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Entry information : BdiPrx68 (Bradi2g13190)
Entry ID 7858
Creation 2011-01-13 (Toky Ramarohetra)
Last sequence changes 2011-01-13 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-29 (Qiang Li)
Peroxidase information: BdiPrx68 (Bradi2g13190)
Name (synonym) BdiPrx68 (Bradi2g13190)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx68
start..stop		 S start..stop
TaPrx05-1A 611 0 5..338 2..333
TaPrx05-1B 587 0 33..338 28..333
TaPrx05-1D 581 0 33..338 38..343
OsPrx1617 560 0 4..338 7..342
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7858' 'complement(join(11624004..11624306,11624429..11624553,11627537..11627891,11627991..11628224))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 11627991..11628224 232 N° 2 11627537..11627891 353 N° 3 11624429..11624553 123 N° 4 11624004..11624306 301
complement(join(11624004..11624306,11624429..11624553,11627537..11627891,1162799 1..11628224))


exon

Literature and cross-references BdiPrx68 (Bradi2g13190)
DNA ref. Phytozome 12:   Bd2 (11628224..11624004)
Protein sequence: BdiPrx68 (Bradi2g13190)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338 (316)
PWM (Da):   %s   35921.14 (33782.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.93 (7.31) Peptide Signal:   %s   cut: 29 range:23-338
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKGNKQLGCLVAVAVLVLSAGSLDTAAAQAAGLKKGFYKKSCPQA
EDIAQKVVWNRVAGNRELAAKFLRMFFHDCFVRGCDASVLLDSPTRTAEKDSAPNLSLAGFEVIDEVKAALERACPGVVSCADIVALAARDSVSFQYGKKLWEVETGRRDGSISSDQQALDEIPAPSSTFDVLASNFSSKGLGVQDLVVLSGG
HTIGIGNCNLVSSRIFNFTGKNNPSDIDPSLNPPYAKFLQGQCRRNQADPNDNTTVVPMDTGSSTSFDSHYFVNLKAGQGLFTSDATLVTNARAASLVDKLQDNGVFLDHFKNSIKRMGQ
IGVLTGANGQIRNRCNVVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, introns 1, 3 and 3'). No ESTs. Containing IntR (3').
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGGGTAATAAGCAGCTGGGATGCCTGGTTGCCGTGGCAGTATTGGTCTTGTCCGCCGGAAGCCTGGACACTGCGGCAGCGCAGGCGGCCGGGCTGAAGAAGGGGTTCTACAAGAAG
AGCTGCCCTCAGGCGGAGGACATCGCGCAGAAGGTGGTGTGGAACCGCGTCGCCGGCAACCGCGAGCTCGCCGCCAAGTTCCTCCGCATGTTCTTCCATGACTGCTTCGTCAGGGTACGT
