Entry information : BfPOX01 ( TPO-like)
Entry ID 7614
Creation 2010-09-22 (Marcel Zamocky)
Last sequence changes 2016-02-09 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-09 (Achraf Jemmat)
Peroxidase information: BfPOX01 ( TPO-like)
Name (synonym) BfPOX01 ( TPO-like)
Class Non mammalian vertebrate peroxidase    [Orthogroup: POX001]
Taxonomy Eukaryota Metazoa Chordata Branchiostomidae Branchiostoma
Organism Branchiostoma floridae (Florida lancelet) (Amphioxus)     [TaxId: 7739 ]
Cellular localisation N/D
Tissue type Testis
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BfPOX01
start..stop
S start..stop
BbePOX01 1111 0 9..644 124..761
CintPOX 694 0 30..786 114..879
HrPOX 673 0 33..745 131..838
SpurPxd01 642 0 18..643 690..1314
Gene structure Fichier Exons


exon

Literature and cross-references BfPOX01 ( TPO-like)
Literature Putnam N.H., et al. (2008) The amphioxus genome and the evolution of the chordate karyotype. Nature 453:1064-1071
Protein ref. UniProtKB:   C3YBC9
DNA ref. GenBank:   GG666497.1 (1172077..1156343)
mRNA ref. GenBank:   XM_002606230
EST ref. GenBank:   BW706337 [5' end]
Protein sequence: BfPOX01 ( TPO-like)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   842 (823)
PWM (Da):   %s   92917.9 (91047.8) Transmb domain:   %s   o754-776i (o735-757i)
PI (pH):   %s   4.55 (4.53) Peptide Signal:   %s   cut: 20 range:20-842
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPTAILVLLASLVVVAHAHSDVLTNLPAISALISQQQLSTIASLSGCARSVTRVNCSSNCLSSKYRTIDGSCNNRENPLWGSSMTPFKRFLPPIYENQWNEPVGWNKTREYNGFTLPSVRHVSNLMTTPTNVADPDYTHMLTQF
GQFLDHDTDLTATAVGRTMFT
PMGTVTCGMTCDNIMPCFPIPIPDDDPRIDNERDACMPFTRSSAVCGTGETSTLFNTVIAREQINQITSFIDASNVYGSKFAFAQSLRDFSTDDGLLRV
QEGEDISSGMASPFQNEAVTSCN
DPNGGDIVPCFLAGDGRVNEVNTLIASHTIWVREHNRLARELKRINPHWDGEQIYQEARKIVGSEMQHITFTEYLPKILGQRGMDQMGEYAGYNPNV
NPSTRNEFATAAFRFGHAAIGAFVRRFD
NYQEAAIGNVALSDAFFSPWRVFRESGIDPVVRGLIGGFAKLVTPTDVLHEELSQNLFKLRNQIALDLASLNTQRGRDHGIPFYNDWRVFCN
LTRA
ASFDDLSGEISNQDVRDTLADVYGDVNNIDLWPAAQLEDHEDGARVGPTFRCMLAEQFKALRDGDRFWFESDGVLTASQRTEIRQVTYARVICDTTGITRLPPDVFRLTDVADMVA
CEDIPGINLQFWEEIP
DEPCGEPAEVEDAYVQKCGANFSDTHIYTCDPGYAMSGAAEIRCLGGRVDNPPPTCSDIDECARGDLNNCQEMCVNSVGSFMCACPDGFMLNDDGVSCSIDTSL
SLGWIIAILFIVLFCLAMCAMVFVLVKG
WHTHHQNQEIQRIKQLNAKPLDRNGVHNQSFISDKHDKKSLTGTSSGDSGVLEDLDSLPGVVS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (16 introns) and 1 EST. Strain="S238N-H82"
DNA
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CDS
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