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Entry information : BdiPrx78 (Bradi2g37040)
Entry ID 7866
Creation 2011-01-13 (Toky Ramarohetra)
Last sequence changes 2011-01-13 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx78 (Bradi2g37040)
Name (synonym) BdiPrx78 (Bradi2g37040)
Class Class III peroxidase    [Orthogroup: Prx156]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx78
start..stop		 S start..stop
TaPrx225-1B 508 0 15..342 14..338
TaPrx225-1D 504 0 15..342 16..340
TaPrx225-1A 499 1.6e-179 41..342 34..338
OsPrx69 471 1.23e-168 8..342 8..332
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7866' 'join(37438809..37439078,37439184..37439942)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 37438809..37439078 268 N° 2 37439184..37439942 757  
join(37438809..37439078,37439184..37439942)


exon

Literature and cross-references BdiPrx78 (Bradi2g37040)
Literature Hayden,D.M., Donze,T.J., Vivian,L.A., Stamova,B. and Coleman-Derr,D.
EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon.
Theor Appl Genet 113 (2), 186-195 (2006).
DNA ref. Phytozome 12:   Bd2 (37438809..37439942)
Protein sequence: BdiPrx78 (Bradi2g37040)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (307)
PWM (Da):   %s   36456.46 (32922.7) Transmb domain:   %s   i13-35o
PI (pH):   %s   8.79 (8.91) Peptide Signal:   %s   cut: 36 range:36-342
Sequence
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Send to Peroxiscan
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MDSRGGVGDARRVSSVLNAMVLLAWACSFLGGADAQAQAQAQAKL
DVGYYNGSCPDAEDLVTTIVHASIRMDPGNGPGLIRLFFHDCFVRGCDASVLLDDPTGNSTAEKDAPPNFPSLRGFGVIDRAKRVVERRCPGTVSCADILAFAARDASRIMGGVKYSVPAGRLDGRVSRSAEALNNLPPASSNITRLVSLFKSKNLTADDMVTLS
GAHSIGRSHCSSFTSRLYPRIDATLNVTLGKALRAGKCPAATGRLDRVVQLDHVTPLMLDTQYYVNVGNHEVLFGSDQALTDRTDTARLVAAYAGNRKLWSRRFGEAMVQMGYADVLTGP
PGEIRKVCSRVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 1 intron). 1 EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTCCAGAGGCGGCGTCGGCGATGCTCGTCGTGTCAGCTCAGTGCTGAATGCCATGGTCCTGCTCGCGTGGGCTTGCTCCTTCTTGGGCGGCGCCGACGCCCAGGCCCAGGCCCAG
GCCCAAGCAAAGCTGGATGTCGGCTACTACAACGGCAGCTGCCCGGACGCCGAGGACCTGGTCACCACGATCGTCCACGCCTCCATCCGCATGGACCCCGGCAACGGGCCCGGCCTCATC
CGCCTCTTCTTCCACGACTGCTTCGTCAGGGGGTACATTACATTACACACACACACACACACACGCCATTATTGTTAATTTGAGTAACTCCTCAAGTTTCCATTGCTAAGTAGTGCTAAC
TCGATCTTTGATTCCAGGGCTGCGACGCGTCGGTGCTGCTGGACGACCCGACGGGGAACTCGACGGCGGAGAAAGACGCGCCGCCAAACTTCCCCTCCCTACGAGGCTTCGGCGTGATCG
ACCGCGCGAAGCGCGTGGTGGAGCGCCGGTGCCCGGGGACCGTCTCCTGCGCCGACATCCTCGCCTTCGCGGCACGTGACGCGTCGCGCATAATGGGGGGCGTCAAGTACTCCGTCCCCG
CGGGACGGCTCGACGGCCGGGTCTCCCGGTCCGCCGAAGCGCTCAACAACCTCCCACCCGCGAGCTCCAACATCACGCGGCTCGTCTCCCTCTTCAAGTCCAAGAACCTGACCGCCGACG
ACATGGTCACGCTGTCCGGGGCGCACTCCATCGGCCGATCCCACTGCTCCTCCTTCACCTCGCGCCTCTACCCGAGGATCGACGCCACGCTGAATGTCACTCTGGGGAAAGCTCTTCGTG
CCGGGAAGTGCCCGGCGGCGACGGGGAGGCTGGATAGAGTGGTTCAGTTGGACCATGTCACGCCGTTGATGCTGGACACGCAGTATTATGTCAATGTGGGGAACCATGAGGTGCTCTTCG
