The peroxidases and oxidases database
Entry information : VvPrx06 (GSVIVG01003417001)
Entry ID 763
Creation 2007-04-02 (Christophe Dunand)
Last sequence changes 2014-02-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-04-10 (Christophe Dunand)
Peroxidase information: VvPrx06 (GSVIVG01003417001)
Name (synonym) VvPrx06 (GSVIVG01003417001)
Class Class III peroxidase    [Orthogroup: Prx020]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue types Berries
Fruits
Inflorescences
Mixed tissues
Pedicel
Inducer Abiotic stress
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx06
start..stop		 S start..stop
CsPrx06 545 0 1..326 1..326
CclPrx39 542 0 1..326 1..326
TcPrx17 537 0 12..322 13..323
CroPrx50 536 0 15..325 18..328
Literature and cross-references VvPrx06 (GSVIVG01003417001)
Literature Cushman,J.C. An expressed sequence tag database for abiotic stressed berries of Vitis vinifera var. Chardonnay. Unpublished (2002)
DNA ref. GenBank:   AM426597 (8027..6611)   CAAP02003708.1 (27374..28787) [Other strain]
Cluster/Prediction ref. UniGene:   Vvi.381
Protein sequence: VvPrx06 (GSVIVG01003417001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (309)
PWM (Da):   %s   36193.19 (34452.2)  
PI (pH):   %s   6.74 (6.75) Peptide Signal:   %s   cut: 18 range:18-326
Sequence 0
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MSLLVLLCIL NIATATAAHL RPGFYSESCP EAELIVREVM KKAMIKEPRS GASVMRLQFH DCFVNGCDAS LLLDDTPNML GEKLALSNIN SLRSFEVIDQ VKEALEKSCP ETVSCADIII  MASRDAVALS GGPDWEVKLG RKDSLTASQE DSNNIMPSPR SNASFLVDLF NQFNLSVKDL VALSGSHSIG QGRCFSIMFR LYNQSGTGRP DPAIEPKYRN RLNKLCPLNV DQNVTGDLDA 
TPEIFDNQYF KDLVSGRGFL NSDETLFTYP RTRKFVQVYS NDQIKFFKDF AKAMIKMGDL QSGRPGEIRR NCRMVNSRSV DTLLES 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, introns 1 and 2) and 10 ESTs. Incorrect prediction from Phytozome (extra intron in 3'). Cultivar="Pinot Noir", "Cabernet Sauvignon", "Shiraz" and "PN40024".
Promoter►
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ATTAATTGAT CGAGGCATGA AGCATGGCTC GTGGCTGACA TGTGTGAGCA GTTATCAAAG GGCCTAATGC ATGACGAAGT GGCCTCACTT ATCAACAGAT ATGAGGGTGA CTGGTTATTG  CATGGACAGA TGGTTTCCTA TCCGTGGGTA ACATGGTGTT GTGCATGAAG AGGTGCATAG GCTAGTACTT GCACCACCTG AACCAAGACA AAAGGATATG AGACACATGA GAAGAAGCTA  GCTAGAAGCG TGAAGAAACT GCCAAGACCG ATGGCAAAGC AAGGGTCGAG TCTCCTAAAC GTGGATAGTT AATGAGGGTA ATTGGTTGCC