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Entry information : AlyRboh07 (AlyRbohG)
Entry ID 7585
Creation 2010-08-11 (Christophe Dunand)
Last sequence changes 2010-08-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyRboh07 (AlyRbohG)
Name (synonym) AlyRboh07 (AlyRbohG)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyRboh07
start..stop		 S start..stop
AtRboh07 1657 0 1..860 1..849
NoffRboh07-1B 1387 0 59..860 2..786
TsRboh07-2 1369 0 43..860 7..818
TsRboh07-1 1321 0 43..860 7..818
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7585' 'join(7293806..7294241,7294320..7294476,7294591..7294639,7294891..7295004,7295092..7295529,7295754..7296146,7296221..7296432,7296517..7296619,7296732..7296784,7297766..7298283,7298630..7298739)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7293806..7294241 434 N° 2 7294320..7294476 155 N° 3 7294591..7294639 47 N° 4 7294891..7295004 112
N° 5 7295092..7295529 436 N° 6 7295754..7296146 391 N° 7 7296221..7296432 210 N° 8 7296517..7296619 101
N° 9 7296732..7296784 51 N° 10 7297766..7298283 516 N° 11 7298630..7298739 108  
join(7293806..7294241,7294320..7294476,7294591..7294639,7294891..7295004,7295092 ..7295529,7295754..7296146,7296221..7296432,7296517..7296619,7296732..7296784,72 97766..7298283,7298630..7298739)


exon

Literature and cross-references AlyRboh07 (AlyRbohG)
DNA ref. Phytozome 12:   scaffold_7 (7293806..7298739)
Protein sequence: AlyRboh07 (AlyRbohG)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   860 (311)
PWM (Da):   %s   97537.67 (33296.8) Transmb domain:   %s   o311-333i455-477o499-521i674-691o
PI (pH):   %s   9.59 (8.39) Peptide Signal:   %s   cut: 25 range:25-335
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQRVSFEVTDTEAEKSSSETVPLSGAGALPSTFKNPAMENVGNAA
DDGPSVKNNPKLNAQKQNGLVKLLASVSNQLMKCLTLVTRESKTPRLDRSKSTAGQALKGLKLISKTDGNAAWTV
VEKRYLKITANTDGLLLRSKFGECIGMNSKEFALELFDALARKSHLKGDVITETELKKFWEQINDKSFDSRLITFFDLMDKDADGRLTEDEVRIINLSSSANHLSCIQKKADEYAAMIME
ELDPDHMGYIMMESLKKLLLQAETKSLSTTNSEERKELSDMLSESLKPTRDPNHLRRWYRQLRFFVLDSWQRIWVIALWLAIMAILFAYKYIQYKNRAVYEVLGPCVCLAKGAAETLKLN
