Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
189 (320) |
| PWM (Da): |
20378.45 (34269.5) |
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| PI (pH):
| 6.55 (8.69) |
Peptide Signal:
| cut: 26 range:26-345 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
RGNAGALLRL AFHDAFTRDE SGGGANGSIR FELNQASAVI KQEQKVSRSL NADLYMLAGA QSRGVSTGGP KILVPLGRTD SLTVDPDNLL PERRSGVDEL RKGFRVVNFT DKDLVALSGG
HTLGPATFDN TYFKQVKEKA AVFASDNNLG KDKGTLDYVI QFADDQQAFF DAFTEAYIKM SLIGWTLPA
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Retrieve as FASTA
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| Remarks |
Partial sequence from EST (corb-Contig2559, contains 2 frame shifts from +2, to +1, to +2). 5' end is missing. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGGGGAAACG CTGGTGCGCT CCTGCGGCTA GCGTTCCACG ACGCGTTCAC GCGGGACGAG TCGGGAGGAG GGGCAAACGG TTCAATCCGG TTCGAACTGA ACCAGGCCTC GGCCGTTATC
AAACAAGAGC AGAAAGTGTC CCGCTCTCTA AATGCGGATC TTTACATGCT GGCGGGTGCG CAAAGCCGTG GAGTAAGTAC AGGTGGCCCG AAGATTTTAG TTCCCCTCGG CCGCACAGAC
TCCCTCACAG TGGATCCTGA TAACCTTCTC CCTGAACGGC GATCGGGAGT GGACGAACTG AGGAAGGGCT TCAGAGTGGT TAACTTCACA GACAAAGACT TGGTGGCGCT CTCTGGTGGA
CACACGCTCG GGCCTGCCAC GTTCGACAAC ACATACTTCA AACAAGTGAA AGAGAAGGCG GCTGTCTTTG CAAGCGACAA CAACCTCGGA AAGGACAAAG GGACCTTGGA CTATGTCATC
CAGTTTGCAG ATGATCAGCA GGCTTTCTTC GACGCTTTCA CGGAGGCATA CATCAAGATG AGCCTCATTG GTTGGACCCT TCCAGCATGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGAACCCCGG AAATACGGCA CCCCGGCTGA ACAGGAGGCT CTGCGCCAGC TCGTGCACGA CGTTCTGGAC CCCATCATTG ACACGGACCC CAGTAGGAGG GGAAACGCTG GTGCGCTCCT
GCGGCTAGCG TTCCACGACG CGTTCACGCG GGACGAGTCG GGAGGAGGGG CAAACGGTTC AATCCGGTTC GAACTGAACC AGGCCTCGGC CGTTATCAAA CAAGAGCAGA AAGTGTCCCG
CTCTCTAAAT GCGGATCTTT ACATGCTGGC GGGTGCGCAA AGCCGTGGAG TAAGTACAGG TGGCCCGAAG ATTTTAGTTC CCCTCGGCCG CACAGACTCC CTCACAGTGG ATCCTGATAA
CCTTCTCCCT GAACGGCGAT CGGGAGTGGA CGAACTGAGG AAGGGCTTCA GAGTGGTTAA CTTCACAGAC AAAGACTTGG TGGCGCTCTC TGGTGGACAC ACGCTCGGGC CTGCCACGTT
CGACAACACA TACTTCAAAC AAGTGAAAGA GAAGGCGGCT GTCTTTGCAA GCGACAACAA CCTCGGAAAG GACAAAGGGA CCTTGGACTA TGTCATCCAG TTTGCAGATG ATCAGCAGGC
TTTCTTCGAC GCTTTCACGG AGGCATACAT CAAGATGAGC CTCATTGGTT GGACCCTTCC AGCATGATGG GAGCAGCTGA GAAGACGGAT CAAACAGTGA GGGATCCTAC TGCGGATCAT
GTGAAAATCT CATAGGGGAG AAGTAGGTCC CATTTAGGTT TTTGGGGTTT GGGGTGGGGT GTAGCAAAAA CTGTTCAAGT ATATACCTTT TCCAAGTGAA TGGCACCACG AAGTTTAAAC
GAGTGGAATA GGAGCGGGGA TCATGCCAAA ACACTACCTA TAGTTGTGCA TAGATTGGGT GTTGGGTTGT TAGGATTCAA GGGTCTTATG CTGGCTCCTG ACTCCAATAC ATGGCTTCTC
TCAATAGCTG AAAGAGAGCC TTCTTATTGG TTATTGCTTG CGTAGCATAG TCGGAGTTTG CGAGTTACAA GGATGGAGTT TCTGCAATTT GGGGTCGCAT GTAGCAAGCG CACAAACCAA
TGTATGATTA TCTTCATAAC CTTTTAAGTC GCTCCTATCT GCATGGACCA CTTCGACCCT TGCGTCTCTC TTGATGAGGC GTTCAGGAAG GCTAAAAAGT ACAGTGTGGT TTTTGCATCA
GACGGGAAGT TGTCGATGGT TCACAAAGAG AACAATGTTG ATAAGTGTGC CAATGAGAGA GAGAAAGAGA GAGATTGATT CAATCAACAT TGGAATTGTC TGCCGTGGCC ATAACGGGGC
AAACCACGTT CATGTCTTTG TACG
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Retrieve as FASTA
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