View Redoxidase 7843

Entry information : BdiPrx49 (Bradi1g77140)

Entry ID	7843
Creation	2011-01-12 (Toky Ramarohetra)
Last sequence changes	2011-01-12 (Toky Ramarohetra)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2014-01-08 (Qiang Li)

Peroxidase information: BdiPrx49 (Bradi1g77140)

Name (synonym)

BdiPrx49 (Bradi1g77140)

Class

Class III peroxidase [Orthogroup: Prx021]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium

Organism

Brachypodium distachyon [TaxId: 15368 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BdiPrx49 start..stop	S start..stop
TaPrx55-1B	523	0	35..331	33..329
TaPrx55-1D	523	0	35..331	33..329
TaPrx55-1A	523	0	1..331	1..329
HvPrx27	517	0	35..331	11..307

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7843' 'join(73503876..73504118,73504747..73504935,73506727..73507296)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	73503876..73504118	241	N° 2	73504747..73504935	187	N° 3	73506727..73507296	568
join(73503876..73504118,73504747..73504935,73506727..73507296)

Literature and cross-references BdiPrx49 (Bradi1g77140)

DNA ref.	Phytozome 12: Bd1 (73503876..73507296)

Protein sequence: BdiPrx49 (Bradi1g77140)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	333 (299)
PWM (Da):	34590.3 (30864.2)
PI (pH):	7.68 (5.71)	Peptide Signal:	cut: 35 range:35-333

