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Entry information : AlyRboh10 (AlyRbohJ)
Entry ID 7576
Creation 2010-08-11 (Christophe Dunand)
Last sequence changes 2010-08-11 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2015-12-10 (Catherine Mathe)
Peroxidase information: AlyRboh10 (AlyRbohJ)
Name (synonym) AlyRboh10 (AlyRbohJ)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh003]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyRboh10
start..stop		 S start..stop
AtRboh10 1743 0 1..912 1..912
TsRboh10 1682 0 1..912 1..892
NoffRboh10-1A 1603 0 1..912 1..911
AtRboh08 1523 0 9..912 7..886
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 12257568..12258051 482 N° 2 12257254..12257416 161 N° 3 12257020..12257182 161 N° 4 12255585..12256391 805
N° 5 12255388..12255483 94 N° 6 12255154..12255269 114 N° 7 12254947..12255049 101 N° 8 12254723..12254826 102
N° 9 12254468..12254627 158 N° 10 12254157..12254381 223 N° 11 12253741..12253869 127 N° 12 12253545..12253623 77
N° 13 12252885..12252994 108  
complement(join(12252885..12252994,12253545..12253623,12253741..12253869,1225415 7..12254381,12254468..12254627,12254723..12254826,12254947..12255049,12255154..1 2255269,12255388..12255483,12255585..12256391,12257020..12257182,12257254..12257 416,12257568..12258051))


exon

Literature and cross-references AlyRboh10 (AlyRbohJ)
DNA ref. Phytozome 12:   scaffold_5 (12258051..12252885)
Protein sequence: AlyRboh10 (AlyRbohJ)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   912
PWM (Da):   %s   102675.81 Transmb domain:   %s   o466-488i509-531o541-558i701-718o
PI (pH):   %s   9.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNNNRKVGTEDSTKWMLESVEIDPKGESSVKQSENTINSNNPESSGSGGGILKNVSKNLGVGSIIRSMSVNKWRKSGNLGPPSTRKSGNLGPPLPIAQEKRPGPQRVERTTSSAARGLQS
LRFLDRTVTGRERDSWRSIENRFNQFAVDGRLPKDKFGVCIGMGDTLEFAAEVYEALGRRRQINTENGIDKEQLKLFWEDMIKKDLDCRLQIFFDMCDKDGDGKLTEEEVKEVIVLSASA
NRLANLKKNAASYASLIMEELDPDQHGYIMWQLEVLLTGIVSNAESHKVVRKSQQLTRAMIPKRYRTPTSKYVSVTAELMYEHWKKIWVVTLWLAVNAALFIWKYEEFTTSPLYNITGRC
LCAAKGTAEILKLNMALILVPVLRRTLTFLRSTFLSHLIPFDDNINFHKLIAVAIAVISLLHTALHMLCNYPRLSACPNDLYYDYAGNLLGFMQPTYLGLMLTPVSVTGVLMIIFMGISF
