1. Browse the Database
  2. View Redoxidase
Entry information : BdiPrx45(Bradi1g68887)
Entry ID 7846
Creation 2011-01-13 (Toky Ramarohetra)
Last sequence changes 2011-01-13 (Toky Ramarohetra)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2023-01-18 (Christophe Dunand)
Peroxidase information: BdiPrx45(Bradi1g68887)
Name BdiPrx45(Bradi1g68887)
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx45
start..stop		 S start..stop
TaPrx84-1B 525 0 15..334 11..329
SiPrx153 525 0 29..334 28..332
TaPrx84-1A 522 0 17..334 12..329
TaPrx84-1D 521 0 17..334 12..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7846' 'join(67349688..67349927,67350031..67350213,67350315..67350480,67350581..67350996)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 67349688..67349927 238 N° 2 67350031..67350213 181 N° 3 67350315..67350480 164 N° 4 67350581..67350996 414
join(67349688..67349927,67350031..67350213,67350315..67350480,67350581..67350996 )


exon

Literature and cross-references BdiPrx45(Bradi1g68887)
DNA ref. Phytozome 12:   Bd1 (67349688..67350996)
Protein sequence: BdiPrx45(Bradi1g68887)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (301)
PWM (Da):   %s   34980.3 (31587.6) Transmb domain:   %s   i13-32o (i13-32o)
PI (pH):   %s   6.03 (5.35) Peptide Signal:   %s   cut: 34 range:34-334
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEYSAGRDRRSRLCCLLGVVAAVLLCLGTAASGELTDDFYDDCCP
NLDRIVRARVSAAMKAEPRMGASLLRLHFHDCFVNGCDGSILLDGSNSEKLAAPNLNSARGFEVVDAIKADIERACPGHVSCADVLALAAKYGVLLSGGPDYDVLLGRRDGLVANQSGADSNLPGPDDSISDITKRFKDVGLNTTDMVVLSGGHT
IGRSRCALFSNRLANFSATNSVDPTLDSALASSLQQVCRGGDGNQTAALDDGSADAFDNHYFKNLLAKKGLLSSDQILFSSADAAAATKALVQAYGADSQRFFCDFGNSMVKMGNIAPLT
GSAGQIRKKCRAVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 1, intron 1, 2 and 3), no EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTACTCTGCAGGCAGAGATCGTAGGAGCCGGCTCTGCTGCTTGCTCGGAGTCGTCGCAGCCGTGCTGCTGTGCCTGGGAACCGCGGCGAGCGGCGAGCTGACGGACGACTTCTAC
GACGACTGCTGCCCCAACCTGGACAGGATCGTCCGGGCGCGCGTGTCCGCCGCCATGAAGGCCGAGCCCAGGATGGGCGCCTCTCTGCTCAGGCTCCACTTCCACGACTGCTTCGTCAAC
ACGTACGTAAACACACATGCATGCACCTCTGTTTTGGACTCTGTCCTCGATCATGTTTTGCTGAAAAAGACTTGAATGCACGTGTGCGCGCATGCATGCATGCAGGGTTGCGACGGGTCG
ATCCTGCTGGACGGGAGCAACAGCGAGAAGCTGGCGGCGCCGAACCTGAACTCGGCGAGGGGATTCGAGGTCGTGGACGCCATCAAGGCCGACATCGAGCGCGCGTGCCCCGGGCACGTT
TCATGCGCCGACGTCCTCGCGCTCGCCGCTAAATATGGCGTACTGCTGTGGTTCGGTTTCCTTCCTCCACCGTATCAAGTTGGTTCAAGGAACATGTTGTCCTTTTCTTTAAGCATGCAA
GCATGACACTGTATTTTGCTGATATGTCCAGAGTGGAGGGCCTGATTACGATGTTCTCCTGGGAAGAAGGGACGGTCTGGTGGCGAATCAGTCCGGAGCTGACAGCAACCTGCCGGGGCC
GGACGATTCGATCAGCGATATCACAAAGAGGTTCAAGGACGTCGGCTTGAATACAACCGACATGGTCGTCTTATCAGAGGTACGGGTGTCAGTATTAGTATCAGACTATCAGCCCTTTGC
GATCTGTATGTATAGCTGAATTATCAGTGGTTGGTTGCTGAACCGAATTGCATGTACAGGAGGCCACACGATCGGGCGATCCCGGTGCGCGCTCTTCAGCAACCGGCTGGCCAACTTCTC
GGCGACCAACTCGGTGGACCCGACGCTGGACTCGGCGCTGGCGTCCAGCCTGCAGCAGGTGTGCCGGGGCGGGGACGGCAACCAGACGGCGGCGCTGGACGACGGCTCCGCCGACGCCTT
CGACAACCACTACTTCAAGAACCTGCTCGCCAAGAAGGGCCTCCTCTCCTCGGACCAGATCCTCTTCTCCAGCGCCGACGCCGCGGCCGCCACCAAGGCGCTCGTGCAGGCCTACGGCGC
CGACAGCCAGCGCTTCTTCTGCGACTTCGGCAACTCCATGGTCAAGATGGGCAACATCGCCCCGCTCACCGGCTCGGCCGGCCAGATCCGCAAGAAATGCAGAGCAGTCAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTACTCTGCAGGCAGAGATCGTAGGAGCCGGCTCTGCTGCTTGCTCGGAGTCGTCGCAGCCGTGCTGCTGTGCCTGGGAACCGCGGCGAGCGGCGAGCTGACGGACGACTTCTAC
GACGACTGCTGCCCCAACCTGGACAGGATCGTCCGGGCGCGCGTGTCCGCCGCCATGAAGGCCGAGCCCAGGATGGGCGCCTCTCTGCTCAGGCTCCACTTCCACGACTGCTTCGTCAAC
GGTTGCGACGGGTCGATCCTGCTGGACGGGAGCAACAGCGAGAAGCTGGCGGCGCCGAACCTGAACTCGGCGAGGGGATTCGAGGTCGTGGACGCCATCAAGGCCGACATCGAGCGCGCG
TGCCCCGGGCACGTTTCATGCGCCGACGTCCTCGCGCTCGCCGCTAAATATGGCGTACTGCTGAGTGGAGGGCCTGATTACGATGTTCTCCTGGGAAGAAGGGACGGTCTGGTGGCGAAT
CAGTCCGGAGCTGACAGCAACCTGCCGGGGCCGGACGATTCGATCAGCGATATCACAAAGAGGTTCAAGGACGTCGGCTTGAATACAACCGACATGGTCGTCTTATCAGGAGGCCACACG
ATCGGGCGATCCCGGTGCGCGCTCTTCAGCAACCGGCTGGCCAACTTCTCGGCGACCAACTCGGTGGACCCGACGCTGGACTCGGCGCTGGCGTCCAGCCTGCAGCAGGTGTGCCGGGGC
GGGGACGGCAACCAGACGGCGGCGCTGGACGACGGCTCCGCCGACGCCTTCGACAACCACTACTTCAAGAACCTGCTCGCCAAGAAGGGCCTCCTCTCCTCGGACCAGATCCTCTTCTCC
AGCGCCGACGCCGCGGCCGCCACCAAGGCGCTCGTGCAGGCCTACGGCGCCGACAGCCAGCGCTTCTTCTGCGACTTCGGCAACTCCATGGTCAAGATGGGCAACATCGCCCCGCTCACC
GGCTCGGCCGGCCAGATCCGCAAGAAATGCAGAGCAGTCAACTGA

Retrieve as FASTA