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Entry information : AlyRboh[P]G
Entry ID 7586
Creation 2010-08-11 (Christophe Dunand)
Last sequence changes 2010-08-11 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-01-28 (Christophe Dunand)
Peroxidase information: AlyRboh[P]G
Name AlyRboh[P]G
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyRboh[P]G
start..stop		 S start..stop
AlyRboh07 1124 0 1..647 215..860
AtRboh07 1121 0 1..647 204..849
NoffRboh07-1B 1119 0 1..647 151..786
TsRboh07-2 1110 0 1..647 172..818
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6723719..6723832 112 N° 2 6723203..6723580 376 N° 3 6722601..6722995 393 N° 4 6722307..6722518 210
N° 5 6722113..6722218 104 N° 6 6721607..6721756 148 N° 7 6721234..6721579 344 N° 8 6720713..6720822 108
complement(join(6720713..6720822,6721234..6721579,6721607..6721756,6722113..6722 218,6722307..6722518,6722601..6722995,6723203..6723580,6723719..6723832))


exon

Literature and cross-references AlyRboh[P]G
DNA ref. Phytozome 12:   scaffold_8 (6723832..6720713)
Protein sequence: AlyRboh[P]G
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   647
PWM (Da):   %s   73913.29 Transmb domain:   %s   o96-118i238-260o284-306i459-476o
PI (pH):   %s   9.46
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
IISLSSSANHLSTIKTNADGYAAMIMKVLDKDNIGYIMMGSLKSLLLEAETHSISTNSEERKKLGDMISNKLKPTLDPNPLKRWYHKLRFFVLDNWQRIWVIVLWLMIMAILFIYKYIQY
KNREVYEVLGHCVCLAKGAAETLKLNMALILLPVCRNTITWLRTKTSLGVIVPFDDNLNFHQVIAVGIMIGVAIHSVTHLACDFPRLIAATPEEYMPLRKFFGEEQPKRYLHFVKSTEGI
TGLIMVFLMAIAFTLAIPWFRRGKLEKKLPEPLKKLASFNAFWxYTHHLFVIVYILLVLHGYNLYLSKEWYKKTTWMYLAVPVAFYACERLIRAFRSKMETVKVIKAATYPGNVLTLHMS
RPTNFEYKSGQYMFVNCPAVSPFEWHPFSITSAPHDEYLSVHIKSLGDWTKAIKGVFSEVSMPLPVGEMSHGANNSDFPRIMIDGPYGAPAQDYKKYEVVLLIGLGIGATPMISIIKDII
NNTETKELSQVDLGKVGSQHEPQGEKETFKTRRAYFYWVTREQGSYDWFKNIMNEIAERDKNKVIELHNYCTSVYEEGDVRSAFIHMLQSLNHAKSGLDIVSGTKVMSYFAKPNWENIYK
QIAMDHPGSNVGVFYCGAPALTKELRNLALEFAHKTRTRFSFHKENF

Retrieve as FASTA  
Remarks Partial sequence from genomic (chromo 8). Undetermined sequence downstream.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATCATTAGTCTTAGTTCGTCTGCCAACCATCTTTCAACCATAAAGACAAATGCAGATGGATATGCAGCAATGATAATGAAAGTGCTTGACAAAGATAATATTGGATACATCATGGTAAGT
TTTCTTGAAGATAACCCGAGGATCGATAATTTTTCGATTACTACTTGTGTTTGTAACTTTGTGGTGAATTTAAAACAGATGGGTAGTCTTAAATCCTTGCTTCTGGAAGCTGAAACACAT
TCCATCAGCACAAAAACAGTGAAGAAAGAAAGAAGTTGGGCGACATGATAAGTAACAAGCTTAAGCCTACACTTGACCCTAACCCGTTGAAGAGATGGTACCATAAACTTAGATTCTTCG
TACTGGATAACTGGCAAAGAATTTGGGTAATAGTGCTATGGCTCATGATTATGGCCATCCTCTTCATATACAAATATATTCAATACAAGAATAGAGAAGTGTATGAAGTGTTGGGGCATT
GTGTGTGCTTGGCTAAAGGTGCAGCTGAGACACTGAAGCTGAACATGGCCTTGATTCTGTTACCTGTATGCAGAAATACCATTACATGGCTTAGAACTAAAACTAGTTTGGGTGTTATTG
TCCCTTTTGATGACAACCTCAACTTTCATCAGGTAAAACCACATTTGATTTTGTTATTTTCAACCATCTATGGTAGATATAAACGTTTTAAATGAAAAGAAACATAGTTTGTACGTGCTT
TAAAATTACTCTGAACTGTCCTTACCTAGTTATAAGAAAACACTCTTTTTTAATAAAATTGCAAAAATATCTCTCATTCTTATTATGATATATAGCAAAATTGATGGCCAAACCTACAGG
TGTTATAGCGGTGGGAATCATGATAGGAGTAGCCATACACTCGGTGACCCACTTGGCGTGCGATTTTCCACGGCTAATTGCGGCAACTCCAGAGGAATACATGCCTCTACGAAAATTCTT
TGGAGAAGAGCAACCAAAGAGATACTTGCATTTTGTGAAGTCAACAGAAGGAATAACAGGACTCATAATGGTTTTCTTGATGGCAATTGCTTTTACACTAGCTATCCCTTGGTTTAGACG
AGGGAAGCTCGAAAAAAAGCTTCCAGAGCCACTAAAGAAACTAGCTAGCTTCAATGCCTTCTGGTATATACTCACCATTTGTTCGTGATAGTATACATTCTCCTTGTCCTTCACGGATAC
AACTTGTATCTCAGCAAAGAATGGTACAAGAAAACGGTAAGTAGTTCGATATTCAACATTTTCAATCGTATAATCTTCGCGTTTAGAAATGTAACAAACTTGCTTATTTTGTTTGTAAAC