TLAMHYFRRNIVKLPKPFNRLAGFNSFWYAHHLLVIAYALLIIHGYILIIEKPWYQKTTWMYVAIPMVLYASERLFSRVQEHNHRVHIIKAIVYSGNVLALYMTKPQGFKYKSGMYMFVK
CPDISKFEWHPFSVTSAPGDEYLSVHIRALGDWTSELRNRFATCEPHQTSKPSPNSLIRMETRARGANPHVEESQALFPRIFIKGPYGAPAQNYQKYDILLLIGLGIGATPFISILKDML
NNLKPGIPRGQKYEGSVGGESLGGSSVNGGSSVNGGSSVNGGGSVSGGGRKFPQRAYFYWVTREQASFEWFKGVMDDIAVYDKTNVIEMHNYLTSMYEAGDARSALIAMVQKLQHAKNGV
DIVSESRIRTHFARPNWRKVFSELSSKHETSRIGVFYCGSPTLVRPLKSLCQEFSLESSTRFTFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 12 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACAACAATAGAAAGGTTGGGACCGAAGATTCAACGAAATGGATGTTAGAGAGCGTCGAGATAGATCCAAAAGGCGAGAGTTCCGTGAAACAATCCGAAAACACAATCAATAGCAAT
AATCCCGAGAGTAGTGGTAGTGGTGGTGGGATCTTGAAGAATGTGTCTAAGAATCTTGGCGTGGGATCGATAATCAGGTCCATGAGTGTAAACAAATGGAGAAAGAGCGGTAATCTCGGG
CCCCCGAGCACGAGGAAGAGTGGAAACTTGGGGCCTCCGCTCCCTATTGCCCAAGAAAAAAGACCGGGGCCACAAAGAGTCGAGAGGACTACATCTAGTGCGGCTAGAGGACTACAAAGC
CTACGGTTCCTTGATCGGACTGTCACAGGACGGGAACGGGATTCGTGGAGATCAATCGAGAACCGGTTCAATCAATTTGCCGTTGACGGGAGGCTTCCCAAGGATAAATTCGGTGTTTGC
ATTGGTAAAACTAAAATTCATCCTTTTTTTTTACGTAAATGTAATTTAAAAAAATAAGGTCACACTTTATGTTTTTTGTCAACTTTAAAAGGTTGTTATTCAAAATGAAATATATAAAAT
GTTGTTTTCATGTTATAATTATGTTTGTGTAATAGGAGAATGGGAGATACATTGGAGTTTGCGGCAGAAGTATATGAAGCATTGGGTAGGAGAAGACAAATAAACACAGAAAATGGGATT
GATAAGGAACAACTCAAGCTTTTTTGGGAAGACATGATCAAGAAAGATCTCGACTGTCGCCTCCAGATCTTCTTCGACATGTAACTACTTTTTATTATGTTGGTTTTAATTTGAAAATAT
ATAGCAACAAAGGTTAACAATTGCGGTTTAGGTGTGTGACAAGGATGGAGACGGGAAGTTAACAGAAGAGGAAGTTAAAGAGGTCATAGTCTTGAGTGCATCAGCGAACAGGCTCGCTAA
TCTAAAGAAGAATGCTGCATCTTATGCTTCTTTGATCATGGAAGAACTCGACCCCGACCAACACGGTTACATTGAGGTATCATTTTGATTCCATTTCCATAATCTACGATATATTAGAGT
GACCATGTGAAATTTTCAGACTTGTAGGTCTAAAAATGTAGATCAACTAGTTATTGGTTAATGTAATTATTGGTTCATCGTTTTGAAGCTAGGGTATAATCAAACAATTCGAAGTTATTT
GTCATATATATGAAAATAGTAACGTTAAAAAAAAACTATGATATAGCTTGCAAAAGCTAAATAGTTTTGGACACGGAGATTAGCCTTTCTAAAAAAGAAAATTCCCCGGCTATAGACAAA
AAAAAACAGGAACTTTGGTGAATTCAGTTTTTGGTTTTTGGTTTCAGTTTAAAAAAAAAAAATCATATAGCTTTAGGTTTTATATATAAAAGTACTAAATACGAAAAAAAAAATATAAGT
ATACATTGCATGCGTTGTCCACGCTGCAATATCTTTTAGTTATTATATGAAAATGATAAATATAGTAGAAAATGGTAATTTTAGGTTTTACGAAATCGAAACCTAATTAATATTGATGTT
