Entry information : CorPrx04
Entry ID 7723
Creation 2010-11-03 (Qiang Li)
Last sequence changes 2010-11-03 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-12-23 (Qiang Li)
Peroxidase information: CorPrx04
Name CorPrx04
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorPrx04
start..stop
S start..stop
CorPrx02 176 1e-57 2..123 41..166
CscPrx01 102 2e-27 2..164 90..257
CorPrx01 97 1e-25 2..166 93..262
SmPrx26-2_6 93 2e-23 5..161 145..303
Literature and cross-references CorPrx04
Literature R.Timme, C.Delwiche Personal data.
Protein sequence: CorPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   343
PWM (Da):   %s   36403.73  
PI (pH):   %s   8.57
Sequence 0
Send to BLAST
Send to Peroxiscan
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TFYLGREDST KAQNLDRMPD PGFGTKQLVA FYQNLFGCSR MDAVEFPGSL SGAHTLGSVM CPSTWSRLAG KPDNRMDEGY RQEVSERCKE DCNNRQWLDV YTPEIFDNLY YRGLIDNKGV 
IASDQALWSD PAYGSQFLVK SFAESIENFF EAWAYCFLQL SLMGTR 

Retrieve as FASTA  
Remarks Partial seauence from EST (corb-UMD_Coleochaete_c10779_c_s). 5' and short 3' ends are missing.
CDS
Send to BLAST
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ACCTTCTACC TTGGTCGAGA GGACAGCACA AAGGCGCAGA ATCTGGACCG GATGCCTGAT CCCGGTTTCG GCACTAAACA ACTTGTGGCT TTTTACCAGA ATCTTTTTGG CTGTAGCAGG  ATGGATGCTG TTGAATTCCC GGGATCTCTC TCGGGTGCGC ATACTCTTGG CAGCGTCATG TGTCCCTCGA CATGGTCCAG ATTGGCGGGA AAGCCTGACA ATAGAATGGA TGAAGGCTAC  AGGCAGGAAG TCTCTGAGAG GTGCAAGGAG GATTGCAACA ACAGGCAGTG GCTCGACGTC TACACCCCAG AAATCTTTGA CAACTTGTAC TACAGGGGTC TCATCGACAA CAAGGGGGTG  ATTGCAAGTG ACCAGGCCCT CTGGTCGGAC CCTGCTTATG GCAGTCAGTT CTTGGTTAAA AGCTTTGCCG AAAGCATCGA GAACTTCTTC GAGGCATGGG CGTACTGCTT CTTGCAGTTA 
AGCTTGATGG GGACTCGTTG A 

Retrieve as FASTA  
cDNA
Send to BLAST
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GTTTGTTTGT AGGTACCTTC TACCTTGGTC GAGAGGACAG CACAAAGGCG CAGAATCTGG ACCGGATGCC TGATCCCGGT TTCGGCACTA AACAACTTGT GGCTTTTTAC CAGAATCTTT  TTGGCTGTAG CAGGATGGAT GCTGTTGAAT TCCCGGGATC TCTCTCGGGT GCGCATACTC TTGGCAGCGT CATGTGTCCC TCGACATGGT CCAGATTGGC GGGAAAGCCT GACAATAGAA  TGGATGAAGG CTACAGGCAG GAAGTCTCTG AGAGGTGCAA GGAGGATTGC AACAACAGGC AGTGGCTCGA CGTCTACACC CCAGAAATCT TTGACAACTT GTACTACAGG GGTCTCATCG  ACAACAAGGG GGTGATTGCA AGTGACCAGG CCCTCTGGTC GGACCCTGCT TATGGCAGTC AGTTCTTGGT TAAAAGCTTT GCCGAAAGCA TCGAGAACTT CTTCGAGGCA TGGGCGTACT  GCTTCTTGCA GTTAAGCTTG ATGGGGACTC GTTGATGTCG GAGGCAGGGC CAAACTCAGC AAATGAATGC AACAGTCCAA CACAACTGAG CGTTGCCGAC AAGCTGTTCC AAAGAAATCA  GAACCGAGAT TTGGGAAGTA ACTTAAAACA CTGGAGTCAC TGTATGCTGT TTGCTTCTTA TCCGTTTAAT CTTTTGATGT TTATCTTGAT GTTACTCCTA ACTGGAGTTC CTGCCCAGTG  ACCTGGGATT GGACTGCACC CATGATAATC TGTTTGTCCT CCCAGCTCTT TCATGGCTGC ATTTACGAAG CGATTCTGTC CCTTATGTTA TAGTAAGGTA GTGTCTTTCA GTTGTTGACC  ATAGGGAATG GTGCACCCTA ACTCATTCAT CATCTTCCGA CTGGCCTTGA TTGGAAACAT ATAATGACAT TAGACAGAAA CTTGGCTCGT TAAGAAACTC TTCCATAGAA TTTGTTGTTC 
ATTTCACTGG GTTCCAAGAG ACAATGTTGC CTCATTTGAA CAAATGAGTG CTTGCCTCAT GAATATTAAT CTTTCGGGAC CCCTAnnAAT GTTGAGCTT 

Retrieve as FASTA