAGCAACTTTTAGACAAGCTTTTATTTTGGCTATAACGAAGTTGGGTCGGGTTGGAGTTAAAACCGGTAACGCCGGTGAGATAAGACGGGATTGTTCA
CGTGTTAATTAG

Retrieve as FASTA