Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
326 (309) |
PWM (Da): |
36193.19 (34452.2) |
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PI (pH):
| 6.74 (6.75) |
Peptide Signal:
| cut: 18 range:18-326 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSLLVLLCIL NIATATAAHL RPGFYSESCP EAELIVREVM KKAMIKEPRS GASVMRLQFH DCFVNGCDAS LLLDDTPNML GEKLALSNIN SLRSFEVIDQ VKEALEKSCP ETVSCADIII
MASRDAVALS GGPDWEVKLG RKDSLTASQE DSNNIMPSPR SNASFLVDLF NQFNLSVKDL VALSGSHSIG QGRCFSIMFR LYNQSGTGRP DPAIEPKYRN RLNKLCPLNV DQNVTGDLDA
TPEIFDNQYF KDLVSGRGFL NSDETLFTYP RTRKFVQVYS NDQIKFFKDF AKAMIKMGDL QSGRPGEIRR NCRMVNSRSV DTLLES
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 7, introns 1 and 2) and 10 ESTs. Incorrect prediction from Phytozome (extra intron in 3'). Cultivar="Pinot Noir", "Cabernet Sauvignon", "Shiraz" and "PN40024".
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Promoter►
Send to BLAST
Send to cis Analysis
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTCTTC TCGTTCTTCT CTGCATCCTC AACATAGCAA CCGCCACTGC AGCCCATCTC CGGCCTGCGT TCTACTCTGA ATCTTGCCCC GAAGCGGAGT TAATAGTGAG GGAAGTGATG
AAGAAGGCCA TGATTAAAGA ACCCAGGAGT GGGGCATCGG TCATGCGACT ACAATTCCAT GACTGCTTTG TTAATGTAAT TCTACAAACC AGAACTTAAT TTTTCTTTTC TCAAATCTTC
TAACCTGATA TGGGTGATTT TGATGATCTT TTCAGGGGTG TGATGCTTCT TTGTTACTAG ATGATACACC AAACATGTTA GGGGAAAAGC TGGCTTTATC GAATATAAAC TCGTTAAGAT
CCTTCGAAGT TATCGACCAA GTGAAGGAAG CATTGGAGAA GTCATGTCCA GAGACGGTTT CTTGCGCAGA TATCATAATC ATGGCCTCTA GAGATGCGGT GGCACTGGTA AACCTCTTGA
CTTAATCCTG CTATTTTCAT CTCCTTTATA CAAGAACTTG CCATGGGGCA GAGTGAATTA ATTGAAGCTC TAGGAACTGA GACATGGGCA TAAGATGTAT TCCCAAAAAG GTCCTTACTT
TCAAAGCCCC CAAGTACCAA TCCATGCCTT CGGTCATGGT AATTGCTAAC CTTTTTCATG TCTGTGAAGG GTACTAGACA GGAGCAGGTG AGCAGTTACT GAGTTAGAAT GAGGGAAAAG
CCGTTTTGCA AAATGATATA TAGGCTATAA TTTCTATTAA GCCTTTGGCA ATTGGCCTGA AGTTATTATA AGCAATCTCA TAAAATGATT TTGTTGTAAA CAGAGCGGAG GACCCGACTG
GGAAGTGAAG CTAGGAAGAA AAGACAGCTT AACGGCGAGC CAAGAAGACT CGAACAACAT CATGCCAAGC CCAAGATCGA ACGCAGTTTC CTCGTAGATC TCTTCAACCA ATTCAATCTA
TCTGTCAAGG ATCTTGTAGC CCTTTCTGGT TCACACTCCA TCGGACAGGG CAGGTGCTTT TCCATCATGT TTCGACTCTA TAACCAATCA GGTACGGGCC GCCCTGACCC TGCCATCGAA
CCGAAGTATA GAAACAGGCT GAACAAGCTT TGCCCGCTCA ACGTAGACCA GAACGTGACA GGAGACCTCG ATGCAACACC CGAAATATTT GATAACCAAT ACTTCAAGGA CTTGGTTTCA
GGGAGAGGGT TCTTGAATTC AGATGAGACA CTATTCACCT ATCCGCGGAC CAGAAAATTT GTGCAGGTTT ATAGTAATGA CCAAATTAAA TTTTTCAAGG ATTTTGCCAA GGCGATGATA
AAGATGGGAG ACTTGCAGTC TGGGCGGCCA GGAGAGATCA GAAGAAACTG TAGAATGGTT AACAGCCGGT CAGTCGACAC ACTCCTGGAA TCTTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTCTTC TCGTTCTTCT CTGCATCCTC AACATAGCAA CCGCCACTGC AGCCCATCTC CGGCCTGGGT TCTACTCTGA ATCTTGCCCC GAAGCAGAGT TAATAGTGAG GGAAGTGATG
AAGAAGGCCA TGATTAAAGA ACCCAGGAGT GGGGCATCGG TCATGCGACT ACAATTCCAT GACTGCTTTG TTAATGGGTG TGATGCTTCT TTGTTACTAG ATGATACACC AAACATGTTA
GGGGAAAAGC TGGCTTTATC GAATATAAAC TCGTTAAGAT CCTTCGAAGT TATCGACCAA GTGAAGGAAG CATTGGAGAA GTCATGTCCA GAGACGGTTT CTTGCGCAGA TATCATAATC
ATGGCCTCTA GAGATGCGGT GGCACTGAGC GGAGGACCCG ACTGGGAAGT GAAGCTAGGA AGAAAAGACA GCTTAACGGC GAGCCAAGAA GACTCGAACA ACATCATGCC AAGCCCAAGA
TCGAACGCCA GTTTCCTCGT AGATCTCTTC AACCAATTCA ATCTATCTGT CAAGGATCTT GTAGCCCTTT CTGGTTCACA CTCCATCGGA CAGGGCAGGT GCTTTTCCAT CATGTTTCGA
CTCTATAACC AATCAGGTAC GGGCCGCCCT GACCCTGCCA TCGAACCGAA GTATAGAAAC AGGCTGAACA AGCTTTGCCC GCTCAACGTA GACCAGAACG TGACAGGAGA CCTCGATGCA
ACACCCGAAA TATTTGATAA CCAATACTTC AAGGACTTGG TTTCAGGGAG AGGGTTCTTG AATTCAGATG AGACACTATT CACCTATCCG CGGACCAGAA AATTTGTGCA GGTTTATAGT
AATGACCAAA TTAAATTTTT CAAGGATTTT GCCAAGGCGA TGATAAAGAT GGGAGACTTG CAGTCTGGGC GGCCAGGAGA GATCAGAAGA AACTGTAGAA TGGTTAACAG CCGGTCAGTC
GACACACTCC TGGAATCTTA A
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Retrieve as FASTA
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