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Entry information : OcuPxd02
Entry ID 7624
Creation 2010-10-01 (Marcel Zamocky)
Last sequence changes 2016-02-16 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-17 (Christophe Dunand)
Peroxidase information: OcuPxd02
Name OcuPxd02
Class Peroxidasin    [Orthogroup: Pxd001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Leporidae Oryctolagus
Organism Oryctolagus cuniculus (Rabbit)    [TaxId: 9986 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OcuPxd02
start..stop		 S start..stop
PtroPxd01 2386 0 1..1467 1..1463
HsPxd02 2375 0 1..1467 1..1463
HsPxd03 2368 0 1..1467 1..1463
EcabPxd02 2314 0 1..1466 1..1467
Literature and cross-references OcuPxd02
Literature Broad Institute of MIT (unpublished since 2009)
DNA ref. GenBank:   NC_013671.1 (66580299..66061249)
mRNA ref. GenBank:   XM_002710472.1
Cluster/Prediction ref. Genebank:   100350152
Protein sequence: OcuPxd02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1467 (1446)
PWM (Da):   %s   163391.77 (161088.6) Transmb domain:   %s   i9-26o
PI (pH):   %s   6.75 (6.72) Peptide Signal:   %s   cut: 22 range:22-1467
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEPRLLCLAT CFLLAARCLQ GLPCPSRCLC FKSTVRCMHL MLDHIPQAAQ QTTVLDLRFN RIREIPGSAF KKLKNLNTLL LNNNQIRKIS RNAFEGLENL LYLYLYKNEI HALDKQTFKG  LISLEQLYIH FNQIATLQPE TFEDLLKLER LFLHNNKLSK IPAGSFSHLD SLKRLRLDSN ALICDCDLLW LRELLQGYAQ TGQTQAAATC EYPQRLHGQS VASVPVEQFN CERPRITFEP  QDVEVTSGNT VYFTCRAEGN PKPKIIWIHN NHSLDLEYDP RLNMFDDGTL MIRNARESDQ GVYQCMARNS AGEAHTHNAV LRYSSLPAKP NFVIQPRDTE VLIGTSTTLE CMATGQPHPH  VTWTRGNGQE LDESRHVVTS SGLHLQNISL WDHGPFTCHA SNNQGSIQAT ASIIVQAPPQ FTIIPKDQVV LEDHAVEFPC EAEGSPRPVI VWTKAGRQLS LEGRHTVLSS GTLRIDHAAQ  HDQGQYECQA VSPLGVRKVS VQLTVKPKDL PVFTQLPQDM SIEVGRSINI SCHAHGEPQP IITWSKAGVQ ITESGKFHVD SGGTLTIYDA GQADQGRYEC VARNSFGLVV ASMFLGVTAT  QGRQAGDDFV ESSILDAVQR VDSAINSTRR HLFAQKPHTP SDLLALFRYP RDPFTVETAR AGEIFEQTLQ LIQERVKQGL TVDLEGREFH YNDLVSSRYL SLIANLSGCT AHRHQPNCSD  MCFHLKYRKA DGTCNNLRQP AWGAAHTAFV RLLQPAYENG LGSPRGAGRL PGSGRPPLPL PRLVSTELAG AATVRPDGSY THMLMQWGQF LDHDLDHTVP ALSTARFSDG QPCSSVCTDD  PPCFPIAFPH DDPRAGSAAC MFFARSSPVC GSGMTSLMMN SVYAREQINQ LTAYIDASNV YGSSERESQL LRDPSTPEGL LRTGVRWSAS GKHLLPFATG PPTECTVGDQ DSASPCFLAG  DHRANEQLAL TAMHTLWVRE HNRVATELSA LNPHWDGDTV YQEARKVVGA ELQHITYQQW LPKILGEPGM VLLGEYRGYD PNVNAGIFNA FATAAFRFGH TLVNPILYRL NDTFGEIPQG  HLPLHKAFFA PSRILDEGGI DPLLRGLFGV AAKAREPSRL LSLELTERLF AAAHAVALDL AATNVQRGRD HGIPPYGDFR VFCNLTSVES FEDLQHEIKN PEIRRKLEKL YSTPGDIDLW  PALMVEDLIP GTRVGPTLMC LLVIQFQRLR DGDRFWYENP GVFTPAQLTQ LKQVSLARVL CDNGDDIQQV QADVFVRAEY PQGYLSCSDI PKMDLRVWQD CCADCRSRGH LRTSTPESRK  RRSTQYSYPG KKHMDLSDIM IRQQDNLYVD EETRNVTLAG KTDFARDFSN FAVDIQKTIT VLRDQINKLE ARLRQAGCTD DKGIQRKDQE RWMREDCISC TCESGQVTCV VESCPPTPCS 
SPQLETGTCC PVCRRKQGVP TDAPERR 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, 22 introns). No EST.
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