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Entry information : BdiAPx02 (Bradi1g65820)
Entry ID 7848
Creation 2011-01-13 (Toky Ramarohetra)
Last sequence changes 2011-01-13 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-19 (Toky Ramarohetra (Scipio))
Peroxidase information: BdiAPx02 (Bradi1g65820)
Name (synonym) BdiAPx02 (Bradi1g65820)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiAPx02
start..stop		 S start..stop
TaAPx05-1B 500 0 1..250 1..250
TaAPx05-1A 499 0 1..250 1..250
TaAPx05-1D 498 0 1..250 1..250
TmAPx01 496 0 1..250 1..250
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7848' 'complement(join(64743809..64743824,64743912..64743970,64744054..64744156,64744271..64744350,64744434..64744519,64744990..64745038,64745848..64745913,64746016..64746190,64746262..64746380))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 64746262..64746380 117 N° 2 64746016..64746190 173 N° 3 64745848..64745913 64 N° 4 64744990..64745038 47
N° 5 64744434..64744519 84 N° 6 64744271..64744350 78 N° 7 64744054..64744156 101 N° 8 64743912..64743970 57
N° 9 64743809..64743824 14  
complement(join(64743809..64743824,64743912..64743970,64744054..64744156,6474427 1..64744350,64744434..64744519,64744990..64745038,64745848..64745913,64746016..6 4746190,64746262..64746380))


exon

Literature and cross-references BdiAPx02 (Bradi1g65820)
DNA ref. Phytozome 12:   Bd1 (64746380..64743809)
Protein sequence: BdiAPx02 (Bradi1g65820)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250 (746)
PWM (Da):   %s   27407.96 (81298.2)  
PI (pH):   %s   6.17 (6.46) Peptide Signal:   %s   cut: 19 range:19-764
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKTYPTVSAEYQEAVEKARRKLRALIAEKSCAPLMLRLAWHSAGTFDVSSKTGGPFGTMKKPAEQAHAANAGLDIAVRMLEPIKEEIPTISYADLYLAGVVAVEVSGGPEIPFHPGREDKPQPPPEGRLPDATKGSDHLRQVFGKQMGLSDQDIVALS
GGHTGRCHKERSGFEGPWTREPLKFDNTYFTELLSGDKEGLLQLPSDKTLLSDPVFRPLVEKYADEKAFFEDYKEAHLRLSELGYAEA

