Entry information : BjaPxc01
Entry ID 7781
Creation 2010-11-29 (Marcel Zamocky)
Last sequence changes 2016-03-02 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-03-02 (Achraf Jemmat)
Peroxidase information: BjaPxc01
Name BjaPxc01
Class Bacterial peroxicin    [Orthogroup: Pxc001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Bradyrhizobiaceae Bradyrhizobium
Organism Bradyrhizobium japonicum    [TaxId: 375 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BjaPxc01
start..stop
S start..stop
TcurPxc01 333 1e-109 5..502 33..495
NePxc01 271 3e-85 11..503 11..498
SauPxc01 267 2e-83 1..503 35..520
GobPxc01 256 2e-78 5..503 82..533
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7947552..7949087 1536  
join(7947552..7949087)


exon

Literature and cross-references BjaPxc01
Literature Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Tabata S. (2002) Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110. DNA Res. 9:189-197.
Protein ref. GenBank:   BAC52492.1 UniProtKB:   Q89E60
DNA ref. GenBank:   BA000040.2 (7947552..7949087)
Protein sequence: BjaPxc01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   511
PWM (Da):   %s   56025.15  
PI (pH):   %s   5.2
Sequence
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Send to Peroxiscan
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MSSRHSITPR GLNATRSSLS QGRFGRMFRK LAPAKFGPND ADNVANLSAL ADKMVADFDG PKDGPDAEES GIPALYTYFG QFIDHDITFD PVSSLTKQQD PDGLVDFRTP ALDLDNLYGR  GPNDQPYMYD GIKFRLGEKL TGAGVPDASD LPRFKGRALI GDPRNDENSI VSQFQALMLR FHNRMVDDND SLSFEEVQQR VRFHYQYVVL NDFLPRIVKA DVLDELKTAG QYDRSKLAHY  HWKTYPFMPV EFSVAAYRLG HSMIRPGYRL NDAGNMLLQI FPDPHNPDTN ALTGFRAMGP GRAMDWGRFI DLDTRPYGVE DDDTNPDNKR RLQFAYRIDA SLVDPLRKLP PEVASNPSSL  ALRNLERGWR LGLPSGQAVA RAMNLTPLTD DQIIIGKAVD EPGAGDPQTG IATIANGVFA GNCPLWTYIL AEARQSPADV PIPVTGGPGT VKTPQLGPVG GRIVAEVFLG MMFGDNSSVL 
SQDPQWTPVT GASFALKDIV AYALGQGDPL H 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="USDA110".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGCAGCC GCCACAGCAT TACTCCGCGC GGCCTGAACG CAACGCGTTC GTCGCTTTCG CAAGGCCGCT TCGGCCGCAT GTTCCGCAAG CTCGCCCCGG CGAAATTCGG TCCCAACGAC  GCCGACAATG TCGCGAACCT TTCCGCGCTG GCCGACAAGA TGGTCGCCGA TTTCGATGGG CCGAAGGACG GACCGGACGC GGAGGAGAGC GGCATTCCCG CGCTCTACAC CTATTTCGGC  CAGTTCATCG ACCACGACAT CACGTTCGAT CCCGTCAGTT CGCTGACCAA GCAGCAGGAT CCCGACGGGC TCGTCGACTT CCGCACGCCG GCGCTCGATC TGGACAATCT CTACGGCCGC  GGTCCGAACG ACCAGCCCTA CATGTACGAC GGCATCAAGT TCCGCCTCGG CGAGAAGCTG ACCGGCGCGG GCGTGCCCGA TGCCAGCGAC CTGCCGCGCT TCAAGGGCCG CGCCCTGATC  GGCGATCCCC GCAACGACGA GAACAGCATC GTCTCGCAGT TCCAGGCCCT GATGCTGCGC TTTCACAACC GCATGGTCGA CGACAATGAC AGCCTGTCGT TCGAAGAGGT GCAGCAGCGC  GTCCGCTTCC ACTATCAGTA CGTCGTGCTG AACGACTTCC TGCCGCGCAT CGTCAAGGCC GACGTGCTGG ATGAACTGAA GACCGCGGGC CAATACGACC GCAGCAAGCT CGCCCACTAT  CACTGGAAGA CCTATCCGTT CATGCCGGTC GAGTTCTCGG TTGCGGCCTA CCGTCTCGGC CATTCCATGA TCCGCCCCGG CTATCGCCTG AACGATGCGG GCAACATGCT GCTGCAGATC  TTCCCCGACC CCCACAATCC CGACACGAAC GCGCTGACCG GTTTCCGCGC CATGGGCCCG GGACGCGCCA TGGACTGGGG CCGCTTCATC GATCTCGACA CGCGCCCTTA CGGCGTCGAG  GACGACGACA CCAACCCCGA CAACAAGCGG CGGCTCCAGT TCGCCTATCG CATCGATGCC TCGCTGGTGG ATCCGCTGCG CAAATTGCCG CCGGAAGTCG CGTCGAATCC GTCGTCGCTG  GCGCTGCGCA ATCTCGAGCG CGGCTGGCGG CTCGGCCTGC CCTCGGGCCA GGCGGTCGCC AGGGCGATGA ACCTGACGCC GCTGACGGAC GATCAGATCA TCATCGGCAA GGCCGTGGAC  GAGCCTGGCG CAGGCGATCC ACAAACCGGG ATCGCAACCA TCGCGAACGG CGTGTTCGCC GGCAATTGCC CGCTCTGGAC CTACATCCTG GCCGAGGCGC GGCAGTCCCC AGCCGACGTC  CCGATCCCCG TCACGGGCGG CCCCGGCACC GTCAAGACGC CGCAGCTCGG CCCCGTCGGC GGTCGCATCG TCGCCGAGGT GTTCCTCGGC ATGATGTTCG GCGACAATTC CTCCGTGCTG 
TCGCAGGATC CGCAATGGAC GCCGGTGACC GGCGCCAGTT TCGCGCTGAA GGACATCGTT GCCTACGCAC TCGGCCAGGG CGATCCGCTG CACTGA 