AAATCCAAAACTATATCTTCATGTTGCATATTTTTTGTTAAAACATATATCTTTGTGTTACATGCCTCGTCCACTCTGACATTTCTTTAGTTTACATCAACCAGATATGTGGCAACTCGA
GGTGTTATTAACAGGAATTGTATCAAACGCTGAGTCACATAAGGTGGTGAGGAAATCGCAACAGCTAACGCGAGCCATGATCCCAAAACGTTACAGAACACCGACTAGTAAATACGTTTC
AGTAACCGCCGAGCTAATGTACGAGCACTGGAAAAAGATTTGGGTCGTTACATTGTGGCTCGCAGTAAACGCCGCCCTCTTCATATGGAAATACGAAGAGTTCACCACAAGCCCTCTTTA
CAACATCACCGGACGCTGCCTTTGCGCCGCGAAAGGAACTGCGGAAATACTTAAACTCAACATGGCTTTGATCTTGGTCCCTGTTTTAAGAAGAACCCTTACGTTCCTCAGATCGACTTT
CTTGAGCCACCTGATCCCGTTCGATGATAACATCAACTTCCATAAGTTGATAGCGGTGGCGATAGCGGTTATTTCCTTGCTCCACACGGCACTACACATGCTATGCAACTATCCTAGGCT
AAGTGCTTGCCCTAACGATTTGTACTATGATTACGCGGGAAATCTCTTGGGGTTCATGCAACCGACCTATTTAGGTCTAATGCTGACCCCGGTTTCGGTCACAGGAGTTCTAATGATCAT
CTTCATGGGTATCTCATTCACGCTTGCTATGCATTACTTCAGAAGAAACATAGTGAAATTGCCTAAACCGTTTAACCGTCTTGCTGGATTTAATTCGTTTTGGTATGCTCATCATTTGCT
GGTTATTGCCTATGCTCTTCTTATCATTCATGGTTACATTCTTATCATCGAGAAGCCTTGGTACCAAAAAACGGTAAGTTTATACATATAAATACTAAAATGAATATATGTTAGGAGATA
TACAATCAAACTTTAGTATTTCTTAAAAATATTTGTTTGTATGGGAAAATGTAGACACATGGATGTACGTGGCCATACCAATGGTGTTGTACGCGAGCGAGAGGCTTTTCTCAAGAGTTC
AAGAACACAACCATCGTGTCCATATTATAAAGGTATAATTAAGATTCTTGTATTGTCCTGCTTACAACATTATTAAATTATGAAGATTGTCAAATGTAATAATAACAATTTAATTGTGTT
TTCTTTCCTCGTAAATTTTTGCATGCCTAGGCGCTATTGTATATTCAGGCAATGTTCTTGCACTCTATATGACAAAACCTCAAGGGTTCAAGTACAAAAGTGGCATGTACATGTTTGTCA
AGTGTCCTGATATCTCCAAATTCGAATGGTAATAACATCTTTTTCAAAAAAGGATCTAACCAATTCATATAACCTATATATTTATTTATTTATTTCTATCATTGTACTTATCATTTTGTC
TTTGTGGTTTAGGCGCATCCATTCTCCGTCACTTCTGCACCCGGAGATGAATATTTGAGCGTTCACATAAGAGCATTAGGAGATTGGACCTCTGAACTTAGGAACAGATTTGCAGAGGTA
ATTTTCTTAATTTGTCTTTTCAAATTTTTTAACATTTATCATTTTCAATAAACACTCATCTTAACCAAAATTAAACTCCAAATTTGATTTTATATAGTAAATTCTTGTTTCTTGTAGACA
CATGTGAGCCTCATCAAACATCGAAACCTAGTCCAAATAGTCTTATTAGGATGGAAACAAGAGCGAGAGGTGCAAATCCTCACGTTGAAGAATCACAAGCCTTGTAAGTGAATATATTTA
CTACCAAATCCATGCACGGATATTTCAACATAAGCTGATCGAAATATGATCTCATCCTATCCATATCTTCACAACCAGATATTTCCAAGAATTTTTATCAAAGGACCATACGGAGCTCCG
GCACAAAACTATCAGAAGTATGATATCCTTTTGTTGATTGGGCTAGGGATAGGGGCAACCCCATTTATAAGTATCCTAAAAGACATGTTGAACAATCTCAAACCTGGTATTCCAAGAGCC
GTAAGTAATCTACAACCATAGTGAGTCTTGGAGAAACAAAGTCTATCTATGAAAAAGTGATGGGGTGTGAAATTTGGAAAATGTAGGGGGGCAAAAGTATGAAGGAAGTGTAGGAGGTGA