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 7 introns), 34 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAAGACCTACCCGACCGTGAGCGCTGAGTACCAGGAGGCCGTCGAGAAGGCCAGGCGCAAGCTGCGCGCCCTCATCGCCGAGAAGAGCTGCGCCCCGCTCATGCTCCGCCTCGCG
TAAGTTCCCTCTCCTGTCCGCGCTCGTGTCGCGGGGGATTTCCGTTGTCTGATCTGAGATCGCCGCGCAGGTGTGGCACTCCGCTGGGACCTTCGACGTGTCGTCGAAGACCGGCGGCCC
GTTCGGTACGATGAAGAAACCGGCCGAGCAGGCGCACGCCGCCAACGCGGGGCTGGACATCGCGGTGCGGATGCTCGAGCCTATCAAGGAGGAGATCCCCACCATCTCTTACGCCGATCT
CTACCAGGTTCGACCCGAATACGGTTAGATCTGGTTGAACGGCCCGATCTGGTCGAATGGACGTGATTTCTGAAAAAAAAATTGCGTCTGTTTTTGTTTCTCTGTGTAGCTCTTGCGGGA
GTTGTCGCCGTGGAGGTGTCCGGTGGACCTGAGATCCCCTTTCACCCAGGGAGGGAGGTGAGATTTCTCAACCTTGAAGTAGTCTCAGGGTTTTAGAGAATTTAACTCCGCAGGGGTACT
GTGCATAGGTTGGTGATGCTGAGTTTTAAGGCTTTGTCCTGATGTGCTTTTAGTCTATGGGTTGGTTGCTCTTGGAAAAAGCGATTACATTAGTCTTTGGCCGGCGACTTTTTTTAGTTT
AATAGGACTGAGGTTTCTGGTTGTAATATTTTAGAATAGTTTGTGTTTATCATCATAAGGTATGGTTTATGTTAAGTGGTGTTTGTGTCCTGGACTGTTCGTGTTGGTTGGCCGCAAGCC
CGCAACGTTTTTGTTGCTTGGACTTGACATGCTTACTGTCGTCCTTAAGGGTTGGATTACTGGGTTAATGTACCATAATAATTGTAATGTGACTACTTTTGATTGCATTTTTACTCCGTG
ATAGGAGCAGTGGCAAGTTGATTTAATCAGTCATGATATTAGTTCTTGCTGGTTCCCACTTCGATCCAAATTAATCTGAGACTGATTTAATCTGTCATGATACAAGTTGGTTCCATGGGT
AGCCTTAATAAGAGTTCCCTGGCTCATTACTGTATTCCAGAACTTAGCAACTACTCCCTCCGATCCATAATAAGTGTCTCACACTTAGTACAACTTTGTACTAGCCGAGTACAAAATCTG
ACACACTTATTATGGATCGGAGGGAGTAATTACAAATATTTCTGTTTTTGTGTTCTTGCAATTAAACAGAATGTGAAGTTATCACCTGATCTGTTTCGTTGTTTTTGTCTACCCAAGAAC
ATCTTACAATCCTATTCCTTTTCCAGGAGACAAGCCTCAGCCCCCACCTGAGGGTCGCCTTCCTGATGCTACCAAGGGTATCTTTCTAACCCATGCTATATTTCTTGCAATTTTTCACTA
GTAACAAATATTTATCACTATTACTAACTGCGTGGAACCCATGTACTCCCTCAGTCCCATATTAAGTGATGAAATATTACATGTATCTAGACACCTTTTGGATATAGATACATCCATATT
TGGGTGAATTTGAGTCACTTAATATGGGAATGAGGGAATGAAAAGGAATTCTTGCTTTGGTTGCTACTTATGCTGCAAAATTGATGTTCGCTCCATATAGTGTCTTGATAGTACCGCATT
GTTGAAATGCCTTCTGCTTCTCACGAAGTATTAATTATTTCCATGTCTAGTATTGCTCTGTTCGCTCCATCATTTGATGATGCCTATATTGTTCCATTATCCTGATGGCTCAAGTTATAA
GAAAGCTCTGCTGTAGTATTGCTTTGTTCGCTCCACTCTGATGACTTTCTTTACTGTCCTCTACTAGGTGTTCTGACCACCTAAGGCAAGTGTTCGGCAAACAGATGGGCTTGAGTGATC
AGGATATTGTTGCCCTCTCTGGTGGTCACACCCTGGTTAGTTTTCCTATTCTTATATGCTTCCGTAATGTACTTTGATCGCTGCGTGATGCACTAATGAAATTTTCTTGGGTTTTAAGGG

