Entry information : CorPrx05
Entry ID 7727
Creation 2010-11-03 (Qiang Li)
Last sequence changes 2010-12-22 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-12-23 (Qiang Li)
Peroxidase information: CorPrx05
Name CorPrx05
Class Class III peroxidase     [Orthogroup: Prx084]*
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorPrx05
start..stop
S start..stop
CscPrx07 550 0 2..310 9..317
CglobPrx02 381 8e-134 4..313 1..302
CirPrx10 380 2e-133 3..310 5..311
SmPrx08-1_40 256 4e-84 1..310 31..324
Literature and cross-references CorPrx05
Literature R.Timme, C.Delwiche Personal data.
Protein sequence: CorPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332
PWM (Da):   %s   34680.99  
PI (pH):   %s   4.41
Sequence 0
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Send to Peroxiscan
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DPDFYAQTCP KAPAIVKAAI VRATKADVTN PGPLLRLFFH DCFVGPDNSG CGACDASVLL NHTGSEQEAL PNLSLTDFDI VESIKAELEA KCPGVVSCAD LLALVARFAI VVSRGPDIRI  PLGRRDSTKR ALKANAERCL PSHFSGVTGL VRNFQNVGLG LADVINLSGA HTIGQAHCSN IQDRLYNRTG AKRLDPTLDS AYAKRVLYPT CPSFKAKVPA SVEDIDAEGQ TFQDPITSVR 
FDNKYYVALT KRQGLFTSDQ QLFLDDRSRE LVKKYASNQN AFFKGFEESM IRMGNIKVLT GREGVIRKFC FRNKVSRSS 

Retrieve as FASTA  
Remarks Partial seqeunce from ESTs (corb-UMD_Coleochaete_c11399_c_s and >corb-UMD_Coleochaete_c11802_c_s(in DNA window)). Short PS is missing. 7 extra aa between FHDC and DAS. 5' end is missing.
DNA
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CGGCTGGACC CCACGCTGGA CAGTGCCTAT GCGAAGCGCG TGCTCTACCC ACGTGTCCGA GCTTCAAAGC CAAGGTGCCC GCGTCGGTCG AAGACATCGA CGCGGAGGGG CAGACGTTCC  AGGATCCGAT CACGAGCGTG AGGTTCGACA ACAAGTACTA CGTCGCTCTG ACAAAAGCGG CAGGGCCTTT TCACGTCGGA CCAGCAGCTG TTTCTGGATG ACCGCAGCCG GGAGCTCGTG  AAGAAATACG CGTCCAACCA GAATGCGTTC TTCAAAGGAT TCGAGGAGTC CATGATAAGG ATGGGGAACA TAAAGGTTTT GACGGGGAGG GAGGGAGTCA TCCGGAAGTT TTGCTTCCGG  AACAAGTAAG AGAGTGGTTG ACTGAGATAG CGCGCCTTTG CTTGAGGCCT TGACTGTGTT CCCCAGTTTT CTTCCCCCTG TCAAGGAAAA ATAAATCACT CAATCAGTGT GGAATTTTGT  AAACTTTATT TAAAGCTGCT GGGAAGCGCT CGCGGGCGTC TTCATCGGTG CATGGGCAAT GCAGCGTTGG TACTGCTATG TACGACTATA TTATGAGTCT TTTTGGATGC ACAGCGGTCA  CAAGTGATAC TACTCAGAGG TAGTAGTAGT AAAACATATG CACTGAGCGG AGTCGATTTT GTGAACTTCT GTTAAAAAAT ATGTATGTTT TGTATCTGTA ATGGACTTAT GTATTGAAAA 
TGAAATTATG TACTTG 