MALILLPVCRNTITWLRNKTSWLGVFVPFDDNLNFHKVIAVGITIGVGIHSVAHLACDFPRLIAATPAQYMPLEKFFGEEQPKRYLHFVKSTEGITGLVMVLLMVIAFTLAMPWFRRGKL
EKKLPGPLKKLASFNAFWYTHHLFVIVYILLVLHGYYLYLSKEWYKKTTWMYLAVPVALYAYERLIRAFRSSIRTVKVLKVAAYPGKVLTLQMSKPTNFKYKSGQYMFVNCPAVSPFEWH
PFSITSTPQEDYLSVHIKSLGDWTEAIQGVFSVSKPPPVGDMLHGANSPGFPKIMIDGPYGAPAQDYKKYEVVLLIGLGIGATPMISIIKDIINNTETKEQLSQMEKGAPQEQQVKKETF
KTRRAYFYWVTKEQGTFDWFKNVMNEIAERDKSKVIELHNHCTSVYEEGDVRSALIRMLQSLNYAKNGLDIVAGTRVMSHFARPNWKNVYKQIAMDHPGANGVFYCGAPVLTKELRHLAL
EFTHKTSTRFSFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, 10 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGAGAGTTAGCTTTGAAGTGACGGATACAGAGGCGGAGAAGAGCAGCAGCGAGACAGTTCCACTGAGCGGAGCCGGAGCTTTGCCGTCGACCTTCAAAAATCCGGCGATGGAAAAC
GTTGGAAACGCGGCGGATGATGGACCGAGCGTGAAGAACAATCCGAAACTGAATGCGCAGAAACAGAACGGTCTGGTGAAGTTGCTCGCCTCAGTTTCTAACCAGCTCATGAAGTGTTTG
ACATTGGTCACTAGAGAGAGTAAGACACCTCGATTGGACCGGTCGAAGTCAACGGCCGGTCAGGCCTTGAAAGGGCTCAAGCTCATTAGTAAGACCGACGGCAACGCTGCCTGGACGGTC
GTGGAGAAGCGGTACTTGAAGATCACGGCCAATACTGATGGATTGCTGCTTCGGTCAAAATTCGGTGAATGCATAGAGGTAAGATTTTGTAAATTCGAGGAATTGTGACAAATATATGAT
TTGGATCTAAATTGGAATATCGATGACATTTTGCAGGGATGAACTCAAAAGAATTTGCCTTGGAATTGTTCGACGCATTAGCTAGAAAAAGTCACCTGAAAGGGGATGTGATTACTGAGA
CCGAGTTGAAGAAATTTTGGGAACAAATAAATGATAAAAGCTTTGATTCCAGGCTTATCACGTTCTTTGACTTTTGTAATTTTTTTTAGTTATTACACATTTGTTCTTTCGTTTTATTTC
TCTGGATCTCTAAACGTTTTGGTAAAATGAATGTAAAGTTTGAGCCAAAGGGGTTTGTTTCAAATGCAGGATGGATAAAGACGCCGATGGTAGACTAACCGAAGATGAAGTTAGAGAGAG
GTAAAACTATTTACCAATGAGGTCTTGATTGTTTCAAATGTTGATTTCTGCATTTACATGCAAAAAAATTTCACTGTCACTATTTTTGTGTGTAAATTTTACAGCGACAAAATTTTGCAA
GTTCATTTAGAAAAAAGAAATGCAAACAAACAATCAATATACATATTTTAATTATTTTCTTTGAAAATCTTAGAAATGTTTAATGGGTGGAAGATTTTTTGAACTGTGCTCTGTATTTTT
GGGTTTCGCAGATCATCAATCTTAGTTCGTCTGCCAACCATCTGTCATGCATCCAGAAAAAGGCAGATGAATATGCAGCAATGATAATGGAAGAGCTTGACCCTGATCATATGGGATACA
TCATGTGGTAAACTAACTTGATGATGGTCTGAAAACCGATATTTTCTTTTTAATATTGCTTCTATTAGTAACTTTTGTGGTGAATTTAAAACAGATGGAGAGTCTTAAGAAATTGCTTCT
GCAAGCGGAAACAAAATCTTTAAGCACAACTAATAGTGAAGAAAGAAAGGAGCTGAGCGATATGCTAAGTGAGAGTCTTAAGCCTACGCGTGACCCTAACCATTTGAGGAGATGGTACCG