GGAAGGTGCCACAAGGAGAGATCTGGCTTTGAGGGACCCTGGACTAGAGAACCTTTGAAGTTTGACAACACTTACTTCACGTAAGTGGGTTGAACTGGCTGTTTTTATTGTTCTTTTCTT
AAACCATGTCTAGTTAAGAACATATTATCCCATTTATTGCTGATTCGATGTCTTTAACGTACTCGTTTTCACAGGGGGAGCTTCTGAGTGGTGACAAAGAGGGCCTTCTTCAGCTTCCTA
GTGACAAAACCCTGCTGAGTGACCCTGTCTTCCGCCCTCTCGTGGAGAAATATGCTGCTGTATGTCTCCTGTTGCTATCTACTAAACCAGGTTGTAGAGATATGTAAAAGTTATACAAAC
TTTTTTATATTCATTGTGGCAGGAGATGAGAAGGCTTTCTTTGAGGACTACAAGGAGGCACACCTCAGGCTGTCCGAACTGGGGTGAGTTGCTGTCGCATTGGTAGTATTCTCATCAGCT
CGAGTGCTCGACTGTATCTAATCATCTGTCCTTGTGAACTGTCATTACAGGTGTATGCTGAAGCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAAGACCTACCCGACCGTGAGCGCTGAGTACCAGGAGGCCGTCGAGAAGGCCAGGCGCAAGCTGCGCGCCCTCATCGCCGAGAAGAGCTGCGCCCCGCTCATGCTCCGCCTCGCG
TGGCACTCCGCTGGGACCTTCGACGTGTCGTCGAAGACCGGCGGCCCGTTCGGTACGATGAAGAAACCGGCCGAGCAGGCGCACGCCGCCAACGCGGGGCTGGACATCGCGGTGCGGATG
CTCGAGCCTATCAAGGAGGAGATCCCCACCATCTCTTACGCCGATCTCTACCAGCTTGCGGGAGTTGTCGCCGTGGAGGTGTCCGGTGGACCTGAGATCCCCTTTCACCCAGGGAGGGAG
GACAAGCCTCAGCCCCCACCTGAGGGTCGCCTTCCTGATGCTACCAAGGGTTCTGACCACCTAAGGCAAGTGTTCGGCAAACAGATGGGCTTGAGTGATCAGGATATTGTTGCCCTCTCT
GGTGGTCACACCCTGGGAAGGTGCCACAAGGAGAGATCTGGCTTTGAGGGACCCTGGACTAGAGAACCTTTGAAGTTTGACAACACTTACTTCACGGAGCTTCTGAGTGGTGACAAAGAG
GGCCTTCTTCAGCTTCCTAGTGACAAAACCCTGCTGAGTGACCCTGTCTTCCGCCCTCTCGTGGAGAAATATGCTGCTGATGAGAAGGCTTTCTTTGAGGACTACAAGGAGGCACACCTC
AGGCTGTCCGAACTGGGGTATGCTGAAGCTTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CCCAGGATCG ACGGCCAGGG GGAGCCCTCG CAGAAGCTTC CCTTCTCCCC TCCCCTGTAC CGGCGGCGTC CTTCTCAGCA TATAAACCCC CGGGGGAGCG TGGCTGCCAT TCGCCCCACA  AGCCTTGCTG TCTTCATCAG TTCTTCCATC CCTCTCCGCC TGATCCGAAG CTTTTACCTC CCAGTAGCAG CCATGGCGAA GACCTACCCG ACCGTGAGCG CTGAGTACCA GGAGGCCGTC  GAGAAGGCCA GGCGCAAGCT GCGCGCCCTC ATCGCCGAGA AGAGCTGCGC CCCGCTCATG CTCCGCCTCG CGTGGCACTC CGCTGGGACC TTCGACGTGT CGTCGAAGAC CGGCGGCCCG  TTCGGTACGA TGAAGAAACC GGCCGAGCAG GCGCACGCCG CCAACGCGGG GCTGGACATC GCGGTGCGGA TGCTCGAGCC TATCAAGGAG GAGATCCCCA CCATCTCTTA CGCCGATCTC  TACCAGCTTG CGGGAGTTGT CGCCGTGGAG GTGTCCGGTG GACCTGAGAT CCCCTTTCAC CCAGGGAGGG AGGACAAGCC TCAGCCCCCA CCTGAGGGTC GCCTTCCTGA TGCTACCAAG  GGTTCTGACC ACCTAAGGCA AGTGTTCGGC AAACAGATGG GCTTGAGTGA TCAGGATATT GTTGCCCTCT CTGGTGGTCA CACCCTGGGA AGGTGCCACA AGGAGAGATC TGGCTTTGAG  GGACCCTGGA CTAGAGAACC TTTGAAGTTT GACAACACTT ACTTCACGGA GCTTCTGAGT GGTGACAAAG AGGGCCTTCT TCAGCTTCCT AGTGACAAAA CCCTGCTGAG TGACCCTGTC  TTCCGCCCTC TCGTGGAGAA ATATGCTGCT GATGAGAAGG CTTTCTTTGA GGACTACAAG GAGGCACACC TCAGGCTGTC CGAACTGGGG TATGCTGAAG CTTAAGTGTA ATCATCTCTG  TAATAAAGTT TGTTGGCCTG AGGGCATCCC TTGTACGCTG TCAGTGGTTT CTGAGCTGTT AAGCTGAATT CAGTTGCCTT GTGCCGCAGA TCTATTGGTG TGACATCCAG TAGTGCTTTT  CAGTGTGTTC TGTGCATGAT CCGTGTTTTA ACTTCTGAAA TGCACTTGAT TTTGCCTCTT TAGCTGGTCG TTTCTTTCAG GATTATCATT TGACTCACTT TGGTTTTGCA CATCTTCATA 
AGTTTGAACC CTATGTTGTT TGGTGACAAG TATGATGGAA TGCCGTAGTG CTTGTGGTTT 

Retrieve as FASTA