Entry information : CorAPx03
Entry ID 7722
Creation 2010-11-03 (Qiang Li)
Last sequence changes 2010-12-02 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-12-21 (Qiang Li)
Peroxidase information: CorAPx03
Name CorAPx03
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorAPx03
start..stop
S start..stop
CscAPx03 215 7e-72 38..146 1..109
CirAPx02 178 5e-57 13..146 1..135
McalAPx05 153 5e-47 12..146 31..165
MenAPx03 137 2e-41 38..146 1..111
Literature and cross-references CorAPx03
Literature R.Timme, C.Delwiche Personal data.
Protein sequence: CorAPx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327
PWM (Da):   %s   36277.65  
PI (pH):   %s   8.58
Sequence
Send to BLAST
Send to Peroxiscan
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RKPKTDGTLS VGRRQAMVSL SAAAAAVVAF RPQAEDEALA ADLTQRLQRG EFQGKIKDAL KVGIEANPSI APLLLRLAIN DISSYDPVTK TGGANGSIRF SEEMSKPANK GLDKALKFLE 
GVKESVDSSK SGPVSWADII QFGAQA 

Retrieve as FASTA  
Remarks Partial sequence from EST (corb-UMD_Coleochaete_c10162_c_s). 5' and 3' ends are missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGAAAGCCTA AGACAGATGG AACTCTATCT GTGGGAAGAC GCCAGGCCAT GGTTAGCTTG AGTGCTGCTG CTGCTGCGGT TGTGGCTTTC AGGCCCCAAG CAGAGGATGA AGCACTCGCT  GCCGACCTCA CTCAGAGGTT ACAAAGAGGA GAGTTCCAAG GCAAGATCAA AGATGCCCTG AAGGTTGGCA TCGAGGCGAA CCCTTCCATT GCGCCTCTTC TTCTCCGTCT CGCAATTAAC  GACATCTCCT CCTACGACCC TGTGACCAAA ACGGGCGGTG CTAACGGTTC CATTCGCTTC AGTGAGGAGA TGAGCAAGCC AGCAAATAAG GGACTTGACA AGGCCCTCAA ATTCTTGGAA 
GGAGTAAAGG AAAGCGTTGA TTCCAGCAAG TCGGGCCCCG TTTCGTGGGC CGACATCATC CAGTTCGGCG CTCAAGCG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCGGGAGGAA GCAGCAGGGT CGCCTCCACC TCTCAGATGC GCCCACAGAG GCTTCTTGTG CAGAGCGTAA GGAATGACAA CGATTAGCGA AAGCCTAAGA CAGATGGAAC TCTATCTGTG  GGAAGACGCC AGGCCATGGT TAGCTTGAGT GCTGCTGCTG CTGCGGTTGT GGCTTTCAGG CCCCAAGCAG AGGATGAAGC ACTCGCTGCC GACCTCACTC AGAGGTTACA AAGAGGAGAG  TTCCAAGGCA AGATCAAAGA TGCCCTGAAG GTTGGCATCG AGGCGAACCC TTCCATTGCG CCTCTTCTTC TCCGTCTCGC AATTAACGAC ATCTCCTCCT ACGACCCTGT GACCAAAACG  GGCGGTGCTA ACGGTTCCAT TCGCTTCAGT GAGGAGATGA GCAAGCCAGC AAATAAGGGA CTTGACAAGG CCCTCAAATT CTTGGAAGGA GTAAAGGAAA GCGTTGATTC CAGCAAGTCG 
GGCCCCGTTT CGTGGGCCGA CATCATCCAG TTCGGCGCTC AAGCGG 

Retrieve as FASTA