GGTCCGACCAGGCGCTGACGGACAGGACCGACACGGCGAGGCTCGTCGCGGCGTACGCCGGCAACCGGAAGCTCTGGTCGCGGCGGTTCGGGGAGGCCATGGTGCAGATGGGCTACGCCG
ACGTGCTCACCGGACCGCCAGGGGAGATCAGGAAAGTCTGCAGCAGAGTCAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTCCAGAGGCGGCGTCGGCGATGCTCGTCGTGTCAGCTCAGTGCTGAATGCCATGGTCCTGCTCGCGTGGGCTTGCTCCTTCTTGGGCGGCGCCGACGCCCAGGCCCAGGCCCAG
GCCCAAGCAAAGCTGGATGTCGGCTACTACAACGGCAGCTGCCCGGACGCCGAGGACCTGGTCACCACGATCGTCCACGCCTCCATCCGCATGGACCCCGGCAACGGGCCCGGCCTCATC
CGCCTCTTCTTCCACGACTGCTTCGTCAGGGGCTGCGACGCGTCGGTGCTGCTGGACGACCCGACGGGGAACTCGACGGCGGAGAAAGACGCGCCGCCAAACTTCCCCTCCCTACGAGGC
TTCGGCGTGATCGACCGCGCGAAGCGCGTGGTGGAGCGCCGGTGCCCGGGGACCGTCTCCTGCGCCGACATCCTCGCCTTCGCGGCACGTGACGCGTCGCGCATAATGGGGGGCGTCAAG
TACTCCGTCCCCGCGGGACGGCTCGACGGCCGGGTCTCCCGGTCCGCCGAAGCGCTCAACAACCTCCCACCCGCGAGCTCCAACATCACGCGGCTCGTCTCCCTCTTCAAGTCCAAGAAC
CTGACCGCCGACGACATGGTCACGCTGTCCGGGGCGCACTCCATCGGCCGATCCCACTGCTCCTCCTTCACCTCGCGCCTCTACCCGAGGATCGACGCCACGCTGAATGTCACTCTGGGG
AAAGCTCTTCGTGCCGGGAAGTGCCCGGCGGCGACGGGGAGGCTGGATAGAGTGGTTCAGTTGGACCATGTCACGCCGTTGATGCTGGACACGCAGTATTATGTCAATGTGGGGAACCAT
GAGGTGCTCTTCGGGTCCGACCAGGCGCTGACGGACAGGACCGACACGGCGAGGCTCGTCGCGGCGTACGCCGGCAACCGGAAGCTCTGGTCGCGGCGGTTCGGGGAGGCCATGGTGCAG
ATGGGCTACGCCGACGTGCTCACCGGACCGCCAGGGGAGATCAGGAAAGTCTGCAGCAGAGTCAACTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATATATCCTC TGCACAGACC CAGAGGCCGG TAGCACTAAC TTCCACAATC CATCCATATC TAGCTCTCTA ACTAGCTCTA ACTAGCTAGC TTGGTCCGCC GGAGATGGAT TCCAGAGGCG  GCGTCGGCGA TGCTCGTCGT GTCAGCTCAG TGCTGAATGC CATGGTCCTG CTCGCGTGGG CTTGCTCCTT CTTGGGCGGC GCCGACGCCC AGGCCCAGGC CCAGGCCCAA GCAAAGCTGG  ATGTCGGCTA CTACAACGGC AGCTGCCCGG ACGCCGAGGA CCTGGTCACC ACGATCGTCC ACGCCTCCAT CCGCATGGAC CCCGGCAACG GGCCCGGCCT CATCCGCCTC TTCTTCCACG  ACTGCTTCGT CAGGGGCTGC GACGCGTCGG TGCTGCTGGA CGACCCGACG GGGAACTCGA CGGCGGAGAA AGACGCGCCG CCAAACTTCC CCTCCCTACG AGGCTTCGGC GTGATCGACC  GCGCGAAGCG CGTGGTGGAG CGCCGGTGCC CGGGGACCGT CTCCTGCGCC GACATCCTCG CCTTCGCGGC ACGTGACGCG TCGCGCATAA TGGGGGGCGT CAAGTACTCC GTCCCCGCGG  GACGGCTCGA CGGCCGGGTC TCCCGGTCCG CCGAAGCGCT CAACAACCTC CCACCCGCGA GCTCCAACAT CACGCGGCTC GTCTCCCTCT TCAAGTCCAA GAACCTGACC GCCGACGACA  TGGTCACGCT GTCCGGGGCG CACTCCATCG GCCGATCCCA CTGCTCCTCC TTCACCTCGC GCCTCTACCC GAGGATCGAC GCCACGCTGA ATGTCACTCT GGGGAAAGCT CTTCGTGCCG  GGAAGTGCCC GGCGGCGACG GGGAGGCTGG ATAGAGTGGT TCAGTTGGAC CATGTCACGC CGTTGATGCT GGACACGCAG TATTATGTCA ATGTGGGGAA CCATGAGGTG CTCTTCGGGT  CCGACCAGGC GCTGACGGAC AGGACCGACA CGGCGAGGCT CGTCGCGGCG TACGCCGGCA ACCGGAAGCT CTGGTCGCGG CGGTTCGGGG AGGCCATGGT GCAGATGGGC TACGCCGACG  TGCTCACCGG ACCGCCAGGG GAGATCAGGA AAGTCTGCAG CAGAGTCAAC TAAAGCTAGC TTAGCTAGTG GAGTAGTACA GCATCAAACA CATTTCTTTT GTTTTATTTT TTTCTCTCGA  TTCAGAGTTC TGTGCATGCA TGCACATGTG TACTGATCCG GCCGCTATTA GCTGTACATG ATATGATCGA TCGCCAGATT CTGCCTTAAT TGGCTCCGAG GTGCATGCTA CCTAAGGGTA  GATCAGTTGT CACATTGTCG GAAAATTCCA TTGATTGATT TTGTGGGGCT ATACTTGGTT ATTAGGAGAG AAATGAATGA ATCAAGAATG ATAATGAGAT CAGTGTATTA ATTGGTTGTT 
TCATAATA 

Retrieve as FASTA