Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
198 |
| PWM (Da): |
21764.2 |
|
| PI (pH):
| 5.36 |
|
Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASGNARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGVCPAGWKPGSDTIKPNVDDSKEYFSKHN |
Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (chromo 19, 4 introns)
The last exon is on another contig : not the true place. PArt of the intron 4 is missing. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCTCCGGTAACGCGCGCATCGGAAAGCCAGCCCCTGACTTCAAGGCCACAGCGGTGGTTGATGGCGCCTTCAAAGAGGTGAAGCTGTCGGACTACAAAGGTGAGCGCCGCCCGGAT
GGGGCCCAGGTAGAAGCGGGGCCGTGCATGAGAGAAGCTGGGCCCTAACTCCTCTGTGTCCCTCCTCCCCAGGGAAGTACGTGGTCCTCTTTTTCTACCCTCTGGACTTCACTTTTGTGT
GCCCCACCGAGATCATCGCGTTCAGCAACCGTGCCGAGGACTTCCGCAAACTGGGCTGTGAAGTGCTGGGCGTCTCGGTGGACTCTCAGTTCACCCACCTGGCTTGGTATGAGCAGGGGC
CAAAGAGGGAGGTTGCAGCTAAGCTCACACCCTCGGGTCCCAGCTGTGTGGCTTCGTGGCCATTGCTCAACCTCTGGAACCTGCGTTTCCCCATCGTGAAAATAATGGAAACATTGCCGC
CCAAGTCTTTAAGGATGATGACAGTAATTAGCATTTGACAACTAGTTGCCTGGCATATAGAGTTGCAGATGCAACTCAGATGCAACTCTACTCTATCTACTTAGTTCCCAGGAGGGAGGC
TGTGCTGCCCTATTTCATAAAGATGGAAACTCCAGTTCACCGAAGTGAAGGGCTGTACCCCATGACACAGCTAGAGGAGGATGGGGACTCTTAACACGGGCTCTCTGCTGGGTGATGCTG
CAAGTTACAAGCACATGTGAAGCCACTTAGCTGGAGCTGTGCCTCTCAAACTCAGTCTTCCCAGCTGTGGGGATAGAGTCCTTGCACCCAACCCAGGGTGGGGTGGGTGAGGCTCCCAGC
AGCCTACTCTAAAGCCCCTTATCTCCGGCCTCCAGTGCTTATCACATTGGGCCCACAGGGTGAGGACCCTGCTGTGCCAGGCATCTTGAGGCCCCAACTCTGTCTCCCCTACTCCCAGGA
TCAACACCCCCCGGAAAGAGGGAGGCTTGGGCCCCCTGAACATCCCCCTGCTTGCTGACGTGACCAGACGCTTGTCTGAGGATTACGGCGTGCTGAAAACAGATGAGGGCATTGCCTACA
GGTACTGTGGGACCCTCAGCCCGGCTCAGGGAGCGCCCTGCCCCCCTTTCCTGTGATGCTGGGACCACTCCTGTACAATGTCTTCTCTGCCCCCAGCCCTGTGGCTAGCAGCGGGTGGTT
GGTAGTCCCTTCCTTGTCTCTGGCAGTGGGAGCTACCAGCTCCTCACTGGGAACCCTGATGTCTTCAGGGGCCTCTTTATCATCGATGGCAAGGGTGTCCTTCGCCAGATCACTGTTAAT
GATTTGCCTGTGGGACGCTCCGTGGATGAGGCTCTGCGGCTGGTCCAGGCCTTCCAGTACACAGACGAGCATGGGGAAGGTGAGCAGATACACACATGACACATGGGTACATACTGAGCA
CCTCCGTCACTCATGCAAACATTCACTGCCTGTCCTCTTACCTGTCCAGATGGGTGTTAGGGCCCCCAAAGAAGATTCAGCTCAGGGCTTTGTCTGCAGGATGTTTCTAATGTGGTAGGA
GACAAATAACGCCTGACATTCAACCAAGGTGGACAAAGGGGCCGGGCTCAGTGGCTCATGGTTGTAATGCCAGCACTTTGGGAAGCTGTGGCAGGTGGATCACCTGAGGTCAGGAGTTCG
AGACCAGCCTGACCAACATGGTGAAACCCCGTCTCCACTAAGAACACAAAAAATTAGCTGGGCGTGGTGGTGCACACTTGTAATCCCAGCTACTTGAGAGACTGAGGCAGGAGTTCGCTT
GAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACCGTTGTACTCCAGCTTGGGCAACAGAGCAAAACTCAGTCTCAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAAAGAAAGAAAAAAGAAGAAAAGAAAAAGAGAAAATACTGAACTTGGCTAGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGA
GGCCAAGACAGGCAGATGACTTGAGGTCAGGAGTTCGAGACAAGCGTGACTAACATGGTCTCTACCAAAAATACAAAAATTAGCCAGGCGTGGTGGTGCACCCCTGTAATTCCAGCTACT
TGGGAGTCTGGGGCATGAGAATCGCTTGAACCCAGGAGGGAGAGGTTGCATGAGCTCAGATCATGCTACTGTACTTCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAAAAAAGAAAAA
AAAAATACTGAACTGGGCTTGGAGGGCTTATCTTAATATCCACATTCCTGGGCCTGGACCACTTGCTTCCAGCATTTTCTTCTGCAACACAGGCCCTTGCTTTGCTTCACCTTGAACCTG
GGGCTGTAGCCTTCATGTGCATCCTTGTGTCTTCCCACAGTTTGTCCCGCTGGCTGGAAGCCTGGCAGTGACACGATTAAGCCCAACGTGGATGACAGCAAGGAATATTTCTCCAAACAC
AATTAG |
Retrieve as FASTA
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|
CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCTCCGGTAACGCGCGCATCGGAAAGCCAGCCCCTGACTTCAAGGCCACAGCGGTGGTTGATGGCGCCTTCAAAGAGGTGAAGCTGTCGGACTACAAAGGGAAGTACGTGGTCCTC
TTTTTCTACCCTCTGGACTTCACTTTTGTGTGCCCCACCGAGATCATCGCGTTCAGCAACCGTGCCGAGGACTTCCGCAAACTGGGCTGTGAAGTGCTGGGCGTCTCGGTGGACTCTCAG
TTCACCCACCTGGCTTGGATCAACACCCCCCGGAAAGAGGGAGGCTTGGGCCCCCTGAACATCCCCCTGCTTGCTGACGTGACCAGACGCTTGTCTGAGGATTACGGCGTGCTGAAAACA
GATGAGGGCATTGCCTACAGGGGCCTCTTTATCATCGATGGCAAGGGTGTCCTTCGCCAGATCACTGTTAATGATTTGCCTGTGGGACGCTCCGTGGATGAGGCTCTGCGGCTGGTCCAG
GCCTTCCAGTACACAGACGAGCATGGGGAAGTTTGTCCCGCTGGCTGGAAGCCTGGCAGTGACACGATTAAGCCCAACGTGGATGACAGCAAGGAATATTTCTCCAAACACAATTAG |
Retrieve as FASTA
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