The peroxidases and oxidases database
Entry information : BdiPrx15 (Bradi1g20020)
Entry ID 7834
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx15 (Bradi1g20020)
Name (synonym) BdiPrx15 (Bradi1g20020)
Class Class III peroxidase    [Orthogroup: Prx309]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx15
start..stop		 S start..stop
BdiPrx14 412 4.33e-145 1..346 1..346
BdiPrx13 412 6.54e-145 22..347 3..330
TaPrx190-3D 352 2.61e-121 19..346 16..342
TaPrx21-1A 351 4.88e-121 25..347 25..347
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16010701..16010988 288 N° 2 16011120..16011875 756  
join(16010701..16010988,16011120..16011875)


exon

Literature and cross-references BdiPrx15 (Bradi1g20020)
DNA ref. Phytozome 12:   Bd1 (16010701..16011875)
EST ref. GenBank:   GT800427.1 [3' end]   GT800428.1 [3' end]
Protein sequence: BdiPrx15 (Bradi1g20020)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   347 (320)
PWM (Da):   %s   37687.95 (35004.5) Transmb domain:   %s   i9-31o
PI (pH):   %s   5.77 (5.77) Peptide Signal:   %s   cut: 28 range:28-347
Sequence 461
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSDKQKLVALAVVVALLGCVATICEASHGFPYPMTPREKKTIPALGLGLAFDYYKDTKCRGVEKTVRRVVKEEVDRYPGIGAGLIRLFFHDCFVEGCDASVLLKATKDNPQPEMLGIPNINSLRGFEVIDKAKDALGEECREVVSCADILAFAARDATVLLGKVKHFEMPAGRYDGKRSLASDTLPNLPPPFADVATLKAMFLEKGLNTDEMVVLSGAHTIGISHCSSFGSRINASNPSDMDPNYASELRAKCNNQPTNTVNQDFKTPDDLDRQYYQNVLDKKVLFESDAALLSSSDTEGAVKEYAEPSGKWEEKFQEAMVKMGNIGVKSKGNDAEIRKVCGSVNY*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1), 2 ESTs. Strain="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAGTGACAAGCAGAAGCTTGTGGCCTTGGCTGTGGTGGTAGCGTTGCTTGGTTGCGTGGCAACCATATGCGAAGCGAGCCATGGGTTTCCCTACCCGATGACCCCTAGAGAGAAG
AAGACCATTCCTGCCTTAGGCTTAGGGCTCGCCTTCGACTATTACAAAGATACCAAGTGCCGCGGAGTGGAGAAAACCGTGAGGCGCGTCGTGAAAGAGGAGGTGGACCGGTACCCCGGC
ATCGGTGCAGGGCTCATCCGCCTCTTCTTCCACGACTGTTTTGTCGAGGTACTTACATTTACATATACATATGTGTCTCTGTTGCAGTCAAAAAAATAAATCTTACTATCTCGATGGGTT
GATCTAGAATGTACTAGCTTGCAATTTGACACGACAGATTTATTTACTTTGGAGTCCAGGGCTGCGACGCATCGGTCCTCCTCAAGGCGACCAAGGACAACCCACAACCGGAGATGCTCG
GCATCCCCAACATCAATAGCCTGCGTGGCTTCGAAGTGATCGACAAGGCCAAAGACGCTCTCGGTGAGGAGTGCAGGGAGGTCGTGTCGTGCGCCGATATCCTGGCCTTCGCTGCGCGTG
ATGCCACCGTCCTCCTCGGGAAGGTAAAGCACTTCGAAATGCCCGCTGGCCGCTACGACGGGAAACGGTCCCTTGCCAGCGACACCCTCCCCAACCTGCCCCCTCCCTTCGCCGATGTCG
CCACCCTCAAGGCTATGTTCCTAGAGAAGGGGCTCAACACCGACGAGATGGTTGTCCTCTCTGGTGCCCACACCATCGGGATCTCCCACTGCTCATCCTTCGGCAGCCGCATCAACGCCT
CTAACCCCTCGGATATGGACCCCAATTACGCATCTGAGCTGAGGGCTAAATGCAACAACCAGCCAACGAACACGGTAAATCAGGACTTCAAGACCCCGGATGATCTAGACAGGCAGTACT
ACCAGAACGTGCTCGACAAGAAAGTGTTATTCGAATCAGACGCCGCACTCTTGTCGTCGTCAGACACAGAGGGCGCAGTGAAAGAATACGCCGAGCCCTCTGGGAAGTGGGAGGAAAAGT