Retrieve as FASTA  
CDS
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GATCCTGACT TCTACGCCCA GACCTGCCCC AAAGCCCCCG CCATTGTAAA AGCCGCGATC GTCCGCGCCA CGAAAGCTGA CGTCACCAAC CCGGGCCCGC TCCTCCGCCT CTTCTTCCAC  GACTGCTTCG TGGGACCCGA CAATAGCGGC TGCGGGGCCT GCGACGCCTC TGTGCTGCTC AACCACACGG GCTCCGAGCA GGAGGCTCTC CCCAACCTCT CCCTCACGGA CTTTGACATC  GTCGAGAGCA TCAAAGCGGA ACTCGAAGCA AAGTGCCCCG GCGTGGTCTC ATGCGCCGAC CTCCTCGCCC TGGTGGCGCG CTTCGCGATA GTCGTGTCGC GCGGCCCCGA CATACGAATC  CCTCTCGGCC GACGAGATTC CACCAAGCGA GCGCTCAAGG CCAACGCCGA GAGATGCCTC CCCTCCCACT TCTCGGGCGT CACGGGCCTC GTGCGCAATT TTCAGAATGT CGGTCTCGGC  CTCGCGGATG TGATCAACCT CTCGGGGGCG CACACGATAG GGCAGGCCCA CTGCAGCAAC ATCCAGGACC GGCTCTACAA CAGGACCGGG GCAAAGCGGC TGGACCCCAC GCTGGACAGT  GCCTATGCGA AGCGCGTGCT CTACCCCACG TGTCCGAGCT TCAAAGCCAA GGTGCCCGCG TCGGTCGAAG ACATCGACGC GGAGGGGCAG ACGTTCCAGG ATCCGATCAC GAGCGTGAGG  TTCGACAACA AGTACTACGT CGCTCTGACA AAGCGGCAGG GCCTTTTCAC GTCGGACCAG CAGCTGTTTC TGGATGACCG CAGCCGGGAG CTCGTGAAGA AATACGCGTC CAACCAGAAT  GCGTTCTTCA AAGGATTCGA GGAGTCCATG ATAAGGATGG GGAACATAAA GGTTTTGACG GGGAGGGAGG GAGTCATCCG GAAGTTTTGC TTCCGGAACA AGGTCTCACG GTCTAGCTGA 

Retrieve as FASTA  
cDNA
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CGGGGATCCT GACTTCTACG CCCAGACCTG CCCCAAAGCC CCCGCCATTG TAAAAGCCGC GATCGTCCGC GCCACGAAAG CTGACGTCAC CAACCCGGGC CCGCTCCTCC GCCTCTTCTT  CCACGACTGC TTCGTGGGAC CCGACAATAG CGGCTGCGGG GCCTGCGACG CCTCTGTGCT GCTCAACCAC ACGGGCTCCG AGCAGGAGGC TCTCCCCAAC CTCTCCCTCA CGGACTTTGA  CATCGTCGAG AGCATCAAAG CGGAACTCGA AGCAAAGTGC CCCGGCGTGG TCTCATGCGC CGACCTCCTC GCCCTGGTGG CGCGCTTCGC GATAGTCGTG TCGCGCGGCC CCGACATACG  AATCCCTCTC GGCCGACGAG ATTCCACCAA GCGAGCGCTC AAGGCCAACG CCGAGAGATG CCTCCCCTCC CACTTCTCGG GCGTCACGGG CCTCGTGCGC AATTTTCAGA ATGTCGGTCT  CGGCCTCGCG GATGTGATCA ACCTCTCGGG GGCGCACACG ATAGGGCAGG CCCACTGCAG CAACATCCAG GACCGGCTCT ACAACAGGAC CGGGGCAAAG CGGCTGGACC CCACGCTGGA  CAGTGCCTAT GCGAAGCGCG TGCTCTACCC CACGTGTCCG AGCTTCAAAG CCAAGGTGCC CGCGTCGGTC GAAGACATCG ACGCGGAGGG GCAGACGTTC CAGGATCCGA TCACGAGCGT  GAGGTTCGAC AACAAGTACT ACGTCGCTCT GACAAAGCGG CAGGGCCTTT TCACGTCGGA CCAGCAGCTG TTTCTGGATG ACCGCAGCCG GGAGCTCGTG AAGAAATACG CGTCCAACCA  GAATGCGTTC TTCAAAGGAT TCGAGGAGTC CATGATAAGG ATGGGGAACA TAAAGGTTTT GACGGGGAGG GAGGGAGTCA TCCGGAAGTT TTGCTTCCGG AACAAGGTCT CACGGTCTAG  CTGAGAGACT GGTAGGCnTG CnnGTGTGGT GCGTGAGGAT CGTnnnGnGn nAATTTTGCT GTGATGGAGT GGAGAATGTT GCTCATTTTT GTTGGACATG TCCTCTGTAT AACGTCATGA  GAGAAACCTT CGATGCTGAC TTGGAAACTT GCATAGGATC TGGTCATTTT GCTGCTATTG TGTCTTGTGA TGTTGATGAA AGGACCTTGA TGGTTTTGAG TCATGAACGC TGGGGAGATG  CTGCTAACCC TCTTGATGCT GGTTTGCAGA AACATCTGAT GGATGCATGG GTGTGACGTT GTAGGCATGA GTACAACGAG AAATCATTCT ACAAAAACAT GAATGTGGTT TGCACTGGGC 
TGATATTCAG CGCGAGGCCA ATGGTCCATT GACTACAGCA GGTAATATAC CAATGCTGAT TCTCTCTCTC TCTCTGTCTC 

Retrieve as FASTA