Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
290 |
PWM (Da): |
31338.97 |
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PI (pH):
| 9.16 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
NKFRAYIKTK CGQLISWADA PILAAAxGIA QLxGPNVVKD LYLGRKDSTK AAPRQKTLDR MPGPGYSSED LVASYSQIFR VSPKDAVYYL VTLSGAHTLG SVMCPSILPR LAGKPDNNMD
ASYHQEVSDR CTEDCNNRQW LDVYTPQKFD NLYYRVLLDN KGILAS
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Retrieve as FASTA
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Remarks |
Partial sequence from EST (corb-UMD_Coleochaete_c20956_c_s contains two frame shift). 5' and 3' ends are missing.
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AATAAGTTCC GGGCGTACAT CAAGACAAAG TGCGGGCAAC TCATTTCGTG GGCGGATGCT CCAATCCTGG CTGCAGCCKC TGGCATAGCC CAGCTTKGAG GCCCCAACGT TGTCAAGGAT
CTATACCTCG GCCGGAAGGA TAGCACCAAG GCAGCACCAA GGCAGAAAAC CTTGGACAGG ATGCCTGGTC CTGGTTACAG CTCCGAAGAC CTTGTGGCAT CCTACTCACA GATTTTCCGT
GTTAGCCCAA AAGACGCTGT CTACTACTTG GTCACTCTCT CTGGTGCCCA TACTCTTGGC AGCGTCATGT GCCCCTCCAT ATTGCCCAGA CTGGCTGGCA AGCCCGACAA CAACATGGAC
GCCAGCTACC ATCAGGAAGT CTCTGACAGG TGCACAGAGG ATTGCAACAA CAGGCAGTGG CTCGATGTCT ACACCCCACA AAAATTTGAC AATCTTTACT ACAGGGTTCT GCTTGACAAC
AAGGGCATCT TGGCAAGC
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCCGGAMTTY MYGRRMTAAA TAAGTTCCGG GCGTACATCA AGACAAAGTG CGGGCAACTC ATTTCGTGGG CGGATGCTCC AATCCTGGCT GCAGCCKCTG GCATAGCCCA GCTTKGAGGC
CCCAACGTTG TCAAGGATCT ATACCTCGGC CGGAAGGATA GCACCAAGGC AGCACCAAGG CAGAAAACCT TGGACAGGAT GCCTGGTCCT GGTTACAGCT CCGAAGACCT TGTGGCATCC
TACTCACAGA TTTTCCGTGT TAGCCCAAAA GACGCTGTCT ACTACTTGGT CACTCTCTCT GGTGCCCATA CTCTTGGCAG CGTCATGTGC CCCTCCATAT TGCCCAGACT GGCTGGCAAG
CCCGACAACA ACATGGACGC CAGCTACCAT CAGGAAGTCT CTGACAGGTG CACAGAGGAT TGCAACAACA GGCAGTGGCT CGATGTCTAC ACCCCACAAA AATTTGACAA TCTTTACTAC
AGGGTTCTGC TTGACAACAA GGGCATCTTG GCAAGCG
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Retrieve as FASTA
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