View Redoxidase 7579

Entry information : AlyRboh05 (AlyRbohE)

Entry ID	7579
Creation	2010-08-11 (Christophe Dunand)
Last sequence changes	2010-08-11 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2015-12-10 (Catherine Mathe)

Peroxidase information: AlyRboh05 (AlyRbohE)

Name (synonym)

AlyRboh05 (AlyRbohE)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis lyrata [TaxId: 59689 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AlyRboh05 start..stop	S start..stop
AtRboh05	1854	0	1..925	1..952
NoffRboh05-1A	1687	0	1..925	1..947
NoffRboh05-1B	1684	0	1..925	1..950
TsRboh05	1641	0	16..925	16..951

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	8134541..8135213	671	N° 2	8135300..8135459	158	N° 3	8136391..8136439	47	N° 4	8136519..8136632	112
N° 5	8136716..8136800	83	N° 6	8136879..8137141	261	N° 7	8137251..8137634	382	N° 8	8137727..8137822	94
N° 9	8137906..8138021	114	N° 10	8138104..8138277	172	N° 11	8138360..8138513	152	N° 12	8138592..8138783	190
N° 13	8138865..8138993	127	N° 14	8139075..8139153	77	N° 15	8139345..8139454	108
join(8134541..8135213,8135300..8135459,8136391..8136439,8136519..8136632,8136716 ..8136800,8136879..8137141,8137251..8137634,8137727..8137822,8137906..8138021,81 38104..8138277,8138360..8138513,8138592..8138783,8138865..8138993,8139075..81391 53,8139345..8139454)

Literature and cross-references AlyRboh05 (AlyRbohE)

DNA ref.	Phytozome 12: scaffold_1 (8134541..8139454)

Protein sequence: AlyRboh05 (AlyRbohE)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	925
PWM (Da):	104466.15	Transmb domain:	o363-385i504-526o546-568i727-744o
PI (pH):	8.37

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MKLSPLSFSTSSSFSHADGIDDGVELRSSPFAGGAMLPVFLNGLSRNSGESGSSSWERELVEVTLELDVGDDSILVCGMSEAASVDSRPRSVDLVTARLSRNLSNASTRIRQKLGKLLRS
ESWKTTTSSTAGERDRDLERQTAETSGIMTARDRRREDAILQRSTSSAQRALKGLQFINKTTRGNSCDCDWDCNCDQMWKKVEKRFESLAKEGLLARDDFGECVGMVDSKEFAVSVFDAL
ARRRRQKLEKITRDELHDFWLQISDQSFDARLQIFFDMADSNEDGKITREEIKLLMLSASANKLAKLKEQAEEYASLIMEELDPENFGYIELWQLETLLLQRDAYMNYSRPLSTTSAGVN
NWQRSWVLLLWIMLMAILFVWKFLEYREKAAFKVMGYCLTTAKGAAETLKLNMALVLLPVCRNTLTWLRSTRARACVPFDDNINFHIIACAIAIGILVHAGTHLACDFPRIINSSPEEFA
LIASAFNGTKPTFKDLMTGAEGITGISMVILTTIAFTLASTHFRRNRVRLPAPLDRLTGFNAFWYTHHLLVVVYIMLIVHGTFLFFADKWYQKTTWMYISVPLVLYVAERSLRACRSKHY
SVKILKVSMLPGEVLSLIMSKPPGFKYKSGQYIFLQCPTISRFEWHPFSITSAPGDDQLSVHIRTLGDWTEELRRVLTVGKDLSTCVIGRSKFSAYCNIDTINRPKLLVDGPYGAPAQDY
RSYDVLLLIGLGIGATPFISILKDLLNNSRDEQDNEFSRSDFSWNSYTSSYTTTTPTSTHGGKKKAVKAHFYWVTREPGSVEWFRGVMEEISDMDCRGQIELHNYLTSVYDEGDARSTLI
KMVQALNHAKHGVDILSGTRVRTHFARPNWKEVFSSIARKHPNSTVGVFYCGIPTVAKELKKQAQDMSQKTTTRFEFHKEHF

