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Entry information : Ab1CysPrx_bisporus
Entry ID 7587
Creation 2010-08-16 (Christophe Dunand)
Last sequence changes 2012-04-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-10 (Christophe Dunand)
Peroxidase information: Ab1CysPrx_bisporus
Name Ab1CysPrx_bisporus
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Agaricaceae Agaricus
Organism Agaricus bisporus    [TaxId: 5341 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ab1CysPrx_bisporus
start..stop		 S start..stop
Pc1CysPrx01 385 1.88e-138 1..221 1..221
Lbi1CysPrx 384 4.65e-138 1..221 1..221
Athi1CysPrx01 384 1.02e-137 1..221 1..221
Pcar1CysPrx01 384 1.05e-137 1..221 1..221
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 813356..813451 94 N° 2 813500..813706 205 N° 3 813757..813849 91 N° 4 813903..814008 104
N° 5 814116..814246 129 N° 6 814307..814339 31  
join(813356..813451,813500..813706,813757..813849,813903..814008,814116..814246, 814307..814339)


exon

Literature and cross-references Ab1CysPrx_bisporus
DNA ref. JGI genome:   scaffold_4 (813356..814339)
Protein sequence: Ab1CysPrx_bisporus
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   221
PWM (Da):   %s   24902.8 Transmb domain:   %s   o367-389i449-471o509-531i544-566o581-599i733-750o
PI (pH):   %s   6.61
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPSLRLGDTAPDFEAETTTGNIKFHEWIGNSWAILFSHPGDFTPVCTTELGEVARRAPDFQKRDVKLIGISANGLEDHHAWVKDINEYGSKFGHTDVRFPIIADGDRKISTLYDMLDYQD
ATNRDAKGLPFTIRTVFVIDPKKTIRLMIAYPASTGRNFDEIIRYVLSLQLGDKHRITTPVNWNKGDDVIVHPSVTSEEAKVLFPEHTVHPYLRTTPLKV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTCCCTTCGCCTAGGTGATACCGCCCCCGACTTTGAAGCTGAAACTACCACAGGAAATATCAAGTTCCATGAGTGGATTGGCAACTCTTGGGGGTGGGTCTTTGTTGAATGACTA
GGGTCTTGACGCTAAATATGACAAAGGCAATCCTCTTTTCCCATCCGGGAGATTTCACTCCGGTTTGTACCACCGAGCTGGGTGAGGTCGCTCGTCGTGCCCCTGACTTCCAAAAACGGG
ACGTCAAGCTCATTGGTATTTCTGCCAATGGCCTTGAAGACCACCATGCGTGGGTGAAGGATATCAATGAGTATGGCTCCAAATTCGGTCACACAGACGTCCGATTCCCCATCTCGTATG
TGCTTTAAGCATACTTTCTAGGGCATTAGACTTTCCGTTTCACAGATTGCGGATGGCGATAGGAAAATTTCCACCTTGTATGACATGTTGGATTATCAGGATGCCACCAATAGGGACGCC
AAGGGCCTCCCCTTCACTCTGTGAATTCATCTGTCATCTACAAGTTGACGATTAGCTCATGCATCTATACCAGATCCGTACCGTCTTTGTGATCGATCCGAAGAAGACTATTCGCCTGAT
GATCGCGTACCCCGCTTCAACTGGACGCAACTTTGATGAAATTATCCGGTATGTGCTCTCTTTGTTAGATTTCGTGGAAGCGTGGCTGACTGGACGGATAAAGCGTTGTAGACTGTAAGC
GACTTAACCCATGATTTAGGTCGGGTGCTTAACTGATCCCATAATCAGCCTTGCAACTCGGTGACAAACACCGTATAACCACCCCCGTCAACTGGAATAAAGGTGATGATGTTATTGTAC
ACCCGAGTGTGACCTCCGAAGAGGCCAAGGTCCTGTTCCCCGAGCACACCGTCCACAAGAGGTTAGTCACCGCGTCTCTTCGGACACAATATCATAGAGACTAATGAGCATTCTGTATTA
GCCTTACCTCAGGACCACGCCTCTGAAGGTATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTCCCTTCGCCTAGGTGATACCGCCCCCGACTTTGAAGCTGAAACTACCACAGGAAATATCAAGTTCCATGAGTGGATTGGCAACTCTTGGGCAATCCTCTTTTCCCATCCGGGA
GATTTCACTCCGGTTTGTACCACCGAGCTGGGTGAGGTCGCTCGTCGTGCCCCTGACTTCCAAAAACGGGACGTCAAGCTCATTGGTATTTCTGCCAATGGCCTTGAAGACCACCATGCG
TGGGTGAAGGATATCAATGAGTATGGCTCCAAATTCGGTCACACAGACGTCCGATTCCCCATCATTGCGGATGGCGATAGGAAAATTTCCACCTTGTATGACATGTTGGATTATCAGGAT
GCCACCAATAGGGACGCCAAGGGCCTCCCCTTCACTATCCGTACCGTCTTTGTGATCGATCCGAAGAAGACTATTCGCCTGATGATCGCGTACCCCGCTTCAACTGGACGCAACTTTGAT
GAAATTATCCGGTATGTGCTCTCCTTGCAACTCGGTGACAAACACCGTATAACCACCCCCGTCAACTGGAATAAAGGTGATGATGTTATTGTACACCCGAGTGTGACCTCCGAAGAGGCC
AAGGTCCTGTTCCCCGAGCACACCGTCCACAAGCCTTACCTCAGGACCACGCCTCTGAAGGTATAA

Retrieve as FASTA