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEAQARGGLRIPIPIRMRLLVVMLVLMAARPAMAQLAVGYYDTLC
PAAEIIVQEEVSKGVSGSPGTAAGLLRLHFHDCFVRGCDASVLLDSTPGNKAEKDAPPNSSLRGFDVIDKAKTRLEQACYRVVSCADILAFAARDALALVGGSAYQVPAGRRDGNVSSAGETNGNLPPPTANVNQLTQIFGSKGLSKAQMVTLSGA
HTVGAAQCSSFSSRLYSSGPNGGQDPTMDPKYLTALTAQCPQKGAQQAVPMDPVTPNAFDTNYYANLVANRGLLSSDQALLADPNASAQVVAYTSSPDTFQTDFANAMIAMGNVGVLTGN
AGNIRTNCRVAS*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 1, intron 1, 2 and 3), no EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAAGCGCAGGCCAGAGGAGGATTGAGAATTCCAATTCCAATTCGAATGCGGCTGTTGGTTGTGATGCTGGTGCTGATGGCGGCGAGGCCGGCGATGGCGCAGCTGGCCGTGGGGTAC
TACGACACGCTGTGCCCGGCGGCGGAGATCATCGTGCAGGAGGAGGTCAGCAAGGGCGTCTCCGGCAGCCCCGGCACGGCCGCGGGGCTCCTCCGGCTCCACTTCCACGACTGCTTCGTC
AGGGGGTCAGTACTAAGAACACTGCTATATATGCTGCAGCCAGCAAATTCAGGTCCTCCAATTCATCATCCGTTGATTAATGAGGCCACCAGCTTCCAGTTCGGCGTAAGAGTGTGCAGG
TAGATGGATAGACAATTAGACAGATAGATTGATACTTGGTCTGTTCTCTGCCTTCTGCTTCGTCTGTTTCTTGGTCTGTTCTCGCGTATCTGCTGCCTTTTACATCAGATACGAAAGGAA
TCGGGCAGTAGTAGATGTGGGGAGGTAGATGGCGCTCTGCACGCATGGACGGACCTGGCCGGGCGCTTGGAGCCTTGGAGCCAGGAATGGCGACAGTCTGACAGGCCGTTGTCATGTGCA
TGTTCAGTTCCAAAAGTTACCTCAACAATCACATTTTCCTCTCTCTGTTTCCTTTCTTTTCCCAAACAAAAAAAAGAAAAGAAGAAGGATACAGCTTCCACCGTACAGTCCAGCCATCCA
AACGTGACGGTGTAGTAGTAGAGCCTAGGACAGTGATGATGCGTGCGCGTTGTTTCATTGCTAATTTCATCTGACATCATCACGAATTCATTCATCATCATCACCTTCTTTGCTCTGCTG
AGTCGTTTACTGAAACTGCAATTGCGATTGCAGGGGTGCGACGCGTCGGTGCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAAGGACGCGCCGCCAAACTCGAGCCTCCGGGGGTTC
GACGTGATCGACAAGGCCAAGACGCGGCTCGAGCAGGCCTGCTACCGGGTCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCCGAGACGCCCTCGCCCTGTGGTAAACACACCTCACC
TTCCCCTGCCATTTCACATGTCACTGTTACTTCCCTCCATTCTTACCATCTGCAAGCTCCGAGTCGAGCGAACTTGCTCTCGGATCACGCGCAGAGGGACGTGATCTTCTGGAATACAGT
ATATTAACACACATGGGGGGCGCCTCTACCGATCTCCCTAATTATGCCTTTACCGAATGGCACCAAGCTTTTCCCTCGACCTTTCTCAGAAAAGCAAGGCTGCCTTTTACAACTCCTCCT
CTCATCTCCTCCAACAGCAGGAACAACATCCTTTGCTTTCCAAAGGGCACATTTGTACCGTAATAAGTATGCTGCCGCCTGCCTCCATCGAACGACGATATGCCTGGACAAAGAAAAGAA
ATGAATGTCTCGTTCGGGCAGCCGAATCCGGCATTGCTTTGCTCAGTCTGCGTTCCGGTGGGCACCGCACGGGGCATGCCTGTCTAAGCAACGTTTTGGCACCGCATCTGGCTGGCCCGT
TGCGTTGGGCACACGGGAGTCCGTTACGGCAGGCCAAGCGGTCGGTGTCCGTATGTGCATCAACAGCTAGCTATCAGACCGGCGTCTCCTATCCTATCCTGCGTACTCTGGCTCACATGG
CCGTGTCGCGCTCACACCGCTTCGAGAAGATCAAGAAACAAAGGAAACCTCGTTAATTTGCTTTCTCCCGAGCCTTCTTTTTCAGATGTGGCGATACAAAGGACAGGATCCGATCTGTCC
GATCGTGGCACGGTGCAGGGGGTTCAGTCAGTTAGAAAGTTTACCTAGCTTGGGCCTTTTGTTCTTTTCGTTTTTACCAGCAGTAGAATCGAGCTCTGGCACGTGTAGTGTTGGGCTAAA
GGCCAAATCATTCCCCGATCGAGCTTTGCACCGATCACTATGCAACAAGAAAAATCGTGAACCAGATGGCATCCACATGTTACTGAGCGCATGCAGGGGGACGAAGCTCGCACACCGAAG
CAAATGATGAACTTGAGTGCTTCTAGAGTTTGTTGCTCTTTCCCGATGGAGGCAAGAATAGTTAAATTTCTCTGTCAGTCTTGCTCACGACAACGGTAGTTAACAGAAAATTAATGTGTT
AGCTAGTCATAGGGTGGAGTACACTGCTAGTCATACTACCGTTGCAGCTTTATGTGAGTGATACTGAAAGAAGTCAACGTGTTAGTATCAAGATTGATTATGGTTGATCACCGAGCACTT