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 1, 14 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAGTTATCGCCTCTGAGTTTCTCTACGAGTTCGAGTTTCAGTCACGCCGATGGAATCGATGACGGTGTTGAGTTAAGATCATCTCCATTTGCCGGCGGCGCAATGCTGCCGGTTTTT
CTCAACGGTTTGAGTCGTAACAGTGGAGAATCCGGAAGTAGTAGCTGGGAAAGAGAGCTCGTGGAGGTGACGTTGGAGCTTGACGTCGGCGATGACTCCATACTCGTTTGCGGAATGTCG
GAGGCGGCGTCTGTTGATTCTCGGCCGAGATCGGTGGATTTAGTAACCGCGAGATTGTCGAGGAATCTATCGAATGCATCTACGAGAATCCGGCAGAAACTGGGGAAATTACTGAGGTCG
GAATCTTGGAAAACGACGACGTCTTCTACCGCCGGCGAGAGAGATAGAGATCTCGAACGTCAGACGGCGGAGACTTCGGGAATTATGACGGCGAGGGATAGACGGAGAGAAGACGCGATA
TTACAGCGATCAACGTCGAGTGCGCAAAGAGCGTTAAAAGGATTACAATTTATCAATAAAACCACGAGAGGAAACAGCTGCGACTGCGATTGGGATTGCAATTGCGATCAGATGTGGAAA
AAAGTTGAGAAACGATTCGAATCGCTTGCTAAAGAAGGACTACTCGCGCGAGACGATTTTGGCGAGTGCGTTGTGGTAAGTCAAAGAAAAATCGAATATGGACCAATCCACTCATTGCCA
AATTAATATAACAAACTATATATGTTTTGAAATTTTTAAAGGGATGGTGGATTCGAAGGAATTCGCGGTCAGTGTATTCGACGCTTTGGCTCGAAGAAGGAGACAGAAACTGGAGAAGAT
AACGAGAGATGAACTTCATGACTTCTGGTTACAGATTTCTGACCAAAGCTTCGACGCCCGTCTTCAAATTTTCTTCGACATATGTACGTGTCTTTGATTCTCTCTTTCTATTTTATTTTA
AAGTCAAGTTTTGTTTTGTCTTTACGTTTATAACTGTTACGGGAATAACGCATTGCAATTAGCAAAAGCATAAGAAAACAAGTGTATTGATCCAAGTGCAACGAATATTAATCAGTTGAC
GTTAATCATTGAAGAAAACTTTATCTGTAATTGATAATTAGTTTTTTAGTATTCCGAATTCTGAATAATGTAGATGAAGTTTGATCAACTTGCAGTTTTATAAGATTGGACTAATTTTTG
TTTTTTGTGGTATTTTATCAAGTTTAGCTGATTAAATCAAATATTGAGTAAAAAATTAATGTTGTTGATTAAAGATAATGTTAGCTTACCAATCATTTCTTTGATTGGAATTTGTTATCT
CTTTAGTGAGAACTACCGCAACTTCACAATAATTTTCTACAATTTTGGGAATTATTAGGCATAAATTAAAAACATGTGTTGGTTAAGCTGAATTGTGATTGTTTCAAGGCAAATGTTTCA
CTGATATCATATTTTTGTAGAGAGATAGATACATCATTTAAATCACGTGGTGTTTTTAGCCGTTGGATCTGGTAGTTCACGCAATCAACGGTGAAAATGGTCTAATGTGTTTAAAGAATG
GGCTGTAGTTTACTTGGCCCAGTAAAACCAACTTTTACCAAATTTCCAAAAAAGTTTTCTTCTTTCAGCTTTCTCCCCGCAATAAGTTACTTGCAAGTCTTAAACTACACACCAGATGCC
AAAATGAGTTTTCAATTTTTTTTTGCCAAACATTTAATTCAGTAAAATTATGGTTACTCAATTCATTTCGTTATTCTGTCATTTTTTTTGGTTTAACGATTATACAATTCTGTTATAATT
GCAGTGTTACTAATACAAAAAAGATGCTAATATCTAGTACCGGTTTTGTCACAGGGCTGATAGCAACGAAGATGGGAAGATCACTAGAGAAGAAATCAAAGAAAAGTAACTTTCTTTTTC
AACACCGAAAATTACGTTTGAAACAATCATATGTCTCTAACAACTCTTATGATTTGAAACGCAGCTTTTGATGCTAAGTGCATCAGCAAACAAGTTAGCAAAACTCAAGGAACAAGCAGA
AGAGTACGCATCTCTGATCATGGAAGAACTTGATCCAGAGAATTTTGGATACATTGAGAGGTTCAAAACATTATATGTCATCACTCTTCAAACACACTATCGATGATTTTGTTTTGTTTT
CTAACCTTTTTGTGTTGTTTCAGTTATGGCAACTCGAGACACTCTTACTTCAGAGAGACGCATACATGAATTACAGTAGACCGCTTAGCACAACAAGCGCTGGAGTGAGAGTACACCAAG
ACGGAATCTAATCAGACCTCGTCATGTGGTTCGAAAATGTAGAAAAAAACTTCAGTGTCTGGTTCTAGATAACTGGCAAAGAAGCTGGGTTCTTTTGCTGTGGATCATGCTTATGGCCAT