GAGCTTAGGAGGATCAAGTGTAAATGGAGGATCGAGTGTAAATGGAGGATCTAGTGTAAATGGAGGAGGTAGTGTAAGTGGAGGAGGTAGGAAGTTTCCACAAAGAGCATATTTTTACTG
GGTGACAAGAGAACAAGCTTCTTTCGAATGGTTCAAAGGAGTTATGGATGATATTGCAGTGTATGACAAAACCGTAAGTTCTTATATCCAGTTTTATCATATATTAATAGATTTTAAATG
ATGTTAAATAAGATTTTCATATCAGAATTTCTGATAGTCTAATAAAGTACAAAATTATTTTTATAATGTTGAAAGAAAAAACTTAAATTGTTTTTTTTTTCCATAGAAATTCTAAGTAAT
TAAAACTGAAACATCATGAAAAGAAAAATAATTTGATGAGAAATTTTAATGATGAAATGCAAATTTAAAATAGATATCTTTATCTATATATTATTTTTCATTCGTTTTTTGTATTGACAG
AAAATGTGATAGAGATGCATAACTACTTAACAAGTATGTACGAAGCAGGAGATGCAAGATCTGCTCTAATTGCTATGGTCCAGAAACTTCAACATGCCAAAAATGGTGTTGACATTGTGT
CCGAGAGCCGAGTATGTTCATTTTTTTGTACATTATATTATCCATTTAATATTTTATTTACAAATAGTTATACTTTTCATCGTGTTATATACAAATACAATATATTTCTAATATTCCACC
TGATTCAGATATACGAACCCATTTCGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAATTGTCAAGCAAGCACGAAACTTCTCGCATAGGTACGTAAATATTGTTTCTCCTAATTTACTT
AAAACATTCTTTAGTACTGTTGCTAGCAAAATGTTTTAGTGTATTTTTACTAATTAAATATTTAAAGTGTAGTTCTCACACCATCTAAGAAACTTAGGGAATTTTCATGTATTTACCTTG
AACCTTTTTTTTTTATATATTCAACTAGTTGCATATAAAGCACTTTAATGAATATTTACAATCTTAGCAAAAAAAAAAAAAAAAAAATTAAGCACTTATTTTTCTTGCATATTTATTAAG
AAAATTTTGAAACTAGCTAAGTAATAAACAAGGTAAACAATATTTGATTTAGTATATTCTGGTCTGACTTTTTTGGAATTTTTGTACTTTTTTTTTTTTGTCATCGAATTTTTGTACTTT
GAATGATAAAGATATCTTAAATTTTAGTAGTTCATTTGGTAAAGAAAAATTTCAAAGATTTAGTTAATATTTATTTGGGATGAAAAATCTAATACATTTAATTTGAAATTTAATGTACAT
GATTTTTTTTTAGATTAATTTTAATTTGTATTGTTTCAGGTGTGTGTTCTACTGTGGAAGTCCAACGCTTGTTCGACCACTAAAATCCCTTTGTCAGGAGTTCAGTCTCGAGTCGTCCAC
CCGCTTTACTTTCCACAAAGAGAATTTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACAACAATAGAAAGGTTGGGACCGAAGATTCAACGAAATGGATGTTAGAGAGCGTCGAGATAGATCCAAAAGGCGAGAGTTCCGTGAAACAATCCGAAAACACAATCAATAGCAAT
AATCCCGAGAGTAGTGGTAGTGGTGGTGGGATCTTGAAGAATGTGTCTAAGAATCTTGGCGTGGGATCGATAATCAGGTCCATGAGTGTAAACAAATGGAGAAAGAGCGGTAATCTCGGG
CCCCCGAGCACGAGGAAGAGTGGAAACTTGGGGCCTCCGCTCCCTATTGCCCAAGAAAAAAGACCGGGGCCACAAAGAGTCGAGAGGACTACATCTAGTGCGGCTAGAGGACTACAAAGC
CTACGGTTCCTTGATCGGACTGTCACAGGACGGGAACGGGATTCGTGGAGATCAATCGAGAACCGGTTCAATCAATTTGCCGTTGACGGGAGGCTTCCCAAGGATAAATTCGGTGTTTGC
ATTGGAATGGGAGATACATTGGAGTTTGCGGCAGAAGTATATGAAGCATTGGGTAGGAGAAGACAAATAAACACAGAAAATGGGATTGATAAGGAACAACTCAAGCTTTTTTGGGAAGAC
