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Entry information : PmargAPx01
Entry ID 7760
Creation 2010-11-05 (Qiang Li)
Last sequence changes 2010-11-26 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-13 (Christophe Dunand)
Peroxidase information: PmargAPx01
Name PmargAPx01
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Peniaceae Penium
Organism Penium margaritaceum    [TaxId: 102169 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmargAPx01
start..stop		 S start..stop
RobtAPx04 554 0 73..406 1..337
SsAPx04_AU1 542 0 32..408 37..421
CbrebAPx07 526 0 73..406 1..338
SpraAPx04 521 0 12..408 21..418
Literature and cross-references PmargAPx01
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO583450.1  HO611621.1  HO628950.1
Protein sequence: PmargAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   408 (203)
PWM (Da):   %s   43750.28 (22706.4) Transmb domain:   %s   o380-402i518-540o565-587i745-762o
PI (pH):   %s   8.63 (3.73) Peptide Signal:   %s   cut: 27 range:27-229
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTMAASAMRC ATAAATCCQR AQMMSASALP AATRAALSSS FVPKGLVALP VRTFSQGSSG QRRIFQRGLA VRAAADVEQL RGAKEAIKEL IQSKHCTPIL IRLGWHDSGT YDKNVSGWPA  AGGATASIRF KPEIDHAANA GLASALALLA PIKEKYPAVS YSDLFQLASA TAVEVAGGPK IPMKYGRVDA DSPKDCSPEG NLPDAGPPSP ADHLRKVFYR MGLNDKEIVA LSGAHTLGRA  RPERSGWGKA ETKYTKDGPG LPGGQSWTVD WLKFDNSYFK DVKEKKDADL LVLPTDAALF EDAEFKKYAE LYAADQDAFF ADYADAHKKL SELGSKFDPP EGVYLPEKFS AAEYSSKSNI 
SNEMKERLRK EYVSFGGSPN QPLQSNYFLN IIIAVSVLAV LAWLTGAI 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs. Short 5' is missing. Strain="SKD-2004, CL-18".
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