TCAACTAAGATTCTTCGTACTGGATAGCTGGCAAAGAATTTGGGTGATAGCGTTATGGCTCGCGATTATGGCCATCCTCTTCGCGTACAAATATATTCAATACAAGAATAGAGCAGTGTA
TGAAGTCTTGGGGCCTTGTGTGTGCTTGGCTAAAGGTGCAGCAGAGACGTTGAAGCTAAACATGGCCTTAATTCTGTTACCTGTATGCAGAAATACCATCACATGGCTTAGAAATAAGAC
TAGCTGGTTGGGTGTTTTTGTCCCTTTTGATGACAACCTCAATTTTCATAAGAGGTAAAACCACACATTTTTCTTGCTATTTTTAACAATTATGGTTGAGGAATCGTCCTATCGCTCGAG
GATATGGATCAAATCATCTATCACACTTTTATGTAGGTCAATATAGACGTTATAAATGAAGAAAAAAACATAGTTCTTACATGCTTCTAAAATTAATAACCTAGTTATAAAAGAACACCG
TTATATCATTTATAGTAACTTCATGCCTCAACCTACAGGTTATAGCGGTGGGAATTACGATAGGAGTAGGCATACACTCGGTGGCCCACTTGGCATGTGATTTTCCACGGCTAATCGCAG
CAACTCCAGCGCAATACATGCCTCTCGAGAAATTCTTCGGGGAGGAGCAACCAAAGAGGTACTTGCATTTTGTGAAGTCAACAGAAGGAATAACAGGGCTTGTAATGGTCCTCTTGATGG
TTATTGCTTTTACACTGGCTATGCCTTGGTTTAGACGAGGGAAGCTAGAAAAAAAGCTTCCAGGGCCACTAAAGAAACTCGCGAGCTTCAACGCCTTCTGGTACACTCACCATTTGTTTG
TTATAGTCTACATTCTACTTGTCCTTCACGGATACTACTTGTACCTCAGTAAGGAATGGTACAAGAAAACGCGGTGAGTATTTGATCAATGTCCAACATTTTTGTATCTTTGAAAAATGG
TACTAAGTCGGGGGGTTTTGTTTGTAGACGTGGATGTACTTGGCAGTACCAGTAGCTCTCTATGCATACGAGAGATTGATACGAGCATTCAGGTCCAGCATCAGGACTGTAAAAGTTCTT
AAGGTCGCGGCTTACCCTGGAAAAGTGTTGACTTTGCAAATGTCAAAGCCTACAAACTTCAAATACAAGAGCGGTCAATACATGTTTGTAAATTGTCCAGCAGTCTCACCGTTTGAGTGT
GGTACGCCAAAAACAAACTTAAAAGAGTAACAACTCTAAACCCATTTCAATATCAATGCATGTGATTGTATACATATCTCTCCAGGCATCCATTTTCAATAACTTCAACACCACAAGAAG
ACTATCTGAGCGTTCATATAAAATCACTGGGAGATTGGACAGAGGCTATCCAAGGAGTTTTCTCCGAGAGGTATATATATATTATTTACTTCTAAATCTTAGCTTACGAAATTATATCTT
TGGTAAGTCTTGGAGTCGATGAAAGATATATAGTTTGAGAAGCATCTTGTGTTATATTTCAGGTGTCTAAGCCACCTCCGGTCGGAGACATGTTGCATGGTGCAAATAGTCCCGGGGGTA
AGTATAGTCATCGCATACGTAAATGAGTGACATTTGATTTGTGGTAAGAAAATATCACGTTTTACTTGTCTTTATAAAACACAATATACAAATAATAACCGCAATGCTATATATGAATTA
TTAAAAAAAATGCATGTTGTTGAAAAACGAAAACCATTTATATGTGTATTCAACTATATACAATTAAAAAATCACACTATGAAGTATGAACATGAGTGAGAAAAACATCTATAACTGAAT
CCCATAAAGATATAGCTAGTCATACACGCAAACTAAAAAAAATCAATATCAAAACGAGCCATCAACACCTAAATTAGCTAATGTGATATTACATTAGTTAAAAAAGAAAGAAAGCAGAAT
GCATCTTTCAAGGTCATTATATAAATATGTAGAATAACACCTACCTATTCTTGGTCGTCATTTAGACGACTAGGAAACATCATTTGATTAAATAATCATGTTCTCACTGGTTCTCTTTGT
