Entry information : HcyPrxQ
Entry ID 7611
Creation 2010-09-21 (Christophe Dunand)
Last sequence changes 2012-04-03 (Catherine Mathe (Scipio))
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-12-22 (Achraf Jemmat)
Peroxidase information: HcyPrxQ
Name HcyPrxQ
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: PrxQ001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Hebeloma
Organism Hebeloma cylindrosporum    [TaxId: 76867 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HcyPrxQ
start..stop
S start..stop
LbiPrxQ01 266 2.31e-92 1..158 1..158
PplPrxQ01 223 6.31e-75 1..177 1..172
CcinPrxQ01 214 1.19e-71 3..172 4..173
PcPrxQ 204 8.4e-67 6..167 7..170
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7611' 'complement(join(495972..496206,496272..496393,496456..496553,496609..496659,496720..496849))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 496720..496849 128 N° 2 496609..496659 49 N° 3 496456..496553 96 N° 4 496272..496393 120
N° 5 495972..496206 233  
complement(join(495972..496206,496272..496393,496456..496553,496609..496659,4967 20..496849))


exon

Literature and cross-references HcyPrxQ
Literature Lambilliotte,R., Cooke,R., Samson,D., Fizames,C., Gaymard,F., Plassard,C., Tatry,M.V., Berger,C., Laudie,M., Legeai,F., Karsenty ,E., Delseny,M., Zimmermann,S. and Sentenac,H. Large scale identification of genes in the fungus Hebeloma cylindrosporum paves the way to molecular analyses of ectomycorrhizal symbiosis. New Phytol 164 (3), 505-513 (2004).
DNA ref. JGI genome:   scaffold_9 (496849..495972)
EST ref. GenBank:   CK993011.1 [5' end]  CK995357.1 [5' end]
Protein sequence: HcyPrxQ
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   211
PWM (Da):   %s   22395.53  
PI (pH):   %s   5.09
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPYRSLIGKTAPTITLPNYDGESYTFTPGAKGIPAALFFYPESGSYGCTKEACQFRDAIAEKDNFQPGKVQVIGISPDPVEKQKLFVEKEKLYPVLSDANKEAIKAYGIGKGMLGFVSVA
RVTFIVDKHGII
RDALETTINAGAHSKFVEKWLHRLEEEGSAPTVTTTAETDLPAPVATATSVSTAAAATTTAAEVPIESQLPVETPGLA

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs. 3'end is largely divergente from other orthologs(!!!)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCTACCGATCGCTTATTGGCAAGACCGCACCTACGATCACTCTCCCTAATTACGATGGAGAGTCGTACACATTTACACCTGGCGCGAAAGGGATCCCAGCTGCTCTGTTTTTCTAT
CCAGAATCAG
GTACAATGGAACTTATGAAATAACAAGCTCTCATTTAATTGATTTGCTTCTTCCTTAAAGGCGCTCTTATGGATGTACGAAGGAGGCGTGCCAATTTCGTGATGCCATTG
CAG
GTGAGCTGCAAGATCGAAATAGCAATACATCGTTCGATGCTCATCACTTCGACAGAAAAAAGGACAACTTCCAGCCTGGTAAGGTCCAAGTCATTGGCATTAGCCCCGATCCTGTGG
AGAAACAGAAATTGTTCGTCGAGAAAGAGAAATTAACG
GTATGCACTAGTGAATCATGGTATAGACATGTCTCTGTGAAACTGAATGTTATCACACATAGTATACCCTGTCCTCAGCGAT
GCGAACAAGGAGGCCATAAAAGCTTATGGTATTGGAAAAGGGATGCTGGGTTTTGTCTCGGTTGCTCGCGTTACCTTCATCGTTGACAAGCATGGAATCATCAG
GTGAGTTACTGCTTAC
ATTCGACTATGAATGGAGATTCTCATGCAGATGGTTTTTTGTCCTCTAGGGGGATGCTTTGGAGACTACCATAAATGCTGGCGCGCATTCTAAGTTCGTGGAGAAGTGGTTGCATAGGCT
TGAGGAAGAAGGTTCCGCCCCTACTGTAACAACGACGGCTGAAACCGATCTCCCAGCCCCTGTCGCCACTGCCACCTCTGTCTCCACTGCCGCCGCTGCCACAACAACTGCGGCTGAGGT
TCCCATCGAGTCTCAACTTCCGGTCGAAACTCCAGGGCTAGCTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCTACCGATCGCTTATTGGCAAGACCGCACCTACGATCACTCTCCCTAATTACGATGGAGAGTCGTACACATTTACACCTGGCGCGAAAGGGATCCCAGCTGCTCTGTTTTTCTAT
CCAGAATCAG
GCTCTTATGGATGTACGAAGGAGGCGTGCCAATTTCGTGATGCCATTGCAGAAAAGGACAACTTCCAGCCTGGTAAGGTCCAAGTCATTGGCATTAGCCCCGATCCTGTG
GAGAAACAGAAATTGTTCGTCGAGAAAGAGAAATTAACG
TACCCTGTCCTCAGCGATGCGAACAAGGAGGCCATAAAAGCTTATGGTATTGGAAAAGGGATGCTGGGTTTTGTCTCGGTT
GCTCGCGTTACCTTCATCGTTGACAAGCATGGAATCATCAG
GGATGCTTTGGAGACTACCATAAATGCTGGCGCGCATTCTAAGTTCGTGGAGAAGTGGTTGCATAGGCTTGAGGAAGAA
GGTTCCGCCCCTACTGTAACAACGACGGCTGAAACCGATCTCCCAGCCCCTGTCGCCACTGCCACCTCTGTCTCCACTGCCGCCGCTGCCACAACAACTGCGGCTGAGGTTCCCATCGAG
TCTCAACTTCCGGTCGAAACTCCAGGGCTAGCTTGA

Retrieve as FASTA