Entry information : CorAPx-R
Entry ID 7725
Creation 2010-11-03 (Qiang Li)
Last sequence changes 2010-12-22 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-12-23 (Qiang Li)
Peroxidase information: CorAPx-R
Name CorAPx-R
Class Ascorbate peroxidase related    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorAPx-R
start..stop
S start..stop
CscAPx-R01 225 3e-77 1..151 6..155
CirAPx-R01 169 4e-54 1..150 78..226
BnAPx-R-1_other 165 2e-51 1..151 173..322
BrAPx-R-1Aa_other 165 2e-51 1..151 175..324
Literature and cross-references CorAPx-R
Literature R.Timme, C.Delwiche Personal data.
Protein sequence: CorAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   258
PWM (Da):   %s   27522.48  
PI (pH):   %s   5.05
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LIAVGGSEAV ALCGGPLIPx xxGTTRCRST RRGGRTARGD SACICSKVSL PRQKLFTTQE LVALSGAHTI GGKGFGDPRT FDNEYFKILL TKPWSDPQSE MGSMIGLQTD RFIAADEECL 
EWITVYAKDQ DRFFEDFSQA YIKLVGLGAQ WAA 

Retrieve as FASTA  
Remarks Partial sequence from EST (corb-UMD_Coleochaete_c17122_c_s). 5' end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTGATTGCTG TCGGGGGTTC TGAGGCGGTC GCGCTCTGCG GAGGACCCCT CATTCCnGnC AnnCnCGGGA CGACTCGATG CAGAAGTACC CGACGCGGAG GGAGAACTGC CAGAGGAGAC  TCTGCCTGCA TCTGCTCTAA AGTTAGCCTT CCGCGCCAAA AACTTTTCAC AACGCAAGAG CTAGTGGCGC TCTCAGGCGC ACACACGATC GGnGGGAAGG GCTTTGGAGA TCCCAGGACA  TTTGACAATG AGTACTTCAA AATTCTACTC ACCAAGCCGT GGAGCGACCC ACAATCTGAG ATGGGGTCCA TGATTGGATT GCAAACAGAT CGATTCATTG CCGCGGACGA AGAATGTCTC 
GAGTGGATTA CCGTGTATGC GAAGGATCAA GACAGATTTT TTGAAGATTT CTCTCAAGCC TATATAAAGC TGGTTGGCCT CGGCGCTCAA TGGGCAGCTT AA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGGACACAA CTTCTGTTTC GTGGGCGGAC CTTGATTGCT GTCGGGGGTT CTGAGGCGGT CGCGCTCTGC GGAGGACCCC TCATTCCnGn CAnnCnCGGG ACGACTCGAT GCAGAAGTAC  CCGACGCGGA GGGAGAACTG CCAGAGGAGA CTCTGCCTGC ATCTGCTCTA AAGTTAGCCT TCCGCGCCAA AAACTTTTCA CAACGCAAGA GCTAGTGGCG CTCTCAGGCG CACACACGAT  CGGnGGGAAG GGCTTTGGAG ATCCCAGGAC ATTTGACAAT GAGTACTTCA AAATTCTACT CACCAAGCCG TGGAGCGACC CACAATCTGA GATGGGGTCC ATGATTGGAT TGCAAACAGA  TCGATTCATT GCCGCGGACG AAGAATGTCT CGAGTGGATT ACCGTGTATG CGAAGGATCA AGACAGATTT TTTGAAGATT TCTCTCAAGC CTATATAAAG CTGGTTGGCC TCGGCGCTCA  ATGGGCAGCT TAAAACATCA TCTGTCAGCA CGTCTTCTTT TACATTACCT TTTCACGGCT TTGCTCAGAT GTCGCAGTCT ACATTTACTC CCCCCCCCCC CTCTCTCTCT CTCTCTCTCT 
CTCACACACA CACA 

Retrieve as FASTA