Entry information : OinPxc01
Entry ID 7786
Creation 2010-11-30 (Marcel Zamocky)
Last sequence changes 2016-03-02 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-03-02 (Achraf Jemmat)
Peroxidase information: OinPxc01
Name OinPxc01
Class Bacterial peroxicin    [Orthogroup: Pxc001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhodobacteraceae Oceanibulbus
Organism Oceanibulbus indolifex    [TaxId: 225422 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OinPxc01
start..stop
S start..stop
AhspPxc01 657 0 1..601 1..587
RsphPxc01_ATCC17029 287 1e-89 85..568 59..524
RsphPxc01_241 285 5e-89 85..569 59..525
FspPxc01 279 2e-86 90..600 115..592
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 86801..88606 1806  
complement(86801..88606)


exon

Literature and cross-references OinPxc01
Literature Wagner-Dobler I., Ferriera S., Johnson J., Kravitz S., Venter J.C. (unpublished since 2007)
Protein ref. GenBank:   EDQ04050.1 UniProtKB:   A9E9F8
DNA ref. GenBank:   ABID01000005.1 (88606..86801)
Protein sequence: OinPxc01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   601
PWM (Da):   %s   66074.41  
PI (pH):   %s   5.45
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTLVIQTHGG ERRTAQPAPR ADITTDALLP EVADTAVDEA ADFGFLFPPS GNPGDYLPDN VLAELDELGD RMVPNAPNPP PPQTADPTVT ADSSLPTVLT YWGQFLDHEL TARTDRETTI  SRIETALPTK STAEIEAELK NARSPRFDLD SVYGGLAIGA NIPPATGTVI SGMRHPNHPE KMRVGTCETG GATTGPIPDG LDHHRDLPRF AQVEQKVRDA YLSLIQNRLS AVEFQKFQVG  LDKRAIIGDM RNDENLIIAQ FHLSFLRFHN KAVDYLNTHD TGWIADFHSA KTLTKLHYQW LIVDGYLKRI CDPAVVDAVL ANRARHFFEF RAAYNDRNGG TTLGNVLPLE FSVAAFRFGH  TMVRNSYDYN KNFGRPGGLL GDASFELLFD FTGGGSMNGH SRLPENWIID WDRFVNADPD NSDNIAARVA RAIDTQIAPP LGDMIKEGGD FPPGSDLHKL FRQLARRNLR RGLSLRLPTG  QALHAHLKSI GAVNSPPIAN IGDKLDNKPD LKNFLENSTA RLHERTPLWF YCLAEGEGAG GQHLGEVGSW IVASTFIATL LDDPESALSL EFGPTHSPLR MPDDTPIDTI EQWMKFALVL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Strain="HEL-45".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACATTAG TGATTCAAAC GCACGGCGGT GAACGTCGCA CTGCCCAACC TGCACCACGC GCCGATATTA CGACCGATGC CCTTCTGCCA GAGGTTGCCG ACACGGCAGT CGACGAGGCT  GCAGATTTTG GATTCTTGTT TCCACCCTCG GGCAATCCGG GAGATTATCT GCCCGATAAC GTACTGGCTG AGCTGGACGA GCTGGGAGAC CGGATGGTGC CAAACGCCCC CAATCCGCCG  CCACCGCAAA CCGCTGATCC TACTGTCACT GCAGACTCGT CCCTCCCTAC CGTGTTAACC TATTGGGGCC AATTTCTTGA CCACGAGCTG ACCGCGCGGA CCGACCGCGA AACAACAATT  TCCCGGATCG AAACTGCGCT ACCCACCAAA TCGACCGCGG AAATCGAAGC CGAACTGAAA AACGCCCGCA GCCCGCGCTT TGATCTGGAT AGTGTATATG GCGGATTAGC CATTGGTGCG  AACATTCCTC CGGCAACTGG CACCGTGATT TCCGGGATGC GACATCCTAA CCATCCGGAA AAGATGCGTG TGGGCACCTG TGAGACAGGA GGAGCCACGA CTGGACCGAT CCCTGACGGT  CTTGATCACC ATCGCGACTT ACCCCGTTTT GCGCAAGTCG AACAGAAAGT GCGAGATGCC TATCTGTCGC TTATTCAAAA CCGGCTCAGC GCCGTGGAAT TCCAGAAATT TCAAGTTGGA  TTGGACAAGC GCGCCATCAT CGGCGACATG CGCAACGACG AAAATCTCAT CATTGCGCAA TTTCATCTGA GCTTTCTTCG GTTTCACAAC AAAGCCGTGG ACTATCTCAA CACACATGAT  ACCGGCTGGA TTGCGGACTT TCATTCCGCC AAAACGCTGA CGAAGCTTCA TTACCAATGG CTTATTGTCG ACGGATACCT GAAGCGCATT TGTGATCCAG