GGCAGCAGCTCTTGCGACTGATCAAAGTGCATGAGCTTGAGCAGAACACTCCATGTCATGATGACCGAATACTGCCAGTGCGAGAGTGATAGTGAAGCCTGACTCACTCAGAGCTGGAAA
CAGCACATACAGGCGTTTCCCTTAAATAAACAGCACATCTGCACATAAAGGCCTCCCCTTCATGGGAAAAAGACACAGGCCACCACCAGAAACTACACTCGTGAGGACGACCGGCCGTTC
GTTCGGCCCCCAAATCAATTACCAGTAATCAAAAGAAGGGGGTTAATGGCGAGAGAGCTATCAGCAGGATTCCGGTCATCGAGTGGCGCACGTCAAGATACGTTCAGGGCCGGTCGACTT
CTATAGTTTAGTTCAGTTACGACGTGGATCCGTCCCACGCCCATGTGGCCTGCACATGCCCCATGACCCACGAATTCCGTCTCCATTCCCCAGTTGGATGGCATGGAGCCCATTGCCCGC
GCTCACCACAAAAACGAACGGAAACAAAGCAATTCCTCTCTATATTCACTTTCTAATTCACTGAAACTTATGAGCTGTGTTTGTGTGTGTTGCAGGTGGGAGGCAGCGCGTACCAGGTGC
CGGCGGGGCGACGAGACGGGAACGTCTCGTCGGCCGGCGAAACCAACGGGAACCTGCCACCGCCCACGGCCAACGTGAACCAGCTGACCCAGATCTTCGGCTCCAAGGGCCTCTCCAAGG
CCCAGATGGTGACGCTGTCGGGGGCGCACACGGTGGGCGCGGCCCAGTGCAGCTCCTTCAGCAGCAGGCTCTACTCGTCGGGCCCCAACGGGGGCCAGGACCCGACCATGGACCCCAAGT
ACCTGACGGCCCTCACGGCCCAGTGCCCGCAGAAAGGGGCCCAGCAGGCCGTGCCCATGGACCCCGTCACGCCCAACGCCTTCGACACGAATTATTACGCCAATCTGGTGGCTAACCGGG
GCCTGCTGTCTTCCGACCAGGCGCTGCTCGCCGACCCGAACGCGTCCGCTCAGGTGGTCGCCTACACCAGCAGCCCTGACACGTTCCAGACCGACTTTGCTAATGCCATGATCGCCATGG
GGAATGTTGGCGTGCTCACTGGGAACGCCGGGAACATCAGGACCAACTGCAGAGTAGCCTCCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CCTATAAACC ACACCCTGAT ATTCTCCTCC CCACCCTTCT TCTTAACCAA GAAGCACTTC CTCACTGAAA CAAGCCTCAA ACCGTCTAGC TCTCGCAAGA TTAGCCCTTA AGCAAGAGCT GAGAATTGGC AATCCAGAGC TAGTTTTTCT GGACCAAAAA TCCAGAGCTA GTTAAGCAGG GAGAGAGAGA TGGAAGCGCA GGCCAGAGGA GGATTGAGAA TTCCAATTCC AATTCGAATG CGGCTGTTGG TTGTGATGCT GGTGCTGATG GCGGCGAGGC CGGCGATGGC GCAGCTGGCC GTGGGGTACT ACGACACGCT GTGCCCGGCG GCGGAGATCA TCGTGCAGGA GGAGGTCAGC AAGGGCGTCT CCGGCAGCCC CGGCACGGCC GCGGGGCTCC TCCGGCTCCA CTTCCACGAC TGCTTCGTCA GGGGGTGCGA CGCGTCGGTG CTGCTGGACT CGACGCCGGG GAACAAGGCG GAGAAGGACG CGCCGCCAAA CTCGAGCCTC CGGGGGTTCG ACGTGATCGA CAAGGCCAAG ACGCGGCTCG AGCAGGCCTG CTACCGGGTC GTCTCCTGCG CCGACATCCT CGCCTTCGCC GCCCGAGACG CCCTCGCCCT GGTGGGAGGC AGCGCGTACC AGGTGCCGGC GGGGCGACGA GACGGGAACG TCTCGTCGGC CGGCGAAACC AACGGGAACC TGCCACCGCC CACGGCCAAC GTGAACCAGC TGACCCAGAT CTTCGGCTCC AAGGGCCTCT CCAAGGCCCA GATGGTGACG CTGTCGGGGG CGCACACGGT GGGCGCGGCC CAGTGCAGCT CCTTCAGCAG CAGGCTCTAC TCGTCGGGCC CCAACGGGGG CCAGGACCCG ACCATGGACC CCAAGTACCT GACGGCCCTC ACGGCCCAGT GCCCGCAGAA AGGGGCCCAG CAGGCCGTGC CCATGGACCC CGTCACGCCC AACGCCTTCG ACACGAATTA TTACGCCAAT CTGGTGGCTA ACCGGGGCCT GCTGTCTTCC GACCAGGCGC TGCTCGCCGA CCCGAACGCG TCCGCTCAGG TGGTCGCCTA CACCAGCAGC CCTGACACGT TCCAGACCGA CTTTGCTAAT GCCATGATCG CCATGGGGAA TGTTGGCGTG CTCACTGGGA ACGCCGGGAA CATCAGGACC AACTGCAGAG TAGCCTCCTG ATTCAGCTGA GATTAGAGTT GATCGATTGA AGGCTTGGTT CAAATGTATG TAGTCCGTTC TGTCGTGCTA GCTAGCTAGC TTAATTAGCT CCTCCCATCT TTTTTCTTCT CCTTTTCCTC TCTTACATAT ATAGTACTGG TACTTTCCTT TTGTGCTTGG ATTCTTTTAG CCTCTGTATG TAGTATCTAG CTAGCTAGCT AGTTACCGGA TTCATAACTG TATATGTGAT GATTGGATAC CCAACAGTGC
TTAATAAGAA GCTATATATA CGGATCGGAA CAGGCAGTTG CTGCCACTGT

Retrieve as FASTA