View Redoxidase 7853

Entry information : BdiPrx57 (Bradi2g10150)

Entry ID	7853
Creation	2011-01-13 (Toky Ramarohetra)
Last sequence changes	2011-01-13 (Toky Ramarohetra)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2014-01-08 (Qiang Li)

Peroxidase information: BdiPrx57 (Bradi2g10150)

Name (synonym)

BdiPrx57 (Bradi2g10150)

Class

Class III peroxidase [Orthogroup: Prx135]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium

Organism

Brachypodium distachyon [TaxId: 15368 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BdiPrx57 start..stop	S start..stop
HvPrx143	546	0	6..345	4..337
TaPrx19-1B	541	0	6..345	4..338
TaPrx19-1A	541	0	6..345	4..338
TaPrx19-1D	539	0	6..345	4..338

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7853' 'join(8340452..8340721,8341541..8342308)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	8340452..8340721	268	N° 2	8341541..8342308	766
join(8340452..8340721,8341541..8342308)

Literature and cross-references BdiPrx57 (Bradi2g10150)

DNA ref.	Phytozome 12: Bd2 (8340452..8342308)
EST ref.	GenBank: DV471833.1 [Fragment]

Protein sequence: BdiPrx57 (Bradi2g10150)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	345
PWM (Da):	35959.12	Transmb domain:	i13-32o
PI (pH):	8.63