CGGTTGTGGA TGCTGTTCTT  GCAAACCGCG CCAGACATTT CTTTGAATTT CGCGCGGCCT ACAATGATCG CAACGGCGGC ACAACTCTGG GCAATGTGTT GCCTTTAGAA TTTTCAGTTG CGGCCTTTAG GTTCGGACAC  ACGATGGTGC GCAATTCATA CGACTACAAC AAAAACTTCG GACGTCCCGG CGGGCTGCTT GGAGACGCAT CCTTTGAGTT GCTGTTCGAT TTTACGGGTG GCGGCTCAAT GAACGGTCAT  TCGCGTCTCC CGGAGAACTG GATCATCGAC TGGGATCGTT TTGTTAACGC CGACCCGGAC AATTCGGATA ACATCGCAGC ACGCGTAGCC CGGGCAATTG ACACCCAGAT TGCACCGCCG  CTCGGCGACA TGATCAAAGA AGGAGGAGAT TTTCCGCCCG GTTCCGACTT ACACAAACTG TTCCGTCAAC TTGCCCGGCG TAATCTGCGG CGTGGCTTAA GCCTGCGGTT GCCCACGGGC  CAGGCCTTAC ACGCCCATCT GAAGTCTATC GGTGCGGTCA ATTCACCCCC GATTGCCAAT ATCGGCGACA AACTGGACAA CAAGCCAGAT CTGAAAAACT TCCTTGAAAA CAGCACGGCG  CGACTACACG AACGCACACC CTTGTGGTTC TACTGTCTTG CAGAAGGGGA AGGAGCCGGT GGACAGCATC TGGGCGAGGT CGGTAGCTGG ATCGTTGCAA GTACTTTCAT TGCAACACTG  CTTGATGATC CAGAAAGTGC ATTGTCGCTG GAATTCGGAC CAACGCACTC TCCGCTCCGC ATGCCGGACG ATACCCCGAT CGACACAATA GAGCAGTGGA TGAAATTCGC CCTTGTTTTG 
GAGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACATTAG TGATTCAAAC GCACGGCGGT GAACGTCGCA CTGCCCAACC TGCACCACGC GCCGATATTA CGACCGATGC CCTTCTGCCA GAGGTTGCCG ACACGGCAGT CGACGAGGCT  GCAGATTTTG GATTCTTGTT TCCACCCTCG GGCAATCCGG GAGATTATCT GCCCGATAAC GTACTGGCTG AGCTGGACGA GCTGGGAGAC CGGATGGTGC CAAACGCCCC CAATCCGCCG  CCACCGCAAA CCGCTGATCC TACTGTCACT GCAGACTCGT CCCTCCCTAC CGTGTTAACC TATTGGGGCC AATTTCTTGA CCACGAGCTG ACCGCGCGGA CCGACCGCGA AACAACAATT  TCCCGGATCG AAACTGCGCT ACCCACCAAA TCGACCGCGG AAATCGAAGC CGAACTGAAA AACGCCCGCA GCCCGCGCTT TGATCTGGAT AGTGTATATG GCGGATTAGC CATTGGTGCG  AACATTCCTC CGGCAACTGG CACCGTGATT TCCGGGATGC GACATCCTAA CCATCCGGAA AAGATGCGTG TGGGCACCTG TGAGACAGGA GGAGCCACGA CTGGACCGAT CCCTGACGGT  CTTGATCACC ATCGCGACTT ACCCCGTTTT GCGCAAGTCG AACAGAAAGT GCGAGATGCC TATCTGTCGC TTATTCAAAA CCGGCTCAGC GCCGTGGAAT TCCAGAAATT TCAAGTTGGA  TTGGACAAGC GCGCCATCAT CGGCGACATG CGCAACGACG AAAATCTCAT CATTGCGCAA TTTCATCTGA GCTTTCTTCG GTTTCACAAC AAAGCCGTGG ACTATCTCAA CACACATGAT  ACCGGCTGGA TTGCGGACTT TCATTCCGCC AAAACGCTGA CGAAGCTTCA TTACCAATGG CTTATTGTCG ACGGATACCT GAAGCGCATT TGTGATCCAG CGGTTGTGGA TGCTGTTCTT  GCAAACCGCG CCAGACATTT CTTTGAATTT CGCGCGGCCT ACAATGATCG CAACGGCGGC ACAACTCTGG GCAATGTGTT GCCTTTAGAA TTTTCAGTTG CGGCCTTTAG GTTCGGACAC  ACGATGGTGC GCAATTCATA CGACTACAAC AAAAACTTCG GACGTCCCGG CGGGCTGCTT GGAGACGCAT CCTTTGAGTT GCTGTTCGAT TTTACGGGTG GCGGCTCAAT GAACGGTCAT  TCGCGTCTCC CGGAGAACTG GATCATCGAC TGGGATCGTT TTGTTAACGC CGACCCGGAC AATTCGGATA ACATCGCAGC ACGCGTAGCC CGGGCAATTG ACACCCAGAT TGCACCGCCG  CTCGGCGACA TGATCAAAGA AGGAGGAGAT TTTCCGCCCG GTTCCGACTT ACACAAACTG TTCCGTCAAC TTGCCCGGCG TAATCTGCGG CGTGGCTTAA GCCTGCGGTT GCCCACGGGC  CAGGCCTTAC ACGCCCATCT GAAGTCTATC GGTGCGGTCA ATTCACCCCC GATTGCCAAT ATCGGCGACA AACTGGACAA CAAGCCAGAT CTGAAAAACT TCCTTGAAAA CAGCACGGCG  CGACTACACG AACGCACACC CTTGTGGTTC TACTGTCTTG CAGAAGGGGA AGGAGCCGGT GGACAGCATC TGGGCGAGGT CGGTAGCTGG ATCGTTGCAA GTACTTTCAT TGCAACACTG  CTTGATGATC CAGAAAGTGC ATTGTCGCTG GAATTCGGAC CAACGCACTC TCCGCTCCGC ATGCCGGACG ATACCCCGAT CGACACAATA GAGCAGTGGA TGAAATTCGC CCTTGTTTTG 
GAGTGA 

Retrieve as FASTA