Entry information : AlyPrx48
Entry ID 7492
Creation 2010-08-10 (Christophe Dunand)
Last sequence changes 2010-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyPrx48
Name AlyPrx48
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyPrx48
start..stop
S start..stop
AhalPrx36 800 0 1..405 1..405
AtPrx48 760 0 1..405 1..404
NoffPrx48-1A 664 0 1..405 1..416
CrubPrx86 652 0 1..405 1..414
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7492' 'join(3080857..3081198,3081610..3081798,3081878..3082043,3082178..3082698)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3080857..3081198 340 N° 2 3081610..3081798 187 N° 3 3081878..3082043 164 N° 4 3082178..3082698 519
join(3080857..3081198,3081610..3081798,3081878..3082043,3082178..3082698)


exon

Literature and cross-references AlyPrx48
DNA ref. Phytozome 12:   scaffold_7 (3080857..3082698)
Protein sequence: AlyPrx48
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   405
PWM (Da):   %s   44490.09 Transmb domain:   %s   i7-25o
PI (pH):   %s   4.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRFLGDYKIALLTCSVIALSIYFAIKGVEFRFANDSPGNRNGGKVSEKSLFEDEFMYMSIAEDIDRSHLHYDYYRESCPTAEKIIAKASRDIYNVTPSVAPSLIRLLFHDCFIEGCDASV
LLDADEAHTSEKDASPNLSLKGFDVIDAIKSELENVCPGVVSCADLLVLAAREAVLV
AGGPFYPLETGRKDSAAAFREIAEQQLPAPDATLSEILERFSVRGFNERETVSLFGAHSIGIT
HCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSASSPSASPGTGLLPSLPASDSENSYGMSSGKRNDEVIDLSYNNEGGDENFGTRYFRRLMQKKGLLFSDQQLMGSEVTEMWV
RAYASDPLLFRREFAMSMMKLSSNHVLTGPLGQVRTSCSKALPRN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, 3 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGTTTCTCGGAGACTACAAGATCGCTTTACTTACTTGCTCCGTTATCGCTCTCAGCATCTACTTTGCGATTAAAGGCGTCGAATTTCGTTTCGCGAACGATTCACCGGGAAATCGT
AACGGAGGTAAGGTTTCCGAGAAATCTCTCTTCGAAGATGAATTCATGTACATGTCAATCGCTGAAGATATCGATCGATCTCACCTCCACTACGATTACTACCGTGAATCTTGCCCTACC
GCCGAGAAAATCATCGCGAAAGCTAGCAGAGATATCTACAATGTCACACCCAGCGTGGCTCCGTCTCTTATCCGTCTCCTCTTTCACGATTGCTTCATCGAG
AGGTCAGATTTTCTGATA
TCTGGCTTTCCCTTTCTTGTAATTTTGATTTCGCTAAGCTCGATCTGTGGAAGATTGTTTGGGATCTTGTTTCGGGAATGTTCGATTGTGATATCTCTATCTCAGATTTGAGTTCATATC
TGTCAGTGGAATTATGCTTTCTCAGTAGATTTTAGGTGTTTATCTCTCAATCTTGGCTACGGATATGCAGAAGTTATGTGTTTGATACTCAAGTTTTGATGTTATTAGCATGCTTTGTGA
ATCAAATACGGATATGCAGAAGTTATGTGTTTGATCCTCAGATTTGCTCATGTTACAGTTTGGATTTGCTCAGTTTTTATCAAATTCTGTGTTTTCTTTAGCACTTGTTGTAGTTTGCTC