ACGTGGATGTACTTGGCAGTACCAGTAGCTTTCTATGCATGTGAGAGATTAATACGAGCATTTAGGTCCAAAATGGAGACGGTAAAAGTTATTAAGGCTGCGACTTATCCTGGAAACGTA
TTGACATTGCACATGTCAAGGCCTACAAACTTCGAATACAAGAGCGGTCAATACATGTTTGTAAACTGTCCAGCAGTCTCACCGTTTGAGTGGTATGCAAAAATCACTCTTTAAGAGACA
ACAACTCTAAACTCATCTCAATATCATCTCACGTGATTATATATATATATATAACTACATGCGCATCCATTTTCAATAACTTCTGCACCACATGACGAGTATTTAAGTGTTCATATAAAA
TCACTTGGAGATTGGACAAAGGCTATCAAAGGAGTTTTCTCCGAGGTCTTTTTTACTTCTAAATCTCTCAAAATTTTAAGAAATATTATAAGTCTTGAAGTCGGGGAAAGATAGTTAATT
TGAGAAAGATTTTGTGTTATATCTCAGGTATCTATGCCACTTCCGGTCGGAGAGATGTCGCATGGTGCAAATAATTCCGAGTAAGTTTTTTATTTTTTTGGGCAAAATAATTCCGAGTAA
ATATATTCACAAATTTGACACAAAAACCAACAGTAAGTATAAACAAAAATTTGAAAAATCGCTAAAAGTATACATATACCATTATGTTTTCTTGGACTATTATTCTACCTAAGAAAACTT
AGTGTTTTTTATTTTGTTATGGCAATGACCCCTCCTTCCACAGTTTTTCCCGAGAATTATGATTGATGGTCCGTACGGCGCACCAGCACAAGACTACAAGAAATACGAGGTGGTTCTGCT
GATCGGCCTTGGGATTGGAGCCACCCCAATGATAAGTATTATTAAGGACATAATCAATAATACGGAGACCAAAGAACTTTCTCAAGTTGACCTAGGGAAGGTGGGGGATCACAACATGAG
CCACAAGGTGAAAAAGAAACTTTCAAGACGCGAAGGGCTTACTTCTACTGGGTAACAAGGGAGCAAGGCTCATATGATTGGTTCAAGAACATCATGAACGAGATTGCTGAGCGGGACAAA
AATAAAGTCATAGAACTACACAACTATTGCACTAGCGTCTATGAAGAAGGAGACGTTCGTTCAGCGTTCATACATATGCTTCAGTCTCTAAACCATGCCAAGAGTGGTTTAGACATTGTC
TCTGGGACCAAGGTTATGTCCTACTTTGCCAAACCTAATTGGGAAAACATTTACAAACAGATAGCCATGGATCACCCTGGCTCTAATGTTGGTAAGCTCTCTCACTTTCCCTCATACATG
GTTGGTTAATTTGGTTCTCTTGTAACAAGATTTAATTTTGATGCATTTTTAAAGACATGCTTGCATCGACTTGCAAGAAATTCTCAATGGCATATCGCACTATCGACTCATATCATGCAA
AGATTAGCTTAGGCTCATGCTTTTTTTTTCGGTCTTGCATTATGCGGTAACCCGGTAGTGTCGTACACAGACACTAGCAAAAACTATTATACTACATGTCTTAGTAAACTTTATGAGTTT
CACATGTTCAAAGTCATTGGTGCATGTTATAGTAACTATGCTCTAGAATATTTTTTTGGTATTATAAAATATCATTGTGTGATTATGATTAATTACTATAAAAAAAAAAAAGAGAATGAT
ACAAGTTGACATAAACGTGCAGGAGAGTGTTTTATTGTGGAGCCCCGGCATTGACAAAGGAGTTAAGGAATTTAGCTTTGGAATTCGCACATAAGACAAGAACTAGATTCTCCTTCCACA
AAGAAAACTTTTAA

Retrieve as FASTA