TATAAATATC CTATTCTATC ACGTATTTGG  CAAAGAGTCT CAGCATAAGT TGATGTTTGG TTTGTAAGCC TCGATCTGTT TTGTGAGCAA TAATACAAGT TGAAAAGTGA CTTCCCATAC GTTCTTTGTA CTACCTAATG TTGCTTGTGC  TAGTTGTGTG CGGGTTTGCA CTGATGTGAT TGTGGGTCGA GTCTTAGCAC TATTATAAGG AAAAAAACAC TTGTGGCAAG GAATTTTTGT GACATGACCA TGATGGCCAT ATTTGGATGA  AGTCCTCTCC CTCAAACGCT GGAGGCTCCG TTAAATGGGG AGGAATTGCA TATGCATCCG TCGCCTGTCT TGGATGGATA CAGCTGCGTC TTGATCTAAG TCCGGCCCAA GCATCGACTT  ACCAGGCCGT GCATCTTCTG ATGCCACCCA AAATTAGCAT CTAAGATCAG ATAAAGAGCA TACTTTGGAA AAGGACCTAT GCTGTTAGGG ATTAGACGTG AGTATCATGG AGCTTTTCCT  CACAACCACA AGTGGGTCAA TTTTGTATTT AACCATTGGA TGCTTGACAT GTGTAACCCA TTCACCTCAG GATAAGGGAA TCCGAGCCCC TCAAACCACA TTTTTCTCCC CAAGAAAACG  ATCCGCCAAA GCCTTTTGGC TGTTTATTTG AAGTTTCAAC GACCAATTTG AGCGTCAAAA TCCGTAGGTG TTGCTTCTCA ACTTGGGGCA AGCCTGCGTA CGGGGAAGCT TCCTCTGCCA  CATATTCAAT CATATGTCAA CCTGCACAAC AACCCAGCTT TGAACCATGA GGCTTCATGG TCTCCAGTTC TGTAAGAAAA AAAGTAGAAT GCGTCACATG CTGATTGGAG ACCGACCTAT  ATCTGCTCCT CCAACATTTG TATACGTGAT CTCCTTTTCC TTTTCTCACA AACAACCCAT TTGACTTAAA CGCGCATTGA TATTTTGCCT CTAAGAAAAA AATCAACCAG GGCATTTTTG  TGGTATGTTC TAATTTGTTA CGATAACTGG ACCACCAGGG TTGGTGAGAC TATTTATTAG TATTTGACCC CATCTCACAT AAAACCTTAT CACCATGTTA CCATTTTAAC ATCAAAGTTG  GGACAATTGA GTGGAGGAAA AAACAAAAAA TGTACATCAT ATGTGAAAAC CGCTAACTAG GGAACATTCA ATATTTCAAA ATTAAGAGAA AGTAGAAACA TGGGCATCTT CTTATCTTTA  TCTTTTAAAC CCCTTTTCAT TATGTCTTCT TATCCCTTAG AACCTACTCA CGCAGATGGG GGGTGTCATC CACGCTGTGA TCCTAATTCA TGTAGGGATA GTGGGACCGA TGGATTGAAA  ATATAGGGAG AGCAACAGCG GGTGATATGA GGAAATGATT TCAGAGCATC GTGGGTGTCG CAAAGGTTGG CGCAGTGGAT CATCACTAAC AAACTCCACA GACATGACCT ATACCTTACT  AAATCACTCA CACTTGGAGC CAATTGGCGT CTGTTGCCTC CAAATGCCCC AACAAAACCC TGTAATTTGC TGACACCCAT GGAAAAAAAA CGATTCTCTT CCTCTGCCCT TCCCTTACAT 
ATATCCAAAA CCAGATAAAA AAAAACCCCA TCGAGCACGC TGCATTAGAC CATTTCATAT CCATTACTAG TACCCAGAAA 

Retrieve as FASTA  
DNA ►
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ATGTCTCTTC TCGTTCTTCT CTGCATCCTC AACATAGCAA CCGCCACTGC AGCCCATCTC CGGCCTGCGT TCTACTCTGA ATCTTGCCCC GAAGCGGAGT TAATAGTGAG GGAAGTGATG  AAGAAGGCCA TGATTAAAGA ACCCAGGAGT GGGGCATCGG TCATGCGACT ACAATTCCAT GACTGCTTTG TTAATGTAAT TCTACAAACC AGAACTTAAT TTTTCTTTTC TCAAATCTTC  TAACCTGATA TGGGTGATTT TGATGATCTT TTCAGGGGTG TGATGCTTCT TTGTTACTAG ATGATACACC AAACATGTTA GGGGAAAAGC TGGCTTTATC GAATATAAAC TCGTTAAGAT  CCTTCGAAGT