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Entry information : AlyRboh04 (AlyRbohD)
Entry ID 7583
Creation 2010-08-11 (Christophe Dunand)
Last sequence changes 2010-08-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyRboh04 (AlyRbohD)
Name (synonym) AlyRboh04 (AlyRbohD)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyRboh04
start..stop		 S start..stop
AtRboh04 1864 0 1..920 1..921
NoffRboh04-1B 1819 0 1..920 1..920
NoffRboh04-1A 1798 0 1..920 1..920
TsRboh04 1742 0 3..920 1..928
Gene structure Fichier Exons►


exon

Literature and cross-references AlyRboh04 (AlyRbohD)
DNA ref. Phytozome 12:   scaffold_8 (9954828..9959005)
Protein sequence: AlyRboh04 (AlyRbohD)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   920
PWM (Da):   %s   103742.54 Transmb domain:   %s   o377-396i517-539o559-581i739-756o
PI (pH):   %s   9.66
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKMRRGNSSTDHELGILRGANSDTNSDTESIASDRGAFSGPLGRPKRASKKNARFADDLPKRSNSVAGGRGDDDEYVEITLDIRDDSVAVHSVQQAAGGGAHLEDPELALLTKKTLESSL
NNTTSLSFFRSTSSRIKNASRELRRVFSRRPSPAVRRFDRTSSAAIHALKGLKFIATKTAAWPAVDQRFDKLSADSNGFLLSSKFWECLGMNKESKDFADQLFRALARRNNISGDAITKE
QLRIFWEQISDESFDAKLQVFFDMVDKDEDGRVTEEEVAIISLSASANKLSNIQKQAKEYAALIMEELDPDNAGFIMIENLEMLLLQAPNQSVRMGDSRILSQMLSQKLKPAKESNPLVR
WSEKIKYFILDNWQRLWIMMLWLGICGGLFTYKFIQYKKNKAAYDVMGYCVCVAKGGAETLKFNMALILLPVCRNTITWLRNKTKLGTVVPFDDNLNFHKVIASGIVVGVLLHAGAHLTC
DFPRLIAADEETYEPMEKYFGEQPENYWWFVKGVEGWTGIVMVVLMAIAFTLATPWFRRNKLNLPKFLKKLTGFNAFWYSHHLFIIVYALLIVHGIKLYLTKIWYHKTTWMYLAVPILLY
ASERLLRAFRSSIKPVKMLKVAVYPGNVLSLHMTKPQGFKYKSGQYMFVNCRAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRKLRTVFSEVCKPPTAGKSGLLRADGGDGNLPFPKV
LIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISILKDIINNMKSPDSDIENNNSNNNSKGFKTRKAYFYWVTREQGSFEWFKGIMDEVSELDEEGIIELHNYCTSVYEEGDARVALIAML
QSLQHAKNGVDVVSGTRVKSHFAKPNWRQVYKKIAVQHPGKRIGVFYCGAPGLTKELKNLALDFSRKTTTKFDFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 8, 7 introns).
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