ATACAATGCTAATCTCAAGTCAAAATATATCGCCGATTCATAATAAGTGTGTCTCAGACTGTTGCTTTTGTTACGCGCGGCTTAATGTGGCAGGGGGGTGTGACGCGTCGGTGCTTCTGG
ACTCGCCGACGAGGACGGCGGAGAAGGACTCGGCGCCGAACCTGTCGCTGGCGGGGTTCGAGGTGATCGACGAGGTGAAGGCGGCGCTGGAGCGGGCGTGCCCGGGCGTCGTCTCCTGCG
CCGACATCGTCGCGCTCGCCGCACGGGACTCCGTGTCTTTCCAGTACGGCAAGAAGCTGTGGGAGGTGGAGACCGGACGCCGCGACGGCTCGATCTCGAGCGACCAGCAGGCGCTGGACG
AGATCCCGGCGCCGTCCTCCACCTTCGACGTCCTCGCCTCCAACTTCTCCAGCAAGGGCCTCGGCGTCCAGGACCTCGTCGTCCTCTCAGGTACGTATACTCCGTCAACCCACACTTCAT
TGTACTGTCTAGCTAGCTAATTTTGCAGTTGATGCATGCTTGCCGCTTGCGCTAATTTAATTTGCTCCTTTAGTGTGTGTGGCGCTAGCTTAGCGTTTGTCGGTACGCTGTGAGTGTGGA
CCACGGTCGTTGTGGTTACTGCTGAATCGTAGAGAAACAACGAAAGGAACAACGCCGCGTGGGCGCCGTGGGACGAGCCACGCGCAGCGCACGTCGGTCCCTGCGTTTGATAGGTTGCAG
CAGGAATTTTACGCTGTAGCGCTGTCCATTGCTACCATACGGTGTGTTAAATGTGGCATGGCAGACCACAGAGACATAATGGGCGAGCGCCCAGCAGTTACCAACCTGCAAACCAAGAAC
TCAAACTAACTATGTCAAAATTACAAATGGGAAATGACAAATTTTTGTTACGGTGAAATTATGACAAACGTTTTTTCCACTCTATTTTGTTGATATAGAATGCCCATCCTAAGTCTTCTA
CATGCTAGGTCATAGAATCCTATACATCGTAAAAATAAATCATACGTCCTCCGTATGATTTAGGAACGGAGGGAGTACATAAAAGGATTCTACGTATGTATCGCAACGCTGAATACTCTG
TTCTCAGATGCCGGGCGTTGCTTAATTTAGACCTTGCACCTATGCACCGGAGCACGTTATATGAAGAGCCTTGTACAAAACAGTGGTCAGTACGAGAGTCTTATGTGCATTTGCGTTGGC
GAACGTTTTTAGACTTGAGTATCACTAGTACGCACTACGTAACTGAAACTGTGCTCGTACAAACCAGAACGCAGATATGTATGTACTCCTTTCATTACTAAATACTCGTCGTTACACTAA
AACAACGAAAAGTATTTAGAAATAGAGGGAGTACTTGCAACACATGCACGTCACGTACAGTTGCATGAAACATGTCAACTTAAGTCTCATCTGAAAGTGGTGCGACTGTCGGTGACCGAT
TCGTTTACCCCCGCTAACTACCTCTTTGATACTCGTGTTCTAGTCTAGGTAACGTAGCTCTCCGATCAAACCCAACTGATTGGTTGCAACTGCATGCAGGACACGTTAGCTTGCCTCTTG
TCATCATAAACTACGGATTCCTCCTTTATGATGATAGATATGTATTTCTGAACCGGCTGATTTGATTGCAACTGTAAGGCACGTTAGCTTGCCTCTTGCATTTAGGGCTATTCGTTGACA
AGCAGAGGTTGTACAGCTGCTGAATAATGCGACCGTTGGAGCAAATGCGATATGACTGATAAGTACATAGAAGGTTAATGCAAAATTCTTTTACAGAAGATTAAAAAAAGAACATAAAGT
GAAATCCCGCATGCATTTAAAACATACAGCGTTGAACAACCAAGTTGTTGGCAGGGCGGACCTAATTGAAGCAGCGTAAATTTTACTACTATTGATATCATATCCTCTTGTACTTTTAGC
AAAATAATATTCTCTCCGTCCAACAAAACATGTCTCAAGTTTGTTAATATTTGAATGTATCTAAACATGATTTAGTGAATAGATGTATTTAAATTTAGTTAAAGTTAAGACATCTTTTGT
