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Entry information : BdiPrx70 (Bradi2g20820)
Entry ID 7860
Creation 2011-01-13 (Toky Ramarohetra)
Last sequence changes 2011-01-13 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx70 (Bradi2g20820)
Name (synonym) BdiPrx70 (Bradi2g20820)
Class Class III peroxidase    [Orthogroup: Prx160]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx70
start..stop		 S start..stop
TaPrx80-1D 518 0 30..341 26..335
TaPrx80-1A 515 0 30..341 28..337
TaPrx80-1B 509 0 36..341 29..332
SbPrx127 491 3.19e-176 5..341 10..347
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 18269013..18269255 241 N° 2 18268726..18268911 184 N° 3 18268469..18268634 164 N° 4 18267922..18268352 429
complement(join(18267922..18268352,18268469..18268634,18268726..18268911,1826901 3..18269255))


exon

Literature and cross-references BdiPrx70 (Bradi2g20820)
DNA ref. Phytozome 12:   Bd2 (18269255..18267922)
Protein sequence: BdiPrx70 (Bradi2g20820)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341 (314)
PWM (Da):   %s   36710.27 (33882.6)  
PI (pH):   %s   6.77 (5.83) Peptide Signal:   %s   cut: 28 range:28-341
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSRKPRLLLVACLVLLIGAALPKGSRAEEPGGAAGLRFGFYNATC
PAAEDVVFAEMHAILREDPTLAPSLLRMHYHDCFVQGCDGSIMLRSRSGTAERDATPNRSMRGYGAIERIKARLESVCPLTVSCADIIAMAARDAVYLSKGPWYAVETGRRDGNETLAEYAETDLAPPDSNIVDVKTFFSVKSLNSKDIAVLFGCH
SIGTSHCEAFEKRLYNFSADTEQDPSLDAVYAAKLKKLCPRGALHAHGGWATKVPMDPGSGFTFGLSYYRHVVAGRGLFQSDGGLLHDPATKVYVDRMAAASSPDEYFEDFAAAMVKMGR
TDVLLGCLGEVRATCGIFVD

