Entry information : SpraPrx02
Entry ID 7757
Creation 2010-11-05 (Qiang Li)
Last sequence changes 2015-07-27 (Christophe Dunand)
Sequence status partial
Reviewer Catherine Mathe
Last annotation changes 2016-02-09 (Catherine Mathe)
Peroxidase information: SpraPrx02
Name SpraPrx02
Class Class III peroxidase     [Orthogroup: Prx155]*
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Zygnemataceae Spirogyra
Organism Spirogyra pratensis    [TaxId: 332123 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpraPrx02
start..stop
S start..stop
SsPrx03_AU1 419 1e-147 57..348 43..334
SpraPrx01 270 3e-89 54..348 35..326
SsPrx06_AU1 265 1e-87 48..348 26..316
SsPrx07_AU1 227 8e-73 48..343 26..313
Literature and cross-references SpraPrx02
Literature R.Timme, C.Delwich Personal data.
mRNA ref. GenBank:   JO188249.1
Protein sequence: SpraPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   348
PWM (Da):   %s   38954.18  
PI (pH):   %s   9.98
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SIHLKSHISC LYSTSLSLCK RQFSIYCFPS SPFSIGINWF RNVESQGRSL SFNYYDRQCP RLQALVEKAF VDAWRKDNTI SAAVLRLFFH DALINGVDGS ILLNGTKNNL AEKDDTDIKH  LRGFDVVDNL KALVESSCPR IVSCADVLTL LTKFAVKQAG GPTVNFKLGR LDGFASNIQL SKLLSPHHFF TSTALLNVFF RLGLSPVDLV ALSGMHTLGV AHCDSVRTRI YPQIDAMYEA 
KFGLSVRRRC PIVDGRRNPP TLDSKSKLSF DQTGMKFDNQ YFQELTSRRG LMISDNELLR DPRLNATVAR FASSQSAFFN QFRLSMIKLS EINLSSRGNV RIRCSVLN 

Retrieve as FASTA  
Remarks Pseudogene from Charles Delwiche. Frame shift + stop in frame.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGTATTCACT TGAAATCTCA TATTTCATGT CTTTATTCAA CTTCATTGTC TTTGTGCAAA CGACAATTTT CAATCTACTG CTTCCCGTCA TCGCCTTTTT CGATAGGGAT AAATTGGTTT  CGAAATGTGG AAAGCCAAGG TCGTTCATTG TCATTTAATT ATTACGATAG ACAATGCCCG CGTCTGCAAG CTTTGGTAGA GAAAGCTTTC GTAGACGCAT GGAGGAAAGA CAATACCATT  TCTGCTGCAG TTCTCCGACT TTTTTTTCAT GACGCTCTTA TCAATGGAGT CGATGGTTCT ATTTTGCTAA ATGGAACAAA AAACAACTTA GCTGAGAAAG ACGATACTGA CATCAAACAC  TTGAGAGGAT TTGATGTGGT TGATAATTTG AAAGCTTTAG TTGAATCTTC TTGTCCTAGA ATAGTATCTT GTGCTGATGT TTTGACTCTA CTGACGAAAT TTGCAGTAAA ACAAGCCGGA  GGTCCTACTG TCAACTTCAA ATTGGGCCGT TTAGATGGAT TTGCTTCCAA CATTCAACTT TCCAAACTCT TATCTCCACA CCATTTCTTC ACCTCTACTG CTCTACTCAA CGTCTTTTTT  CGTCTAGGAC TGAGCCCTGT AGACTTGGTT GCTCTCTCAG GCATGCATAC TTTAGGTGTG GCACACTGTG ATTCTGTCCG CACTCGGATT TACCCTCAGA TTGACGCCAT GTATGAAGCT  AAATTTGGAT TGTCTGTGAG AAGAAGGTGT CCTATTGTGG ATGGGAGGAG GAATCCTCCT ACTTTGGATT CCAAGTCTAA ACTAAGCTTT GATCAAACGG GCATGAAGTT CGATAATCAA  TACTTTCAAG AGCTAACATC GAGACGAGGG TTGATGATTT CGGATAATGA ATTGCTTAGA GATCCAAGGT TGAACGCTAC TGTTGCCCGT TTTGCTTCCA GCCAATCAGC CTTCTTTAAT 
CAGTTCAGGC TGAGTATGAT CAAATTAAGC GAAATTAATT TGAGTTCAAG GGGCAATGTT AGGATAAGAT GCAGTGTACT AAATTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGTATTCACT TGAAATCTCA TATTTCATGT CTTTATTCAA CTTCATTGTC TTTGTGCAAA CGACAATTTT CAATCTACTG CTTCCCGTCA TCGCCTTTTT CGATAGGGAT AAATTGGTTT  CGAAATGTGG AAAGCCAAGG TCGTTCATTG TCATTTAATT ATTACGATAG ACAATGCCCG CGTCTGCAAG CTTTGGTAGA GAAAGCTTTC GTAGACGCAT GGAGGAAAGA CAATACCATT  TCTGCTGCAG TTCTCCGACT TTTTTTTCAT GACGCTCTTA TCAATGGAGT CGATGGTTCT ATTTTGCTAA ATGGAACAAA AAACAACTTA GCTGAGAAAG ACGATACTGA CATCAAACAC  TTGAGAGGAT TTGATGTGGT TGATAATTTG AAAGCTTTAG TTGAATCTTC TTGTCCTAGA ATAGTATCTT GTGCTGATGT TTTGACTCTA CTGACGAAAT TTGCAGTAAA ACAAGCCGGA  GGTCCTACTG TCAACTTCAA ATTGGGCCGT TTAGATGGAT TTGCTTCCAA CATTCAACTT TCCAAACTCT TATCTCCACA CCATTTCTTC ACCTCTACTG CTCTACTCAA CGTCTTTTTT  CGTCTAGGAC TGAGCCCTGT AGACTTGGTT GCTCTCTCAG GCATGCATAC TTTAGGTGTG GCACACTGTG ATTCTGTCCG CACTCGGATT TACCCTCAGA TTGACGCCAT GTATGAAGCT  AAATTTGGAT TGTCTGTGAG AAGAAGGTGT CCTATTGTGG ATGGGAGGAG GAATCCTCCT ACTTTGGATT CCAAGTCTAA ACTAAGCTTT GATCAAACGG GCATGAAGTT CGATAATCAA  TACTTTCAAG AGCTAACATC GAGACGAGGG TTGATGATTT CGGATAATGA ATTGCTTAGA GATCCAAGGT TGAACGCTAC TGTTGCCCGT TTTGCTTCCA GCCAATCAGC CTTCTTTAAT 
CAGTTCAGGC TGAGTATGAT CAAATTAAGC GAAATTAATT TGAGTTCAAG GGGCAATGTT AGGATAAGAT GCAGTGTACT AAATTAA 

Retrieve as FASTA