ATGCTACAATTTGGTGAATTGTGTTTTTGCTGCAGGGATGTGATGCATCAGTCCTTCTAGACGCAGATGAAGCACATACTTCTGAGAAAGATGCATCTCCAAACCTATCCTTGAAAGGCT
TTGATGTGATTGACGCCATTAAGTCTGAGCTAGAGAATGTCTGTCCCGGAGTTGTGTCCTGCGCCGACCTTCTTGTATTGGCAGCTAGAGAAGCAGTCCTAGTG
TGGTAAATTGCCTCAC
TCTCTCTTCTGGTTTGTGCATGTTAATACTTCTGCAACGCTTAATAATGTCTTTGAAACTCTCAGGCTGGTGGTCCATTTTATCCTCTAGAAACTGGAAGGAAGGATAGTGCAGCAGCCT
TCAGGGAGATTGCAGAACAACAGCTTCCTGCACCAGACGCTACTCTCTCGGAGATTCTTGAAAGGTTTTCTGTCAGAGGATTCAACGAGAGAGAAACCGTCAGCTTATTTG
TGGTAATTT
CTCACTTTTAGATATCAACATCTCTCTTTGCTTAGCTAAATAGTGTCGTATTGGGGCATTCCTCACTTCTTGGAAATGGTTGACTCTTTGTGACATGATTCTTTTCTTCTGAATGATCTT
AATGCAGGAGCACACAGCATAGGCATCACGCATTGCACATTTTTTAAGAATCGCCTCTACAACTTCTCAGCAACCGGGAAGCCTGACCCTGAACTCAATCCAGGGTTCCTCCAAGAACTG
AAAACCAAATGCCCCTTCTCTGTCTCGGCTTCATCTCCATCTGCTTCCCCTGGCACTGGTTTACTACCGTCCTTACCTGCATCAGATTCCGAAAACAGCTACGGTATGAGCTCAGGAAAA
AGGAACGATGAAGTGATTGACTTGAGCTACAACAATGAAGGTGGTGATGAAAATTTTGGAACACGCTACTTCAGAAGACTGATGCAGAAGAAAGGGTTGCTGTTTTCTGACCAGCAACTA
ATGGGTAGTGAGGTGACTGAGATGTGGGTGAGGGCATATGCTTCTGATCCTCTGTTGTTCCGCAGAGAATTTGCTATGTCTATGATGAAACTGTCAAGCAATCATGTTTTGACTGGTCCA
CTAGGACAAGTGAGAACAAGCTGCTCAAAGGCCCTCCCGAGGAACTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGTTTCTCGGAGACTACAAGATCGCTTTACTTACTTGCTCCGTTATCGCTCTCAGCATCTACTTTGCGATTAAAGGCGTCGAATTTCGTTTCGCGAACGATTCACCGGGAAATCGT
AACGGAGGTAAGGTTTCCGAGAAATCTCTCTTCGAAGATGAATTCATGTACATGTCAATCGCTGAAGATATCGATCGATCTCACCTCCACTACGATTACTACCGTGAATCTTGCCCTACC
GCCGAGAAAATCATCGCGAAAGCTAGCAGAGATATCTACAATGTCACACCCAGCGTGGCTCCGTCTCTTATCCGTCTCCTCTTTCACGATTGCTTCATCGAG
GGATGTGATGCATCAGTC
CTTCTAGACGCAGATGAAGCACATACTTCTGAGAAAGATGCATCTCCAAACCTATCCTTGAAAGGCTTTGATGTGATTGACGCCATTAAGTCTGAGCTAGAGAATGTCTGTCCCGGAGTT
GTGTCCTGCGCCGACCTTCTTGTATTGGCAGCTAGAGAAGCAGTCCTAGTG
GCTGGTGGTCCATTTTATCCTCTAGAAACTGGAAGGAAGGATAGTGCAGCAGCCTTCAGGGAGATTGCA
GAACAACAGCTTCCTGCACCAGACGCTACTCTCTCGGAGATTCTTGAAAGGTTTTCTGTCAGAGGATTCAACGAGAGAGAAACCGTCAGCTTATTTG
GAGCACACAGCATAGGCATCACG
CATTGCACATTTTTTAAGAATCGCCTCTACAACTTCTCAGCAACCGGGAAGCCTGACCCTGAACTCAATCCAGGGTTCCTCCAAGAACTGAAAACCAAATGCCCCTTCTCTGTCTCGGCT
TCATCTCCATCTGCTTCCCCTGGCACTGGTTTACTACCGTCCTTACCTGCATCAGATTCCGAAAACAGCTACGGTATGAGCTCAGGAAAAAGGAACGATGAAGTGATTGACTTGAGCTAC
AACAATGAAGGTGGTGATGAAAATTTTGGAACACGCTACTTCAGAAGACTGATGCAGAAGAAAGGGTTGCTGTTTTCTGACCAGCAACTAATGGGTAGTGAGGTGACTGAGATGTGGGTG
AGGGCATATGCTTCTGATCCTCTGTTGTTCCGCAGAGAATTTGCTATGTCTATGATGAAACTGTCAAGCAATCATGTTTTGACTGGTCCACTAGGACAAGTGAGAACAAGCTGCTCAAAG
GCCCTCCCGAGGAACTGA

Retrieve as FASTA