TAAGCTATGTTTTTGTCCGCAAAGTCTTGGATTCCGAAGATCAGCCGGCCAGTCTGGCTTTTCTTAATATATATGTAAAAGTAGACGTCATTTACAACCACTACTACTATAATATGGATA
TTTATAATATCACATTCTGTAAATAATATTAAATGTAGAGATATGAATGATATTTAATTTTTAAAAAATCATTTGGTAGATGAAAACTTCAGATGCATGAGGATATATTTTCATTGCGTT
TTAAGTTTTCATTTCGTGTCTGAGTCTTAAAATTATATATAACAACTTTACCTATGCCATATATTCCATCTATTACTCATACACATACATTCACATATATGTATTTCATACATCAAAAAA
ACATGTGTGGATATAGGGGAAATTGCATATCAACATATCACATATGTGTGTGTGCGTACACATTCTTTGTTGTTGGAAAATTAATCTACCTAAGATTTTCTAATAATTTTGAAATGGCAA
TGACCTCTTCTTCCGCAGTTTTCCCAAAATTATGATTGATGGTCCGTACGGCGCACCAGCTCAAGACTACAAGAAGTACGAGGTGGTTCTGCTGATCGGTCTTGGCATTGGAGCCACCCC
GATGATCAGCATTATCAAGGACATTATCAACAATACGGAGACCAAGGAGCAGCTCAGCCAAATGGAGAAGGGGGCTCCACAGGAGCAACAAGTTAAGAAAGAAACTTTCAAGACGCGAAG
GGCTTACTTCTACTGGGTAACAAAGGAGCAGGGTACATTTGATTGGTTCAAGAACGTCATGAACGAGATTGCAGAACGAGACAAAAGCAAAGTCATAGAACTACACAATCATTGCACTAG
TGTCTACGAAGAAGGAGACGTTCGTTCCGCACTCATACGGATGCTTCAGTCTCTAAATTATGCCAAGAATGGTTTAGACATTGTTGCTGGGACAAGGGTCATGTCCCATTTCGCCAGACC
TAATTGGAAAAATGTTTACAAACAGATTGCCATGGATCACCCTGGTGCTAATGTTGTGGTAAGCTCGTTATCTCCCTCGTCAAATCAACCAGTAAGCGTATGGTTGTTGTGTTTTGGTTT
GGTTGTCAAAAAGTAATATTATATCAAGTACAAACCCTTATTAATTGTGATGCTTTGTTATAGGCATGCTTGCATCAACTTGCATGATATTATGATCTTCATATTGCACTATCACAGTCA
GTTCATACAAAACAAAATTAGCTTAGTTTCATAATTTTTACATACAGGTTATAGTAACAAAGGTGTAGAATATGATTTGATATTTTGTTTTTAAAATCATCTTATAATCTATTTAATGAC
TATAAAGAAATGATATAAACTGAAAATGTATACATAACGTGCAGGAGTGTTCTATTGTGGAGCACCGGTATTGACGAAGGAGTTAAGGCATCTAGCTTTGGAATTCACACACAAGACAAG
TACTAGATTCTCTTTCCACAAAGAGAACTTCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGAGAGTTAGCTTTGAAGTGACGGATACAGAGGCGGAGAAGAGCAGCAGCGAGACAGTTCCACTGAGCGGAGCCGGAGCTTTGCCGTCGACCTTCAAAAATCCGGCGATGGAAAAC
GTTGGAAACGCGGCGGATGATGGACCGAGCGTGAAGAACAATCCGAAACTGAATGCGCAGAAACAGAACGGTCTGGTGAAGTTGCTCGCCTCAGTTTCTAACCAGCTCATGAAGTGTTTG
ACATTGGTCACTAGAGAGAGTAAGACACCTCGATTGGACCGGTCGAAGTCAACGGCCGGTCAGGCCTTGAAAGGGCTCAAGCTCATTAGTAAGACCGACGGCAACGCTGCCTGGACGGTC
GTGGAGAAGCGGTACTTGAAGATCACGGCCAATACTGATGGATTGCTGCTTCGGTCAAAATTCGGTGAATGCATAGGGATGAACTCAAAAGAATTTGCCTTGGAATTGTTCGACGCATTA
GCTAGAAAAAGTCACCTGAAAGGGGATGTGATTACTGAGACCGAGTTGAAGAAATTTTGGGAACAAATAAATGATAAAAGCTTTGATTCCAGGCTTATCACGTTCTTTGACTTGATGGAT