CGAATCGAGGAGTACTGAATTTTCTATCATGTGAAAGACTAGGCTTTGAATATATATGTCTATCATGTGAAGTGCGGTGTCCTCTATCATAGGACAGTTGGGGCCGGCAATTCTATCTCG
GTTAGAAATACAACTTTTCCACGACTTTCCATCTTCCGAACTTCTATCCGATGGCTCAGGAAGAGGAAGGTCACGTGTTGGGACACAAGGAGAAAGCAAAGTGAAGAAAACAGGACCAAA
CTCTGCTTAACTGGTTGAAATTAATGATCTGAAAACGACAGAGTTCCCTACTTGAAAAAGGACAAAAAAGGGCAACCGTTCCTACACTAGGAGGTTGCTGCGCTAGTTAGTACGGACTAC
GCAGAGAGCCCGTGTCGGCATGAACCATTACGACGGAGTGCCGGAGTGGTGGCCTATGAACATAGCAATGTATAGCACAGGTGTGTTTGTACAGCACATTTAATTTGCTTTCACCCACTC
GGAGCCGTGAAAAGAAAAGAGTGAATTCCATTTTTGACCTCAAGTTTTGATTTTTTGACAGCTTTGACCCGTTTAGTGGAATTTTCGTTTTTTTATCCCATTTAGCCGAACTTGTGCCAC
CAATGATCTCATTTAAGACTTTTGTCCAAATCCCGTCCCGCTGACGATCCCCTGCGATCTCAGGATCGACTACTTTGATGGAGTACTCCAGCTCGAACTTGGTCTCACGACTCTCAACTC
GCCAGCCCACTGAGTGCTCAAGCCGCAGGCGGTGGAGTACTGTGGTGTCACCGCTGCTCTACTCCTCCTGCTGTTCCTCGCCGGCGGCGTTCGCGGTGTTCGTGCTGGTGGTGTGGGCGG
TGGTGCTCACGGCCAACTCATTCTTGCTTTTCGTGAGGCGTCAGCTCCTTTGCGCCGTACATCGCCAGGATGTCCCTCGTGTCCCCGCCGCTGACGGGGGTTCTATTCCTCTTCTATGGC
TTGTTGTGTGCTGCTGCCGCTAGCTAGCTGCTGCCTGCGTGTTGTGCCGCTATGCTGCTGCTGCCTGCTTGTGGTGCCGCCACTGCTGCTTGGCGAAGGAGCAGAGGCGGGCAAGCCGAG
CCGGCTGCAGAGGCTCCTCTGCTCTTCGGGCCAAGCTAGGCCGGCAGCCAGCTCATGGTGAGCTTTGCCTGAATCCACCCTGACCTGTTAGGACGGAAGAGATTTGGGCAAAACTCTTAC
ATGGGGTCAACGGTGGCACAAGTTCCGCTAAATGTGGTAAAAAAAAGGAAAATTTCACTAACTGGGGTCAAAGCTGTAAAAAAAATGAAACTTGAGTGTCAAAAATGGAATCCACTCATA
AGAAAAAGACAGAAAAAGACCGCTTAACTGAATTGAACCTTTTTTGGACATGTCATGTGCAAACACACTGCAGGCGCGGACATACCATCGGAATAGGAAACTGCAACCTCGTCAGCTCCA
GGATCTTCAACTTCACCGGCAAAAACAACCCCAGCGACATCGATCCTTCCCTCAACCCACCCTACGCCAAGTTCCTCCAGGTACCTATATATCTCTCTTCAGTCAGCATTCCTTAATCTT
GTCATAATAATGGATGGAATAATACTCAGCGGCGGGGTGCCTAATCGTATTAGTATACGGATATGGGATTGTGCGCGCGCAGGGGGGCAGTGCAGGCGTAACCAGGCGGACCCGAACGAC
AACACGACGGTGGTGCCCATGGACACCGGCAGCAGCACCTCCTTCGACAGCCACTACTTCGTCAACCTTAAAGCCGGGCAGGGGCTCTTCACCTCCGACGCCACGCTGGTCACCAACGCC
CGCGCAGCCTCCCTCGTCGACAAGCTGCAGGACAATGGCGTCTTCCTCGACCACTTCAAGAACTCCATCAAGCGCATGGGCCAGATCGGGGTGCTCACCGGCGCCAATGGCCAGATCAGG
AACAGATGCAACGTCGTCAACTCCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGGGTAATAAGCAGCTGGGATGCCTGGTTGCCGTGGCAGTATTGGTCTTGTCCGCCGGAAGCCTGGACACTGCGGCAGCGCAGGCGGCCGGGCTGAAGAAGGGGTTCTACAAGAAG