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGRQQQSVCGGAGWWWRAVAWWGAVVLGHLVSHGRAGLLDTNPGLAYNFYRTSCPNAESIVQRVTWAQVAANQALPGRLLRLHFHDCFVKGCDASILLDTAGSEKTAGPNLSVGGYEVID
AVKAQLEQACPGVVSCADVVALAARDAVSYQFKASLWQVETGRRDGPVSSAGNTGSLPSPSAGFGGLVQSFAAKGLDVGDLVALSGAHTIGKASCSSVTPRLYNGNATTVDPLLDSAYAK
RLITSCPNPNLTPASPPPASTVDLDAATPFKFDGTYYSNLLNKQGVLASDAALTQNAAAAAMVANLTNSINFYAAFAMSMKKMGRVDVLTLKNGQGKIRTQCRVP*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 2, intron 1), 2 ESTs. Cultivar="Bd21".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGAGGCAGCAGCAATCAGTGTGCGGAGGAGCAGGGTGGTGGTGGCGAGCAGTGGCGTGGTGGGGGGCCGTGGTCCTCGGCCATTTAGTGAGCCATGGCAGGGCCGGGCTCCTGGAC
ACCAACCCGGGCCTGGCCTATAACTTCTACCGGACGTCGTGCCCCAACGCCGAGTCCATCGTCCAGAGAGTCACCTGGGCGCAGGTCGCCGCCAACCAAGCCCTCCCCGGCAGGCTCCTC
CGCCTCCACTTCCACGACTGCTTCGTCAAGAGGTCTGTCCGTTAAGCTCGCCTTTCAGTTTCTGTCTTTTTCTTGCTATTACGGGTAGTGTCTGGGTGGTGGGCTCTGCTCCAGCTCTTG
CGTTGATTGAACGAACCTTTCCCCTTTCCGTCGGCAACGGTGTTCCAGCCGGCCGACGGGGATGTCTTTCTTCTCCCGGCAAGGAATTAACTACGGGTTCCATTTCTAGCTAGCTACATT
GATGCTCGAATCTTGATAGCCTGCCTCCTCGCCGGTCTAATTAAACTTGCACGGCATACGGGGGTCGCCTTTCTGCTTCCGGTGAAGTGAACTGGAGCAGATTTTTACCGCTTGGGGGAG
GCTAGTTTTTATCGGTGCTCAAGCAGAAACGGATAACATATCTGTCACTCACTCACTCGGTCATCCGTTCACTGAATTGAGAGTCCCTTTATGCGTACGTAAGCATTACGGCACCTTTCC
GCCCGTATCGCGCAAGCTGTACGCGGTAGCGACACACCCAAGCAAGCAAGCAAACAAAACTGAAAAAAAGTAAAGCTAGAGCAGTACAAAGGGGAGCAAAGCGAATCTTGGCATATTTTC
CGTGCGCGGTGCGGCCAATGCTTCGCCGCTCACATGCGCGCCGAGCCGAGCGAGCACTCGCACACCCAGCTGATGGATGGCTGCTCTGCCGCGCCGGTACGGTACGGCGGCCACAGCCCA
CAGCAGCAGCAGCTTTATTAATTTGGCCTCTTGCGCGGGCGGCGATTGCGCCGAAATTTGAAATTTCAAACCCCGAAAAATCTGCTTGCGGTGGTTGGTGGCTGACAGCTGATTGTGTTC
CCGTGCTGCAGGGGTGTGACGCGTCGATCCTGCTGGACACGGCGGGGAGCGAGAAGACGGCGGGGCCGAACCTCTCCGTGGGCGGCTACGAGGTGATCGACGCCGTGAAGGCGCAGCTCG
AGCAAGCCTGCCCGGGCGTCGTCTCCTGCGCCGACGTGGTCGCGCTCGCGGCCCGCGACGCCGTCTCGTACCAGTTCAAGGCGTCTCTCTGGCAGGTGGAAACCGGCCGGAGAGACGGGC
CCGTCTCTTCCGCGGGCAACACGGGCTCCCTCCCTTCCCCGTCCGCGGGCTTCGGGGGCCTCGTGCAGAGCTTCGCCGCCAAGGGGCTCGACGTGGGCGACCTCGTGGCGCTCTCGGGCG
CGCACACCATCGGCAAGGCCAGCTGCTCCAGCGTCACGCCCCGGCTGTACAACGGCAACGCCACCACCGTCGACCCGCTGCTGGATTCCGCCTACGCCAAGAGGCTCATCACCTCGTGCC
CGAACCCGAACCTGACGCCGGCCTCGCCGCCGCCGGCGTCCACGGTGGATTTGGACGCCGCCACGCCGTTCAAGTTCGACGGCACGTACTACAGCAACCTGCTGAACAAGCAGGGGGTGC
TCGCCTCTGACGCCGCGCTCACGCAGAACGCCGCCGCGGCCGCCATGGTCGCCAACCTCACCAACTCCATCAATTTCTACGCCGCCTTCGCCATGTCCATGAAGAAGATGGGCCGCGTCG
ACGTGCTCACCCTCAAGAACGGACAGGGGAAGATCAGGACGCAGTGCCGTGTGCCGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTACTGT CATCACAAAA CACAAACACA GAGCATCCTC CTTGGCTCCT TCTCTCTCAC TCACTCCCTC GGTTCCCCAT CCCGGCTTCT CTGAAGACCG GTGCTGCTCT GAAACTGGAG AGTTAAGAAG AGAGAGAGAG ATGGGGAGGC AGCAGCAATC AGTGTGCGGA GGAGCAGGGT GGTGGTGGCG AGCAGTGGCG TGGTGGGGGG CCGTGGTCCT CGGCCATTTA GTGAGCCATG GCAGGGCCGG GCTCCTGGAC ACCAACCCGG GCCTGGCCTA TAACTTCTAC CGGACGTCGT GCCCCAACGC CGAGTCCATC GTCCAGAGAG TCACCTGGGC GCAGGTCGCC GCCAACCAAG CCCTCCCCGG CAGGCTCCTC CGCCTCCACT TCCACGACTG CTTCGTCAAG GGGTGTGACG CGTCGATCCT GCTGGACACG GCGGGGAGCG AGAAGACGGC GGGGCCGAAC CTCTCCGTGG GCGGCTACGA GGTGATCGAC GCCGTGAAGG CGCAGCTCGA GCAAGCCTGC CCGGGCGTCG TCTCCTGCGC CGACGTGGTC GCGCTCGCGG CCCGCGACGC CGTCTCGTAC CAGTTCAAGG CGTCTCTCTG GCAGGTGGAA ACCGGCCGGA GAGACGGGCC CGTCTCTTCC GCGGGCAACA CGGGCTCCCT CCCTTCCCCG TCCGCGGGCT TCGGGGGCCT CGTGCAGAGC TTCGCCGCCA AGGGGCTCGA CGTGGGCGAC CTCGTGGCGC TCTCGGGCGC GCACACCATC GGCAAGGCCA GCTGCTCCAG CGTCACGCCC CGGCTGTACA ACGGCAACGC CACCACCGTC GACCCGCTGC TGGATTCCGC CTACGCCAAG AGGCTCATCA CCTCGTGCCC GAACCCGAAC CTGACGCCGG CCTCGCCGCC GCCGGCGTCC ACGGTGGATT TGGACGCCGC CACGCCGTTC AAGTTCGACG GCACGTACTA CAGCAACCTG CTGAACAAGC AGGGGGTGCT CGCCTCTGAC GCCGCGCTCA CGCAGAACGC CGCCGCGGCC GCCATGGTCG CCAACCTCAC CAACTCCATC AATTTCTACG CCGCCTTCGC CATGTCCATG AAGAAGATGG GCCGCGTCGA CGTGCTCACC CTCAAGAACG GACAGGGGAA GATCAGGACG CAGTGCCGTG TGCCGTGATA GTCACAGATT CTTTTTTTTT CTTGGCGCTC GTTTTTTTTT CCTTCTCTCT CTTCTTGTTC CGGGCGCGGA TCAAATATAT TGTGCGCCGT GATTAAGTTC CCAATATATC TTATATTGGT TTTGTTGAGT CCGAGCTGTA
ATACTGTCCA CCGATGGCTT CCGTTGCATA CCTCTTGCAG

Retrieve as FASTA