AAAGACGCCGATGGTAGACTAACCGAAGATGAAGTTAGAGAGATCATCAATCTTAGTTCGTCTGCCAACCATCTGTCATGCATCCAGAAAAAGGCAGATGAATATGCAGCAATGATAATG
GAAGAGCTTGACCCTGATCATATGGGATACATCATGATGGAGAGTCTTAAGAAATTGCTTCTGCAAGCGGAAACAAAATCTTTAAGCACAACTAATAGTGAAGAAAGAAAGGAGCTGAGC
GATATGCTAAGTGAGAGTCTTAAGCCTACGCGTGACCCTAACCATTTGAGGAGATGGTACCGTCAACTAAGATTCTTCGTACTGGATAGCTGGCAAAGAATTTGGGTGATAGCGTTATGG
CTCGCGATTATGGCCATCCTCTTCGCGTACAAATATATTCAATACAAGAATAGAGCAGTGTATGAAGTCTTGGGGCCTTGTGTGTGCTTGGCTAAAGGTGCAGCAGAGACGTTGAAGCTA
AACATGGCCTTAATTCTGTTACCTGTATGCAGAAATACCATCACATGGCTTAGAAATAAGACTAGCTGGTTGGGTGTTTTTGTCCCTTTTGATGACAACCTCAATTTTCATAAGGTTATA
GCGGTGGGAATTACGATAGGAGTAGGCATACACTCGGTGGCCCACTTGGCATGTGATTTTCCACGGCTAATCGCAGCAACTCCAGCGCAATACATGCCTCTCGAGAAATTCTTCGGGGAG
GAGCAACCAAAGAGGTACTTGCATTTTGTGAAGTCAACAGAAGGAATAACAGGGCTTGTAATGGTCCTCTTGATGGTTATTGCTTTTACACTGGCTATGCCTTGGTTTAGACGAGGGAAG
CTAGAAAAAAAGCTTCCAGGGCCACTAAAGAAACTCGCGAGCTTCAACGCCTTCTGGTACACTCACCATTTGTTTGTTATAGTCTACATTCTACTTGTCCTTCACGGATACTACTTGTAC
CTCAGTAAGGAATGGTACAAGAAAACGACGTGGATGTACTTGGCAGTACCAGTAGCTCTCTATGCATACGAGAGATTGATACGAGCATTCAGGTCCAGCATCAGGACTGTAAAAGTTCTT
AAGGTCGCGGCTTACCCTGGAAAAGTGTTGACTTTGCAAATGTCAAAGCCTACAAACTTCAAATACAAGAGCGGTCAATACATGTTTGTAAATTGTCCAGCAGTCTCACCGTTTGAGTGG
CATCCATTTTCAATAACTTCAACACCACAAGAAGACTATCTGAGCGTTCATATAAAATCACTGGGAGATTGGACAGAGGCTATCCAAGGAGTTTTCTCCGAGGTGTCTAAGCCACCTCCG
GTCGGAGACATGTTGCATGGTGCAAATAGTCCCGGTTTTCCCAAAATTATGATTGATGGTCCGTACGGCGCACCAGCTCAAGACTACAAGAAGTACGAGGTGGTTCTGCTGATCGGTCTT
GGCATTGGAGCCACCCCGATGATCAGCATTATCAAGGACATTATCAACAATACGGAGACCAAGGAGCAGCTCAGCCAAATGGAGAAGGGGGCTCCACAGGAGCAACAAGTTAAGAAAGAA
ACTTTCAAGACGCGAAGGGCTTACTTCTACTGGGTAACAAAGGAGCAGGGTACATTTGATTGGTTCAAGAACGTCATGAACGAGATTGCAGAACGAGACAAAAGCAAAGTCATAGAACTA
CACAATCATTGCACTAGTGTCTACGAAGAAGGAGACGTTCGTTCCGCACTCATACGGATGCTTCAGTCTCTAAATTATGCCAAGAATGGTTTAGACATTGTTGCTGGGACAAGGGTCATG
TCCCATTTCGCCAGACCTAATTGGAAAAATGTTTACAAACAGATTGCCATGGATCACCCTGGTGCTAATGTTGGAGTGTTCTATTGTGGAGCACCGGTATTGACGAAGGAGTTAAGGCAT
CTAGCTTTGGAATTCACACACAAGACAAGTACTAGATTCTCTTTCCACAAAGAGAACTTCTAA

Retrieve as FASTA