Entry information : TguPxd01
Entry ID 7678
Creation 2010-11-02 (Marcel Zamocky)
Last sequence changes 2016-02-09 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-09 (Achraf Jemmat)
Peroxidase information: TguPxd01
Name TguPxd01
Class Peroxidasin    [Orthogroup: Pxd001]
Taxonomy Eukaryota Metazoa Chordata Aves Estrildidae Taeniopygia
Organism Taeniopygia guttata (Zebra Finch)    [TaxId: 59729 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TguPxd01
start..stop
S start..stop
GgaPxd01 2836 0 1..1431 49..1447
MdoPxd01 2715 0 1..1431 196..1627
RnoPxd01 2630 0 1..1431 47..1475
MmPxd01 2624 0 1..1431 47..1475
Gene structure Fichier Exons


exon

Literature and cross-references TguPxd01
DNA ref. GenBank:   NW_002198514 (16256978..16172447)
mRNA ref. GenBank:   XM_002195455.1
Cluster/Prediction ref. Genebank:   100230769
Protein sequence: TguPxd01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1431 (1353)
PWM (Da):   %s   161445.53 (151301.8)  
PI (pH):   %s   6.59 (7.19) Peptide Signal:   %s   cut: 27 range:27-1379
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHLMLESVPAVSPQTTILDLRFNRIKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLEPESFTHLPKLERLFLHNNR
IAHLIPGTFSHLESMKRLRLDSNALHCDCEILWLAELLKTYAESGNAQAAATCEYPRRIQGRSVATITPEELNCERPRITSEPQDVDVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMK
EDSRLNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLRYFESPARPSFVIHPQNTEVLVGESVTLECSATGHPQPRITWTKGDRTPLPNDPRVTITPSGGLYIQNVKQEDSGE
YTCFASNTIDNIHATAYIIVQALPQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGGGQLSVDRRHLVLSSGTLRISRVALHDQGQYECQAVNIIGSQRIVVYLTVQPRVTPVFAS
VPSDMTVEVGTNVQIPCNAQGEPEPVITWNKDGVQVTESGKFHVSPEGFLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVNVPNVSRNGDPFVQTSIVEAIATVDRAINSTRTHLFDS
RPRSPNDLLALFRYPRDPYTVEQARAGEIFERTLQLIQEHVQDGLMVDLNGTSYHYNDLVSPQYLNLIANLSGCTAHRRVNNCSDMCFHQKYRTHDGTCNNLQHPMWGASLTAFERLLKS
VYENGFNLPRGIEPRRLSNGYPLPMPRLVSTTLIGTETVTPDEQYTHMLMQWGQFLDHDLDLTVAALSEARFSDGQHCSSVCTNDPPCFSIMIPPNDPRVRNGARCMFFVRSSPVCGSGM
TSLLMNSVYPREQINQLTSYIDASNVYGSSDHEALEIRDLASQRGLLRQGIVQRSGKPLLPFATGPPTECMRDENESPIPCFLAGDQRSNEQLGLTSIHTLWFREHNRIATELLKLNPHW
DGDTIYHETRKIVGAEMQHITFSHWLPKIFGEVGMKMLGEYKGYDPSVNSGITNEFATAAFRFGHTLINPFLYRLDENFEPIPQGHLPLHKAFFSPFRIVNEGGIDPLLRGFFGVAGKMR
VPSQLLNTELTERLFSMARTVALDLAAMNIQRGRDHGIPPYHDFRVYCNLSSAQTFEDLKNEIKNPEIREKLSRLYGSPLNIDLFPALMVEDLVPGSRLGPTLMCLLSTQFRRIRDGDRL
WYENPGVFTPAQLTQIKQTSLARVLCDNGDNITRVQHDVFKVAEFPHGYSSCEDIPKLDLRMWQDCCEDCRTRGQFNAFSYHFRGRRSLDYSFQEDKPLKKMKMSKSVSSVKQSKYFRNA
TSTSNEKRNVPAVNDFKEFVLEMQKTISSLRNQIKKLESRLSNSDCTDEEGKSYSSNETWKRDPCTVCECKAGQITCFVESCPPADCEAPVKGKGDCCPVCLQQNTNKKKP*

Retrieve as FASTA  
Remarks Complete from genomic (chromosome 3, 23 introns). No EST found.
DNA
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CDS
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