Retrieve as FASTA  
CDS
Send to BLAST
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ATGAGCAGCC GCCACAGCAT TACTCCGCGC GGCCTGAACG CAACGCGTTC GTCGCTTTCG CAAGGCCGCT TCGGCCGCAT GTTCCGCAAG CTCGCCCCGG CGAAATTCGG TCCCAACGAC  GCCGACAATG TCGCGAACCT TTCCGCGCTG GCCGACAAGA TGGTCGCCGA TTTCGATGGG CCGAAGGACG GACCGGACGC GGAGGAGAGC GGCATTCCCG CGCTCTACAC CTATTTCGGC  CAGTTCATCG ACCACGACAT CACGTTCGAT CCCGTCAGTT CGCTGACCAA GCAGCAGGAT CCCGACGGGC TCGTCGACTT CCGCACGCCG GCGCTCGATC TGGACAATCT CTACGGCCGC  GGTCCGAACG ACCAGCCCTA CATGTACGAC GGCATCAAGT TCCGCCTCGG CGAGAAGCTG ACCGGCGCGG GCGTGCCCGA TGCCAGCGAC CTGCCGCGCT TCAAGGGCCG CGCCCTGATC  GGCGATCCCC GCAACGACGA GAACAGCATC GTCTCGCAGT TCCAGGCCCT GATGCTGCGC TTTCACAACC GCATGGTCGA CGACAATGAC AGCCTGTCGT TCGAAGAGGT GCAGCAGCGC  GTCCGCTTCC ACTATCAGTA CGTCGTGCTG AACGACTTCC TGCCGCGCAT CGTCAAGGCC GACGTGCTGG ATGAACTGAA GACCGCGGGC CAATACGACC GCAGCAAGCT CGCCCACTAT  CACTGGAAGA CCTATCCGTT CATGCCGGTC GAGTTCTCGG TTGCGGCCTA CCGTCTCGGC CATTCCATGA TCCGCCCCGG CTATCGCCTG AACGATGCGG GCAACATGCT GCTGCAGATC  TTCCCCGACC CCCACAATCC CGACACGAAC GCGCTGACCG GTTTCCGCGC CATGGGCCCG GGACGCGCCA TGGACTGGGG CCGCTTCATC GATCTCGACA CGCGCCCTTA CGGCGTCGAG  GACGACGACA CCAACCCCGA CAACAAGCGG CGGCTCCAGT TCGCCTATCG CATCGATGCC TCGCTGGTGG ATCCGCTGCG CAAATTGCCG CCGGAAGTCG CGTCGAATCC GTCGTCGCTG  GCGCTGCGCA ATCTCGAGCG CGGCTGGCGG CTCGGCCTGC CCTCGGGCCA GGCGGTCGCC AGGGCGATGA ACCTGACGCC GCTGACGGAC GATCAGATCA TCATCGGCAA GGCCGTGGAC  GAGCCTGGCG CAGGCGATCC ACAAACCGGG ATCGCAACCA TCGCGAACGG CGTGTTCGCC GGCAATTGCC CGCTCTGGAC CTACATCCTG GCCGAGGCGC GGCAGTCCCC AGCCGACGTC  CCGATCCCCG TCACGGGCGG CCCCGGCACC GTCAAGACGC CGCAGCTCGG CCCCGTCGGC GGTCGCATCG TCGCCGAGGT GTTCCTCGGC ATGATGTTCG GCGACAATTC CTCCGTGCTG 
TCGCAGGATC CGCAATGGAC GCCGGTGACC GGCGCCAGTT TCGCGCTGAA GGACATCGTT GCCTACGCAC TCGGCCAGGG CGATCCGCTG CACTGA 

Retrieve as FASTA