Entry information : PhucoPxd01
Entry ID 7677
Creation 2010-11-02 (Marcel Zamocky)
Last sequence changes 2016-02-16 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-17 (Christophe Dunand)
Peroxidase information: PhucoPxd01
Name PhucoPxd01
Class Peroxidasin    [Orthogroup: Pxd001]
Taxonomy Fungi/Metazoa; Metazoa; Bilateria; Ecdysozoa
Organism Pediculus humanus corporis (human body louse)    [TaxId: 121224 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PhucoPxd01
start..stop
S start..stop
TcasPxd01 1365 0 1..1179 216..1384
AgaPxd01 1355 0 1..1258 207..1496
AaePxd 1347 0 4..1263 203..1518
AaePxd 62 0.000000000841 275..379 189..297
CquPxd01 1343 0 1..1266 85..1339
Gene structure Fichier Exons


exon

Literature and cross-references PhucoPxd01
Literature Kirkness,E., Hannick,L., Hass,B., Bruggner,R., Lawson,D., Bidwell,S., Joardar,V., Caler,E., Walenz,B., Inman,J., Schobel,S., Galinsky,K., Amedeo,P. and Strausberg R. Annotation of Pediculus humanus corporis strain USDA. (Unpublished since 2008)
Protein ref. GenBank:   XP_002431634.1
DNA ref. GenBank:   DS235854.1 (514698..508001)
mRNA ref. GenBank:   XM_002431589.1
Protein sequence: PhucoPxd01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1266 (297)
PWM (Da):   %s   142301.68 (30896.3)  
PI (pH):   %s   7.07 (7.98) Peptide Signal:   %s   cut: 29 range:29-325
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEGRELATMSEDDFHCRKPEIVEEPRDVEVSFGGSASFHCKVDGD
PAPEVIWLRN
SNEINANDGRHSILKDGTLMIESTLDEDLGTYECVAKSPLGQIKSKQVRMDKVRTTEGKPHFERTPLDWSANIGDTVQLVCSANGDPRPHISWYFGESHLSNSH
KY
IEDNGVLIIFNAQPQDAGIYRCTAANSLGVISSVSRLRVNVAPTFSTHPENLTLKSGEMAELVCAADGEPVPSISWYKGGRLLATGGRTYVLGQKLRIEHVKESDSGLYVCRADNRAG
QAETTARILVKDYRERLPPKFIHTPYNLDVPAGSTIEIPCKADGEPAPVMVWRKDGNVISESKGHYRLSSHGSLYIHSVSFQDAGTYECSAVNDFGKVVANGVLKVK
GKPQPASPGDKFV
QKAFEEASRDIDHAVDNTLKTFVHRPRNGPPLSAGELMRLVRFPNAAARQVARAAEVYERTLYLIRKHVESGMKVKPEK
DFSYKDILSPEKLTIIANLSGCMIHRPAINCSDMCFHNKYR
TIDGTCNNMKHPMWGASLTGFDRILSPVYEDGFSMPV
GWTKSIKYHGFSKPSARLISTRLIRTDEITPDDHVTHMLMQWGQFLDHDLDHAIPSVSSESWGGINCKKSCDYAAPCYPIEVP
PNDPRVTNRRCIDVVRSSAICGSGQTSVLWADVQPREQINQLTAFIDAS
VYGFSTDVANILRNFTNDYGRLREGISYPNGKPLLPFAENHPNDCRRDPGESEIECFIAGDIRSNEQIGLL
AMHTIWFREHNRIASELRHLNTHWDGDTIYYEAR
IVGAEMQHITYNHWLPLVLGEKGMEMLGKYKSYDPNISPGISNVFATAALRFGHSLINPVLERLNSSFQPIPEGHLLLQKAFFSPW
RLVDEGGVDPLMRGLFTAPAKLKTPTQNLNSELTEHLFEFAHAVALDLAAINIQRGRDHALPEYNAFRKYCNLTVAETFDDLRGEISSQSVRNELEALYGHP
GNIDVWVGGILEDQIDGA
KVGPTFRCLLVEQFKRLRDGD
RFWYENNGVFKPEQLTEIKQSSLARVLCDNGDDIRDVTRNVFVLPRKQGGYLPCAKIPQIDLRFWTECSDCQGPRIFDGISNSISRTRRSSSGSSMVKK
RQTNSQMNQLNELNRFYN
VQMDDEVNEDRIEGMETVLEEFQKTLKQIKRKMRKLSYQCQMNLNKKNSTQSHGSHHHNQCNDNGHKRINGEHWSKDACTQCVCQEKQITCTKILCPKMICS
KPETKPDECCPVCPKDDNKNQ*

Retrieve as FASTA  
Remarks Complete from genomic (18 introns). No EST found. Strain="USDA". In GenBank annotated as "thyroid peroxidase precursor".
DNA
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CDS
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