ATGATCAAGAAAGATCTCGACTGTCGCCTCCAGATCTTCTTCGACATGTGTGACAAGGATGGAGACGGGAAGTTAACAGAAGAGGAAGTTAAAGAGGTCATAGTCTTGAGTGCATCAGCG
AACAGGCTCGCTAATCTAAAGAAGAATGCTGCATCTTATGCTTCTTTGATCATGGAAGAACTCGACCCCGACCAACACGGTTACATTGAGATGTGGCAACTCGAGGTGTTATTAACAGGA
ATTGTATCAAACGCTGAGTCACATAAGGTGGTGAGGAAATCGCAACAGCTAACGCGAGCCATGATCCCAAAACGTTACAGAACACCGACTAGTAAATACGTTTCAGTAACCGCCGAGCTA
ATGTACGAGCACTGGAAAAAGATTTGGGTCGTTACATTGTGGCTCGCAGTAAACGCCGCCCTCTTCATATGGAAATACGAAGAGTTCACCACAAGCCCTCTTTACAACATCACCGGACGC
TGCCTTTGCGCCGCGAAAGGAACTGCGGAAATACTTAAACTCAACATGGCTTTGATCTTGGTCCCTGTTTTAAGAAGAACCCTTACGTTCCTCAGATCGACTTTCTTGAGCCACCTGATC
CCGTTCGATGATAACATCAACTTCCATAAGTTGATAGCGGTGGCGATAGCGGTTATTTCCTTGCTCCACACGGCACTACACATGCTATGCAACTATCCTAGGCTAAGTGCTTGCCCTAAC
GATTTGTACTATGATTACGCGGGAAATCTCTTGGGGTTCATGCAACCGACCTATTTAGGTCTAATGCTGACCCCGGTTTCGGTCACAGGAGTTCTAATGATCATCTTCATGGGTATCTCA
TTCACGCTTGCTATGCATTACTTCAGAAGAAACATAGTGAAATTGCCTAAACCGTTTAACCGTCTTGCTGGATTTAATTCGTTTTGGTATGCTCATCATTTGCTGGTTATTGCCTATGCT
CTTCTTATCATTCATGGTTACATTCTTATCATCGAGAAGCCTTGGTACCAAAAAACGACATGGATGTACGTGGCCATACCAATGGTGTTGTACGCGAGCGAGAGGCTTTTCTCAAGAGTT
CAAGAACACAACCATCGTGTCCATATTATAAAGGCTATTGTATATTCAGGCAATGTTCTTGCACTCTATATGACAAAACCTCAAGGGTTCAAGTACAAAAGTGGCATGTACATGTTTGTC
AAGTGTCCTGATATCTCCAAATTCGAATGGCATCCATTCTCCGTCACTTCTGCACCCGGAGATGAATATTTGAGCGTTCACATAAGAGCATTAGGAGATTGGACCTCTGAACTTAGGAAC
AGATTTGCAGAGACATGTGAGCCTCATCAAACATCGAAACCTAGTCCAAATAGTCTTATTAGGATGGAAACAAGAGCGAGAGGTGCAAATCCTCACGTTGAAGAATCACAAGCCTTATTT
CCAAGAATTTTTATCAAAGGACCATACGGAGCTCCGGCACAAAACTATCAGAAGTATGATATCCTTTTGTTGATTGGGCTAGGGATAGGGGCAACCCCATTTATAAGTATCCTAAAAGAC
ATGTTGAACAATCTCAAACCTGGTATTCCAAGAGCCGGGCAAAAGTATGAAGGAAGTGTAGGAGGTGAGAGCTTAGGAGGATCAAGTGTAAATGGAGGATCGAGTGTAAATGGAGGATCT
AGTGTAAATGGAGGAGGTAGTGTAAGTGGAGGAGGTAGGAAGTTTCCACAAAGAGCATATTTTTACTGGGTGACAAGAGAACAAGCTTCTTTCGAATGGTTCAAAGGAGTTATGGATGAT
ATTGCAGTGTATGACAAAACCAATGTGATAGAGATGCATAACTACTTAACAAGTATGTACGAAGCAGGAGATGCAAGATCTGCTCTAATTGCTATGGTCCAGAAACTTCAACATGCCAAA
AATGGTGTTGACATTGTGTCCGAGAGCCGAATACGAACCCATTTCGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAATTGTCAAGCAAGCACGAAACTTCTCGCATAGGTGTGTTCTAC
TGTGGAAGTCCAACGCTTGTTCGACCACTAAAATCCCTTTGTCAGGAGTTCAGTCTCGAGTCGTCCACCCGCTTTACTTTCCACAAAGAGAATTTCTGA

Retrieve as FASTA