TCCAGGAAGCCATGGTGAAGATGGGAAACATCGGGGTGAAGAGCAAAGGCAATGATGCCGAGATCAGGAAGGTGTGCGGGTCCGTCAACTACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAGTGACAAGCAGAAGCTTGTGGCCTTGGCTGTGGTGGTAGCGTTGCTTGGTTGCGTGGCAACCATATGCGAAGCGAGCCATGGGTTTCCCTACCCGATGACCCCTAGAGAGAAG
AAGACCATTCCTGCCTTAGGCTTAGGGCTCGCCTTCGACTATTACAAAGATACCAAGTGCCGCGGAGTGGAGAAAACCGTGAGGCGCGTCGTGAAAGAGGAGGTGGACCGGTACCCCGGC
ATCGGTGCAGGGCTCATCCGCCTCTTCTTCCACGACTGTTTTGTCGAGGGCTGCGACGCATCGGTCCTCCTCAAGGCGACCAAGGACAACCCACAACCGGAGATGCTCGGCATCCCCAAC
ATCAATAGCCTGCGTGGCTTCGAAGTGATCGACAAGGCCAAAGACGCTCTCGGTGAGGAGTGCAGGGAGGTCGTGTCGTGCGCCGATATCCTGGCCTTCGCTGCGCGTGATGCCACCGTC
CTCCTCGGGAAGGTAAAGCACTTCGAAATGCCCGCTGGCCGCTACGACGGGAAACGGTCCCTTGCCAGCGACACCCTCCCCAACCTGCCCCCTCCCTTCGCCGATGTCGCCACCCTCAAG
GCTATGTTCCTAGAGAAGGGGCTCAACACCGACGAGATGGTTGTCCTCTCTGGTGCCCACACCATCGGGATCTCCCACTGCTCATCCTTCGGCAGCCGCATCAACGCCTCTAACCCCTCG
GATATGGACCCCAATTACGCATCTGAGCTGAGGGCTAAATGCAACAACCAGCCAACGAACACGGTAAATCAGGACTTCAAGACCCCGGATGATCTAGACAGGCAGTACTACCAGAACGTG
CTCGACAAGAAAGTGTTATTCGAATCAGACGCCGCACTCTTGTCGTCGTCAGACACAGAGGGCGCAGTGAAAGAATACGCCGAGCCCTCTGGGAAGTGGGAGGAAAAGTTCCAGGAAGCC
ATGGTGAAGATGGGAAACATCGGGGTGAAGAGCAAAGGCAATGATGCCGAGATCAGGAAGGTGTGCGGGTCCGTCAACTACTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTTCACCCAT CATCCTTCCT TCTTATCTCC TCTCTTCTCT TGAGCTTCAC AGCAAGCAAC CATGGGTAGT GACAAGCAGA AGCTTGTGGC CTTGGCTGTG GTGGTAGCGT TGCTTGGTTG  CGTGGCAACC ATATGCGAAG CGAGCCATGG GTTTCCCTAC CCGATGACCC CTAGAGAGAA GAAGACCATT CCTGCCTTAG GCTTAGGGCT CGCCTTCGAC TATTACAAAG ATACCAAGTG  CCGCGGAGTG GAGAAAACCG TGAGGCGCGT CGTGAAAGAG GAGGTGGACC GGTACCCCGG CATCGGTGCA GGGCTCATCC GCCTCTTCTT CCACGACTGT TTTGTCGAGG GCTGCGACGC  ATCGGTCCTC CTCAAGGCGA CCAAGGACAA CCCACAACCG GAGATGCTCG GCATCCCCAA CATCAATAGC CTGCGTGGCT TCGAAGTGAT CGACAAGGCC AAAGACGCTC TCGGTGAGGA  GTGCAGGGAG GTCGTGTCGT GCGCCGATAT CCTGGCCTTC GCTGCGCGTG ATGCCACCGT CCTCCTCGGG AAGGTAAAGC ACTTCGAAAT GCCCGCTGGC CGCTACGACG GGAAACGGTC  CCTTGCCAGC GACACCCTCC CCAACCTGCC CCCTCCCTTC GCCGATGTCG CCACCCTCAA GGCTATGTTC CTAGAGAAGG GGCTCAACAC CGACGAGATG GTTGTCCTCT CTGGTGCCCA  CACCATCGGG ATCTCCCACT GCTCATCCTT CGGCAGCCGC ATCAACGCCT CTAACCCCTC GGATATGGAC CCCAATTACG CATCTGAGCT GAGGGCTAAA TGCAACAACC AGCCAACGAA  CACGGTAAAT CAGGACTTCA AGACCCCGGA TGATCTAGAC AGGCAGTACT ACCAGAACGT GCTCGACAAG AAAGTGTTAT TCGAATCAGA CGCCGCACTC TTGTCGTCGT CAGACACAGA  GGGCGCAGTG AAAGAATACG CCGAGCCCTC TGGGAAGTGG GAGGAAAAGT TCCAGGAAGC CATGGTGAAG ATGGGAAACA TCGGGGTGAA GAGCAAAGGC AATGATGCCG AGATCAGGAA  GGTGTGCGGG TCCGTCAACT ACTGATCCAA TGATCATGCA TGCATACATC ATCTTATTAA TCCACTCAAC ATCAACACCT GTGACCTTAC CGAGATTTTG CTGTGTGTAC GCTATTTTGG  AATTTCCGTT CATTGTTGTT TAATTATTTA ATTTCACTAA ACTATCTTGC TTTATTATCG GGTTACATTT GTATAATGAA GTTATGGTTG TACTTCCATC TATTAACGAG AGTTCCGTGC 
TACTTCTTGT GCTACTTCTT GTTT 

Retrieve as FASTA