AGCTGCCCTCAGGCGGAGGACATCGCGCAGAAGGTGGTGTGGAACCGCGTCGCCGGCAACCGCGAGCTCGCCGCCAAGTTCCTCCGCATGTTCTTCCATGACTGCTTCGTCAGGGGGTGT
GACGCGTCGGTGCTTCTGGACTCGCCGACGAGGACGGCGGAGAAGGACTCGGCGCCGAACCTGTCGCTGGCGGGGTTCGAGGTGATCGACGAGGTGAAGGCGGCGCTGGAGCGGGCGTGC
CCGGGCGTCGTCTCCTGCGCCGACATCGTCGCGCTCGCCGCACGGGACTCCGTGTCTTTCCAGTACGGCAAGAAGCTGTGGGAGGTGGAGACCGGACGCCGCGACGGCTCGATCTCGAGC
GACCAGCAGGCGCTGGACGAGATCCCGGCGCCGTCCTCCACCTTCGACGTCCTCGCCTCCAACTTCTCCAGCAAGGGCCTCGGCGTCCAGGACCTCGTCGTCCTCTCAGGCGGACATACC
ATCGGAATAGGAAACTGCAACCTCGTCAGCTCCAGGATCTTCAACTTCACCGGCAAAAACAACCCCAGCGACATCGATCCTTCCCTCAACCCACCCTACGCCAAGTTCCTCCAGGGGCAG
TGCAGGCGTAACCAGGCGGACCCGAACGACAACACGACGGTGGTGCCCATGGACACCGGCAGCAGCACCTCCTTCGACAGCCACTACTTCGTCAACCTTAAAGCCGGGCAGGGGCTCTTC
ACCTCCGACGCCACGCTGGTCACCAACGCCCGCGCAGCCTCCCTCGTCGACAAGCTGCAGGACAATGGCGTCTTCCTCGACCACTTCAAGAACTCCATCAAGCGCATGGGCCAGATCGGG
GTGCTCACCGGCGCCAATGGCCAGATCAGGAACAGATGCAACGTCGTCAACTCCTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGGGTA ATAAGCAGCT GGGATGCCTG GTTGCCGTGG CAGTATTGGT CTTGTCCGCC GGAAGCCTGG ACACTGCGGC AGCGCAGGCG GCCGGGCTGA AGAAGGGGTT CTACAAGAAG  AGCTGCCCTC AGGCGGAGGA CATCGCGCAG AAGGTGGTGT GGAACCGCGT CGCCGGCAAC CGCGAGCTCG CCGCCAAGTT CCTCCGCATG TTCTTCCATG ACTGCTTCGT CAGGGGGTGT  GACGCGTCGG TGCTTCTGGA CTCGCCGACG AGGACGGCGG AGAAGGACTC GGCGCCGAAC CTGTCGCTGG CGGGGTTCGA GGTGATCGAC GAGGTGAAGG CGGCGCTGGA GCGGGCGTGC  CCGGGCGTCG TCTCCTGCGC CGACATCGTC GCGCTCGCCG CACGGGACTC CGTGTCTTTC CAGTACGGCA AGAAGCTGTG GGAGGTGGAG ACCGGACGCC GCGACGGCTC GATCTCGAGC  GACCAGCAGG CGCTGGACGA GATCCCGGCG CCGTCCTCCA CCTTCGACGT CCTCGCCTCC AACTTCTCCA GCAAGGGCCT CGGCGTCCAG GACCTCGTCG TCCTCTCAGG CGGACATACC  ATCGGAATAG GAAACTGCAA CCTCGTCAGC TCCAGGATCT TCAACTTCAC CGGCAAAAAC AACCCCAGCG ACATCGATCC TTCCCTCAAC CCACCCTACG CCAAGTTCCT CCAGGGGCAG  TGCAGGCGTA ACCAGGCGGA CCCGAACGAC AACACGACGG TGGTGCCCAT GGACACCGGC AGCAGCACCT CCTTCGACAG CCACTACTTC GTCAACCTTA AAGCCGGGCA GGGGCTCTTC  ACCTCCGACG CCACGCTGGT CACCAACGCC CGCGCAGCCT CCCTCGTCGA CAAGCTGCAG GACAATGGCG TCTTCCTCGA CCACTTCAAG AACTCCATCA AGCGCATGGG CCAGATCGGG 
GTGCTCACCG GCGCCAATGG CCAGATCAGG AACAGATGCA ACGTCGTCAA CTCCTAA 

Retrieve as FASTA