Entry information : CorPrx02
Entry ID 7719
Creation 2010-11-03 (Qiang Li)
Last sequence changes 2010-12-23 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-12-28 (Christophe Dunand)
Peroxidase information: CorPrx02
Name CorPrx02
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorPrx02
start..stop
S start..stop
CorPrx04 176 1e-57 41..166 2..123
CscPrx02 109 3e-30 9..164 51..203
CscPrx01 102 2e-27 2..166 52..212
CorPrx01 102 3e-27 2..166 55..215
Literature and cross-references CorPrx02
Literature R.Timme, C.Delwiche Personal data.
Protein sequence: CorPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   290
PWM (Da):   %s   31338.97  
PI (pH):   %s   9.16
Sequence 0
Send to BLAST
Send to Peroxiscan
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NKFRAYIKTK CGQLISWADA PILAAAxGIA QLxGPNVVKD LYLGRKDSTK AAPRQKTLDR MPGPGYSSED LVASYSQIFR VSPKDAVYYL VTLSGAHTLG SVMCPSILPR LAGKPDNNMD 
ASYHQEVSDR CTEDCNNRQW LDVYTPQKFD NLYYRVLLDN KGILAS 

Retrieve as FASTA  
Remarks Partial sequence from EST (corb-UMD_Coleochaete_c20956_c_s contains two frame shift). 5' and 3' ends are missing.
CDS
Send to BLAST
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AATAAGTTCC GGGCGTACAT CAAGACAAAG TGCGGGCAAC TCATTTCGTG GGCGGATGCT CCAATCCTGG CTGCAGCCKC TGGCATAGCC CAGCTTKGAG GCCCCAACGT TGTCAAGGAT  CTATACCTCG GCCGGAAGGA TAGCACCAAG GCAGCACCAA GGCAGAAAAC CTTGGACAGG ATGCCTGGTC CTGGTTACAG CTCCGAAGAC CTTGTGGCAT CCTACTCACA GATTTTCCGT  GTTAGCCCAA AAGACGCTGT CTACTACTTG GTCACTCTCT CTGGTGCCCA TACTCTTGGC AGCGTCATGT GCCCCTCCAT ATTGCCCAGA CTGGCTGGCA AGCCCGACAA CAACATGGAC  GCCAGCTACC ATCAGGAAGT CTCTGACAGG TGCACAGAGG ATTGCAACAA CAGGCAGTGG CTCGATGTCT ACACCCCACA AAAATTTGAC AATCTTTACT ACAGGGTTCT GCTTGACAAC 
AAGGGCATCT TGGCAAGC 

Retrieve as FASTA  
cDNA
Send to BLAST
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TCCGGAMTTY MYGRRMTAAA TAAGTTCCGG GCGTACATCA AGACAAAGTG CGGGCAACTC ATTTCGTGGG CGGATGCTCC AATCCTGGCT GCAGCCKCTG GCATAGCCCA GCTTKGAGGC  CCCAACGTTG TCAAGGATCT ATACCTCGGC CGGAAGGATA GCACCAAGGC AGCACCAAGG CAGAAAACCT TGGACAGGAT GCCTGGTCCT GGTTACAGCT CCGAAGACCT TGTGGCATCC  TACTCACAGA TTTTCCGTGT TAGCCCAAAA GACGCTGTCT ACTACTTGGT CACTCTCTCT GGTGCCCATA CTCTTGGCAG CGTCATGTGC CCCTCCATAT TGCCCAGACT GGCTGGCAAG  CCCGACAACA ACATGGACGC CAGCTACCAT CAGGAAGTCT CTGACAGGTG CACAGAGGAT TGCAACAACA GGCAGTGGCT CGATGTCTAC ACCCCACAAA AATTTGACAA TCTTTACTAC 
AGGGTTCTGC TTGACAACAA GGGCATCTTG GCAAGCG 

Retrieve as FASTA