TATCGACCAA GTGAAGGAAG CATTGGAGAA GTCATGTCCA GAGACGGTTT CTTGCGCAGA TATCATAATC ATGGCCTCTA GAGATGCGGT GGCACTGGTA AACCTCTTGA  CTTAATCCTG CTATTTTCAT CTCCTTTATA CAAGAACTTG CCATGGGGCA GAGTGAATTA ATTGAAGCTC TAGGAACTGA GACATGGGCA TAAGATGTAT TCCCAAAAAG GTCCTTACTT  TCAAAGCCCC CAAGTACCAA TCCATGCCTT CGGTCATGGT AATTGCTAAC CTTTTTCATG TCTGTGAAGG GTACTAGACA GGAGCAGGTG AGCAGTTACT GAGTTAGAAT GAGGGAAAAG  CCGTTTTGCA AAATGATATA TAGGCTATAA TTTCTATTAA GCCTTTGGCA ATTGGCCTGA AGTTATTATA AGCAATCTCA TAAAATGATT TTGTTGTAAA CAGAGCGGAG GACCCGACTG  GGAAGTGAAG CTAGGAAGAA AAGACAGCTT AACGGCGAGC CAAGAAGACT CGAACAACAT CATGCCAAGC CCAAGATCGA ACGCAGTTTC CTCGTAGATC TCTTCAACCA ATTCAATCTA  TCTGTCAAGG ATCTTGTAGC CCTTTCTGGT TCACACTCCA TCGGACAGGG CAGGTGCTTT TCCATCATGT TTCGACTCTA TAACCAATCA GGTACGGGCC GCCCTGACCC TGCCATCGAA  CCGAAGTATA GAAACAGGCT GAACAAGCTT TGCCCGCTCA ACGTAGACCA GAACGTGACA GGAGACCTCG ATGCAACACC CGAAATATTT GATAACCAAT ACTTCAAGGA CTTGGTTTCA  GGGAGAGGGT TCTTGAATTC AGATGAGACA CTATTCACCT ATCCGCGGAC CAGAAAATTT GTGCAGGTTT ATAGTAATGA CCAAATTAAA TTTTTCAAGG ATTTTGCCAA GGCGATGATA 
AAGATGGGAG ACTTGCAGTC TGGGCGGCCA GGAGAGATCA GAAGAAACTG TAGAATGGTT AACAGCCGGT CAGTCGACAC ACTCCTGGAA TCTTAA 

Retrieve as FASTA  
CDS►
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ATGTCTCTTC TCGTTCTTCT CTGCATCCTC AACATAGCAA CCGCCACTGC AGCCCATCTC CGGCCTGGGT TCTACTCTGA ATCTTGCCCC GAAGCAGAGT TAATAGTGAG GGAAGTGATG  AAGAAGGCCA TGATTAAAGA ACCCAGGAGT GGGGCATCGG TCATGCGACT ACAATTCCAT GACTGCTTTG TTAATGGGTG TGATGCTTCT TTGTTACTAG ATGATACACC AAACATGTTA  GGGGAAAAGC TGGCTTTATC GAATATAAAC TCGTTAAGAT CCTTCGAAGT TATCGACCAA GTGAAGGAAG CATTGGAGAA GTCATGTCCA GAGACGGTTT CTTGCGCAGA TATCATAATC  ATGGCCTCTA GAGATGCGGT GGCACTGAGC GGAGGACCCG ACTGGGAAGT GAAGCTAGGA AGAAAAGACA GCTTAACGGC GAGCCAAGAA GACTCGAACA ACATCATGCC AAGCCCAAGA  TCGAACGCCA GTTTCCTCGT AGATCTCTTC AACCAATTCA ATCTATCTGT CAAGGATCTT GTAGCCCTTT CTGGTTCACA CTCCATCGGA CAGGGCAGGT GCTTTTCCAT CATGTTTCGA  CTCTATAACC AATCAGGTAC GGGCCGCCCT GACCCTGCCA TCGAACCGAA GTATAGAAAC AGGCTGAACA AGCTTTGCCC GCTCAACGTA GACCAGAACG TGACAGGAGA CCTCGATGCA  ACACCCGAAA TATTTGATAA CCAATACTTC AAGGACTTGG TTTCAGGGAG AGGGTTCTTG AATTCAGATG AGACACTATT CACCTATCCG CGGACCAGAA AATTTGTGCA GGTTTATAGT  AATGACCAAA TTAAATTTTT CAAGGATTTT GCCAAGGCGA TGATAAAGAT GGGAGACTTG CAGTCTGGGC GGCCAGGAGA GATCAGAAGA AACTGTAGAA TGGTTAACAG CCGGTCAGTC 
GACACACTCC TGGAATCTTA A 

Retrieve as FASTA