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 3 introns). No ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAGGAAGCCGCGGCTTCTCCTGGTGGCCTGCCTGGTGCTGCTGATCGGTGCGGCCCTGCCGAAGGGTTCGCGTGCGGAGGAGCCAGGCGGCGCCGCCGGGCTGCGGTTCGGGTTC
TACAATGCGACGTGCCCGGCCGCGGAGGACGTCGTGTTCGCGGAGATGCACGCCATCCTCCGCGAGGACCCCACGCTCGCGCCCTCCCTGCTCCGGATGCACTACCACGACTGCTTCGTC
CAGGTTTAACCCAGATCGAGATCGAATGCCTTATTTCAGCGTGTTTGGTTTGGGCGGCCAAGCCTTAATTAGATCGTGCGTGGTGGGGTGTTAATTGAGATCAGGGGGATGCGACGGATC
GATCATGCTGAGGTCGAGGAGCGGGACGGCGGAGAGGGACGCGACGCCGAACCGGAGCATGCGCGGGTACGGCGCGATCGAGAGGATCAAGGCGAGGCTGGAGTCGGTCTGCCCGCTCAC
CGTCTCCTGTGCCGACATCATAGCCATGGCCGCCAGAGACGCCGTCTACCTGGTAAAAAGGAAAATTCACAATCGAGACCATCCCTCTCAAGCTGCTAGCTAAATTTGCTGACTGATTCG
GCCGGCTGCTTTTCTGTTTGCAGAGAGCAAAGGGCCGTGGTACGCCGTGGAGACCGGGAGGCGGGACGGCAACGAGACCCTGGCCGAGTACGCCGAGACCGACCTGGCGCCGCCGGACTC
CAACATCGTCGACGTCAAGACCTTCTTCAGCGTCAAGTCCCTCAACTCCAAGGACATCGCCGTCCTCTTCGGTATAACTCTACCTACCTTACCTTCGCGCCCACTCCCCACACCTTAATT
TCCTTTTGCTTCGATCTCCGCGTGAACGAACGACAACAACAGCTTAACAGCCTTGGTTTCTCGTCAGGGGGTGCCACAGCATCGGGACATCGCACTGCGAGGCGTTCGAGAAGCGGCTGT
ACAACTTCAGCGCCGACACGGAGCAGGACCCGTCGCTGGACGCCGTCTACGCGGCCAAGCTCAAGAAGCTCTGCCCGCGCGGCGCTCTGCACGCCCACGGCGGCTGGGCGACCAAGGTGC
CCATGGACCCCGGCAGCGGCTTCACCTTCGGCCTGAGCTACTACCGCCACGTGGTCGCCGGGAGGGGCCTCTTCCAGTCCGACGGCGGCCTCCTCCACGACCCCGCCACCAAAGTCTACG
TCGACAGGATGGCCGCCGCGTCATCGCCCGACGAGTATTTCGAGGACTTCGCGGCGGCCATGGTCAAGATGGGACGCACCGACGTGCTCCTCGGCTGTCTCGGCGAGGTTAGGGCCACCT
GTGGCATTTTTGTGGACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAGGAAGCCGCGGCTTCTCCTGGTGGCCTGCCTGGTGCTGCTGATCGGTGCGGCCCTGCCGAAGGGTTCGCGTGCGGAGGAGCCAGGCGGCGCCGCCGGGCTGCGGTTCGGGTTC
TACAATGCGACGTGCCCGGCCGCGGAGGACGTCGTGTTCGCGGAGATGCACGCCATCCTCCGCGAGGACCCCACGCTCGCGCCCTCCCTGCTCCGGATGCACTACCACGACTGCTTCGTC
CAGGGATGCGACGGATCGATCATGCTGAGGTCGAGGAGCGGGACGGCGGAGAGGGACGCGACGCCGAACCGGAGCATGCGCGGGTACGGCGCGATCGAGAGGATCAAGGCGAGGCTGGAG
TCGGTCTGCCCGCTCACCGTCTCCTGTGCCGACATCATAGCCATGGCCGCCAGAGACGCCGTCTACCTGAGCAAAGGGCCGTGGTACGCCGTGGAGACCGGGAGGCGGGACGGCAACGAG
ACCCTGGCCGAGTACGCCGAGACCGACCTGGCGCCGCCGGACTCCAACATCGTCGACGTCAAGACCTTCTTCAGCGTCAAGTCCCTCAACTCCAAGGACATCGCCGTCCTCTTCGGGTGC
CACAGCATCGGGACATCGCACTGCGAGGCGTTCGAGAAGCGGCTGTACAACTTCAGCGCCGACACGGAGCAGGACCCGTCGCTGGACGCCGTCTACGCGGCCAAGCTCAAGAAGCTCTGC
CCGCGCGGCGCTCTGCACGCCCACGGCGGCTGGGCGACCAAGGTGCCCATGGACCCCGGCAGCGGCTTCACCTTCGGCCTGAGCTACTACCGCCACGTGGTCGCCGGGAGGGGCCTCTTC
CAGTCCGACGGCGGCCTCCTCCACGACCCCGCCACCAAAGTCTACGTCGACAGGATGGCCGCCGCGTCATCGCCCGACGAGTATTTCGAGGACTTCGCGGCGGCCATGGTCAAGATGGGA
CGCACCGACGTGCTCCTCGGCTGTCTCGGCGAGGTTAGGGCCACCTGTGGCATTTTTGTGGACTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAGGA AGCCGCGGCT TCTCCTGGTG GCCTGCCTGG TGCTGCTGAT CGGTGCGGCC CTGCCGAAGG GTTCGCGTGC GGAGGAGCCA GGCGGCGCCG CCGGGCTGCG GTTCGGGTTC  TACAATGCGA CGTGCCCGGC CGCGGAGGAC GTCGTGTTCG CGGAGATGCA CGCCATCCTC CGCGAGGACC CCACGCTCGC GCCCTCCCTG CTCCGGATGC ACTACCACGA CTGCTTCGTC  CAGGGATGCG ACGGATCGAT CATGCTGAGG TCGAGGAGCG GGACGGCGGA GAGGGACGCG ACGCCGAACC GGAGCATGCG CGGGTACGGC GCGATCGAGA GGATCAAGGC GAGGCTGGAG  TCGGTCTGCC CGCTCACCGT CTCCTGTGCC GACATCATAG CCATGGCCGC CAGAGACGCC GTCTACCTGA GCAAAGGGCC GTGGTACGCC GTGGAGACCG GGAGGCGGGA CGGCAACGAG  ACCCTGGCCG AGTACGCCGA GACCGACCTG GCGCCGCCGG ACTCCAACAT CGTCGACGTC AAGACCTTCT TCAGCGTCAA GTCCCTCAAC TCCAAGGACA TCGCCGTCCT CTTCGGGTGC  CACAGCATCG GGACATCGCA CTGCGAGGCG TTCGAGAAGC GGCTGTACAA CTTCAGCGCC GACACGGAGC AGGACCCGTC GCTGGACGCC GTCTACGCGG CCAAGCTCAA GAAGCTCTGC  CCGCGCGGCG CTCTGCACGC CCACGGCGGC TGGGCGACCA AGGTGCCCAT GGACCCCGGC AGCGGCTTCA CCTTCGGCCT GAGCTACTAC CGCCACGTGG TCGCCGGGAG GGGCCTCTTC  CAGTCCGACG GCGGCCTCCT CCACGACCCC GCCACCAAAG TCTACGTCGA CAGGATGGCC GCCGCGTCAT CGCCCGACGA GTATTTCGAG GACTTCGCGG CGGCCATGGT CAAGATGGGA  CGCACCGACG TGCTCCTCGG CTGTCTCGGC GAGGTTAGGG CCACCTGTGG CATTTTTGTG GACTAACTAG CTAGAGGTCC AGGGTTGTAC ATATACACAT ACATGCACTG GTTGATCTGT  ATGGATCGGT GTTTATACGT GTCCTGGTAT TTTTGGTTCA GAACTTCAGA TTGAGCAAAA ATGCAAAACA GACTGGAAGT AACTTGTGCA CCTTTGCTGA GGAGATCATC AGTTTCACTT 
GAAAAACAAG TGGTGTCCTT GCTACGCATG ACCATCGTTG ACCACGAATC ATGCATGCAT GGGTTATTTC TTTGGTAGTT TAACCAACCA T 

Retrieve as FASTA