Entry information : BdiPrx56 (Bradi2g09690)
Entry ID 7824
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx56 (Bradi2g09690)
Name (synonym) BdiPrx56 (Bradi2g09690)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer Abiotic stress
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx56
start..stop
S start..stop
HvPrx38 644 0 1..334 1..333
BdiPrx55 634 0 1..334 1..337
SiPrx17 628 0 1..334 1..334
TaPrx08-3D 627 0 1..334 1..335
Gene structure Fichier Exons


exon

Literature and cross-references BdiPrx56 (Bradi2g09690)
Literature Lucas,S., Rokhsar,D., Wang,M., Lindquist,E.A., Fox,S.E., Vogel,J., Bragg,J.N., McKenzie,N., Bevan,M.W., Garvin,D., Michael,T., Hazen,S., Chang,J., Laudencia-Chingcuanco,D., Weng,Y. and Mockler,T. DOE Joint Genome Institute Brachypodium distachyon EST project. Unpublished (2009)
DNA ref. Phytozome 12:   Bd2 (7960580..7962277)
EST ref. GenBank:   GT772405.1 [5' end]  GT772406.1 [3' end]
Protein sequence: BdiPrx56 (Bradi2g09690)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (309)
PWM (Da):   %s   35768.17 (33284.8) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.04 (7.99) Peptide Signal:   %s   cut: 26 range:26-334
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAISMGCLVVLCVVCPLLLAGAVRANPWYGLFPQFYDQSCPKAKE
IVQSIVAQAVAQETRMAASLVRLHFHDCFVK
GCDASVLLDNSSSIVSEKGSNPNLNSLRGFEVVDQIKVALEMACPGTVSCADILALAARDSTVLVGGPYWDVPLGRRDSLGASIQGSNNDLPAPNNTLPTIITKFKRLGLNIVDVVALSG
GHTIGMSRCTSFRQRLYNQSGNGRADGTLDVSYAAQLRQGCPRSGGDNNLFPLDVVSPAKFDNLYFKNILAGKGLLSSDEVLLTKSAETAALVKAYADDVHLFFQHFAQSMVNMGNITPL
TGSQGEIRKNCRRLNNYH*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, introns 1 and 2), 2 ESTs. Strain="Bd21".
DNA
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CDS
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cDNA
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