CCTATTCGTCTGGAAGTTTCTTGAGTACAGAGAGAAAGCTGCGTTTAAGGTCATGGGGTATTGTTTAACCACTGCTAAAGGAGCTGCAGAGACTCTTAAGCTCAATATGGCTCTGGTTTT
ATTACCTGTCTGCAGAAACACATTGACTTGGCTAAGATCTACACGCGCTCGAGCTTGTGTTCCTTTTGATGACAACATCAATTTCCATAAGAGGTAAAAGTACAATACAACCTTCCTTCA
GTCTTTCGATTTCTCAGTTTTCATCAATACAACACTTGAGATCAACTCTTTCTCTCTCTCTGTTGTCCCGTTTGTGTGCCAGATTATTGCTTGTGCCATAGCGATTGGGATACTTGTTCA
TGCTGGTACTCATTTGGCGTGTGATTTCCCCCGGATTATAAACTCGAGTCCAGAAGAATTCGCCTTGATTGCTTCTGCCTTCAATGGTACTAAGCCCACATTCAAAGACCTGATGACAGG
TGCAGAAGGAATCACTGGGATCTCGATGGTGATCTTGACAACCATCGCATTCACATTAGCATCAACTCATTTCAGGAGAAACCGTGTGAGGCTTCCGGCACCACTTGATCGGTTGACTGG
CTTTAACGCATTCTGGTACACTCATCACCTTCTAGTGGTTGTCTACATCATGCTCATTGTCCACGGTACCTTCCTGTTCTTTGCTGATAAGTGGTATCAGAAAACTCTGTAAGCATCAGC
AAACATAATCGCTCTTTACTTTAAACCGAAATGCCAAATTTCTAGAAACCTAAATTATTGTTGATTACCGGTGTCCTCAGACTTGGATGTACATCTCGGTTCCTTTGGTGCTCTATGTGG
CAGAACGAAGTCTGCGAGCTTGTAGGTCAAAGCATTACTCTGTCAAAATCCTCAAGAGGCAACTACCACAAACCCAGCAAATTCATTCCTGTTAAAAGGTGTTTTAATAACAAAATAGAC
CTTTCAATATGATCTCTGCAGGTTTCTATGCTACCTGGAGAAGTACTCAGCTTAATCATGTCAAAGCCTCCTGGATTCAAGTACAAGAGCGGTCAATACATATTCTTGCAGTGTCCAACT
ATCTCTCGATTTGAATGTGGTGAGTACTGATACCGACTTCCCATAGTGTTAACAAACATCTCAGGTTCCACTCAAAAAAGATATTCCCTAAACTTTTCCAGGCACCCATTTTCTATTACC
TCTGCACCAGGAGATGACCAACTTAGTGTTCACATCCGAACACTCGGAGACTGGACAGAGGAGCTACGACGAGTTCTAACTGTGGGCAAAGATCTTTCAACATGCGTGATTGGGCGTTCA
AAATTCTCTGCCTATTGCAATATTGATACAATAAAAAGTATATTTCCAGACACCTTTGCTTTCTCTTTTCTACACTTGGAAACCTAGTATTAACATGCTTGTTGATCTTGCATTGGCAGC
CGACCGAAATTACTAGTAGACGGCCCATATGGAGCTCCAGCACAGGACTACAGAAGCTATGATGTCTTACTCCTCATTGGATTGGGAATAGGAGCTACTCCTTTCATAAGTATCCTGAAG
GATCTCCTGAACAATTCAAGAGACGAACAAACACAGTAAGTCCAATTCAGTGCACCAGAAAAGTTAGTCTTTTCAAGAACCAAATACATATCTCTTAACTTTCAATGGCACAGGACAATG
AATTCAGCAGATCGGATTTCAGCTGGAATAGCTATACCTCTTCATATACCACAACAACCCCAACTTCAACACATGGAGGGAAAAAGAAAGCAGTGAAGGCTCACTTTTACTGGGTCACAA
GGGAGCCAGGATCCGTTGAATGGTTTAGAGGAGTAATGGAAGAAATATCAGACATGGACTGCAGAGAGTAATAACACCAGCATATCATTCATTTTCATCACCACTTTAACGTTGATCGAT
ATTCTAACATACTCATCTCGTAATACAGGGCCAGATTGAGTTGCACAACTACCTTACAAGCGTATATGATGAAGGTGATGCAAGATCAACCCTGATAAAAATGGTTCAGGCTTTGAACCA
TGCCAAACATGGAGTTGATATTCTATCCGGAACACGGGGGTAAGAACTGTTGCAGGGCATATAACCAGAAACTATTTCCCAATACTACCTATAACTGACAAGATAACATCATTCCAACAG

GTGAGAACACATTTTGCAAGGCCCAACTGGAAGGAAGTCTTCAGTAGCATAGCAAGAAAGCATCCAAATTCGACAGTCGCGGTAAATATTCTATACAATCAGCTGCTTACCAACAAGACA
TCTGATAAACCTCTCTTCTAGGACTAATGAATTAGTACCATTGGAAAAGAAAGAAAATTTAGCAATAAGAATTAATGACACAGGCAAACACATGAACCTATTTAGGCCAGGTATTACGAA
GGATATGTGAAAACCATTTATTAACTGTGCAGGCGTGTTTTACTGCGGCATACCAACCGTGGCAAAGGAGTTGAAGAAGCAAGCACAAGACATGAGTCAAAAAACAACCACACGGTTCGA
ATTCCATAAGGAGCATTTCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA