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Entry information : BdiAPx04 (Bradi3g45700)
Entry ID 7878
Creation 2011-01-14 (Toky Ramarohetra)
Last sequence changes 2011-01-14 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-19 (Toky Ramarohetra (Scipio))
Peroxidase information: BdiAPx04 (Bradi3g45700)
Name (synonym) BdiAPx04 (Bradi3g45700)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue types Flowers
Spikes
Inducers Abiotic stress
Drought
Repressor N/D
Best BLASTp hits
Perox score E-value BdiAPx04
start..stop		 S start..stop
TaAPx01-1A 733 0 40..440 29..431
HvAPx07 730 0 1..440 1..446
TaAPx01-1D 703 0 20..440 22..421
ZmAPx08 694 0 1..440 1..451
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 47703875..47704033 157 N° 2 47703652..47703795 142 N° 3 47702225..47702345 119 N° 4 47702020..47702120 99
N° 5 47701829..47701916 86 N° 6 47701624..47701691 66 N° 7 47701450..47701536 85 N° 8 47700845..47700919 73
N° 9 47700685..47700762 76 N° 10 47700483..47700587 103 N° 11 47700105..47700248 142 N° 12 47699865..47700017 151
complement(join(47699865..47700017,47700105..47700248,47700483..47700587,4770068 5..47700762,47700845..47700919,47701450..47701536,47701624..47701691,47701829..4 7701916,47702020..47702120,47702225..47702345,47703652..47703795,47703875..47704 033))


exon

Literature and cross-references BdiAPx04 (Bradi3g45700)
Literature Lucas,S., Rokhsar,D., Wang,M., Lindquist,E.A., Fox,S.E., Vogel,J., Bragg,J.N., McKenzie,N., Bevan,M.W., Garvin,D., Michael,T., Hazen
,S., Chang,J., Laudencia-Chingcuanco,D., Weng,Y. and Mockler,T.
DOE Joint Genome Institute Brachypodium distachyon EST project.
Unpublished (2009).
DNA ref. Phytozome 12:   Bd3 (47704033..47699865)
Protein sequence: BdiAPx04 (Bradi3g45700)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   440
PWM (Da):   %s   47344.86 Transmb domain:   %s   o420-439i
PI (pH):   %s   5.8
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAERLASSASLLPASPSPSTRRAAAAAVASFPSCSGSARTGLRLRPSPSRFSQKAAGRGRGGAGGGLRVVRCMAASDAGQLKSAREDIKEILKTNYCHPILIRLGWHDSGTYDKNIEEWP
LRGGADGSLRFDPELSHGANAGLTSALKLIQPIKDKYPGITYADLFQLASATAVEAGGPKIPMKYGRADITSPEQCPPEGRLPDAGPRIPAEHLREVFYRMGLDDEIVALSGAHTLGRSR
PDRSGWGKSETKYTKDGPGEPGGQSWTAEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGISLDDDKGDAPVEEKKVAD
ADPAPADDNNGAASQPEPFVAAKYSYKKTELSDTMKQKIRAEYEGLGGSPEKALQSNYFLNIMIVIAGLAFLTSLLGS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, 11 introns), 9 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAGCGCCTCGCCTCCTCGGCCTCCCTCCTCCCGGCCTCGCCTTCCCCGTCCACCCGCCGCGCCGCGGCAGCGGCCGTCGCCTCCTTCCCCTCCTGCTCCGGCTCCGCCCGCACC
GGGCTCCGCCTCCGTCCGTCGCCCTCGCGCTTCTCGCAGGTCGGGTTCGATTTTTGTTTAGCATTCTAGCTTGATTGCGCCTACATCTGCTATCTGCTTACGTGGGAGTGAACTGCAGAA

AAGGCTGCGGGGAGAGGCCGCGGTGGCGCCGGCGGGGGGCTGCGGGTGGTCCGGTGCATGGCGGCGTCGGACGCCGGGCAGCTCAAGAGCGCGCGGGAGGACATCAAGGAGATCCTCAAG
ACCAATTACTGCCATCCCATCCTGGTATGGATGTCCTACTATTCAGTGCTCTTCTTAATTATAATCTCTAGGCTAAGTTAACGTAGGTGGTAAATCAATTCCAGTCGTGAATTGTTGATG
CCACATTGCTGCAAATTATGATCGCCAGACTGTAACACGTCGAAGTGTGCAGTTCGGGTTTGTCACTGTTAGCCGCTCATTCTTAACTTTAGTTTTTAGATACTCCCAGTTTGAATCGAA
TCGCTTTTCTTGTGGGCTGCCGTGTCGTTTTCACACAATGTAAGATGCATGGGTTGTGGGCAGAGTAGAAAAAATAAGTTGCTCACAAGGAAAATGAAAGAAATCTCCCCTAATTGCTAT
GTGACCTGTGCGATGCTACCTACTCCACTATTTTTTTGTAAGTTTAAAATAATGTTATTTATAGGTTGATAATTATCCTTTTAAACCTTGAAACGCATCTTTTCCTTGTAATTTCATGTC
TTTTCTGATCAGCCCTAGTTGTTCATATTTTCAACTTTTCAAGAAATGTGTCATGGAACAATGCTAGAGCTATCGGTTATCTTGCATCTTGCAATCAGTGCTAGTCCATGATATTGTTCT
TATGTTATCTTAGTTTATAGTTTCGTGAATGTAATAGGTGGTTGTTATGTTGCTAAGTGATGCATTGTTTGGCAACCATCGCAAAATATAGTGGTACCTGTGCAATATAGTCGAGAATTT
TTATGGTACCCTGGTACTCCCCAGAAGGGGTCAGGAGTACCAAACAAATCTGTCCGTCCATCTGTTAGGGTAGTTTAGACCTTTTGCCTAGGATGATTTGGACTTTCACGAGCGCCTCCT
GACTGCACACCGCGCCGCTGCCTGATCGATCGAACTCCATGCTCCATGTACGAGAGTACAGGACCGATCAAGTTTGCCATCAGTGGCTTGGGCTGACGGCAGGCTCGGCCGGCCGGCGTG
CTACTGCTTGGACTAAATTTCCTAGATATCGGAGCCAAATCTCGCCACCTCAATACTGGCCGCCGTAATTAACTGCGCTAAGTCCGTCCATCCAGCACTTACCCGGTTATCCCCTGTTAA
TTGACTTCGTAATTACGATTTTAGCCCCACAAACGACGGTACTCCCCATTATTGATCGATGGTACTCCCCGGTTGCTAGCTTGGAGTACAGATAAAATCTGTCCGTTAGATTAGAAGAAA
TTAACGGCTTATTTTAGTTCGTGGGTACTGTAAAAGTGCTCATATAGTCAGGAGTCATCAATCATCATGACACTCTGGTCACACACACCCGTTGTTGTGTGCAGATGCTAATGCTTTCAA
CTATGTTCAGATATCCGCTTGGGATGGCATGATTCTGGTACGTACGACAAAAATATTGAGGAGTGGCCACTGAGAGGCGGAGCGGATGGTAGCTTAAGGTTTGATCCTGAGCTGAGCCAT
GGAGCCAATGCTGGTATTTTGCCTTGACTCTTGACAGTTTCATATCATCAATCCTTGAATCTTCCAAACTCTGAAAGTGTAGAGTAATAGCTAATATATTTGGTTGTTTTTGGCCAGGTG
TCTGACTAGCGCTTTAAAGCTTATTCAGCCAATCAAGGATAAATACCCAGGTATCACTTATGCAGATTTGTTCCAGTTGGCGAGTGCTACTGCAGTTGAGGTCTCAGCCTTTTTCTCTGT
TCACGTATTTTTACTAGGCCATTTTGACAGAGGATCAGTAGAGTGTATATATGTGCTAATATGTCTTGTCAATCTCATTCCAGGAGAAGCTGGTGGCCCGAAAATTCCGATGAAATATGG
ACGGGCAGATATCACATCACCTGAGCAATGTCCACCTGAAGGGAGGCTTCCTGGTTAGTGCTTCGGACAAGCTCGTCATTCCACAGTGATTTCTCCTTCCATGTTTCGATCGATTTCTGA
TGTTATGATCTGTGAGAGGTACTTATCAAGATGTATAAATTGGTTGCTGCTGAATATGCACATTCCGCAGATATGCTGGCCCACGTATACCTGCTGAGCACCTTAGGGAGGTCTTCTATA
GAATGGGCCTTGATGACAAGGTGTGGGATCATGCCAGAAACTGGAACTTTCCCTTTCGGCCTGTTTGTGCTTGAGCTGTGTTGTTGATCCCTTGGAGTATTGTGCAGGAGAAATTGTTGC
ACTATCCGGAGCACATACACTTGGAAGATCAAGGCCTGACCGGAGTGGCTGGGGAAAGTCAGAAACAAAATATACAGTATGTTTTTCTGGGTCTCTTTATCGGGTTTAAAGCTGCAGGGC
ATTAATTTATTTTTTGTAATATGAGTGAAAAATGTCAGTCCCATACAGCGTTTACTACTGTACATGTGGGTATAGACTATAGACCCACAACTGCTCTTTCGAGACCTGTGGGGATTCTGC
ATATCCTATAATCGAGTTGGAAAGAAATGCACAGTGTTGCTATAATTTTTCTATTTAAAAACCACAATGTGCTTAGAAGCCTCATGGCACACAAAACCAAACCCCCCTGAAATCCTAACC
TCCTAGCTTCTCCCTTTGGTTTTTAGTTCGTTAGGAGTTTTCTGTTAGTTTTGGTTTTGGTTGCCTGGTCACCACCACTCTTCTGGCACACATTTAGAGGCTTGAAGAAAAATAAAAAAG
AATGTTGTGTTTTCAAAATCTTTGAGTCCTTGATCTTACTTGGATGTGATCATGTGATTAATTTGAACTGACGGTCGATCGGTGATCATCTGAGAAAACTAAGCTGTTCTGCTATTGTGT
GTACAGAAAAGGATGGGCCCGGTGAACCTGGAGGTCAGTCATGGACAGCTGAATGGTTGAAGTTTGACAACAGTTATTTCAAGGTGTGTTCCATTTTCTTCAAGACTTGCGAGTTAAATT
ATTCATTTGAGTCTCGGATGGTTCGAACGGTTAACAATGTTTCAGGAGACATAAAAGAGCAAAGGGATCAGGATCTTCTAGTATTGCCTACAGATGCTGCATTATTTGAGGACCCATCAT
TCAAGGTATACCTGATTATGCTTAATTTGTGACTGGTGAGGATGCTATGAAACGGTGGTACTTCTAGTTGAATCTGAGAATCTGAAACACGCATGCACGCAGGTGTATATGCAGAGAAGT
ACGCAGAAGACCAAGAGGCATTCTTCAAAGACTACGCTGAAGCCCATGCTAAACTCAGCAACCTTGGTGCAAAGTTTGATCCTCCTGAGGTGAACCCTGTTTAGGGCCTGTTTGGTTGTT
TGCCATATTTGGGGGTTCTTGTCAAACTTACCTAATAAGGGAGACTTTGCCAAATGGAGCAAAATCACCAGGAAGGCAATCCAGTTCTTTAGCTCTTCCAGCATATGCCATGCTTGCTTG
CTCGTCCTATTTTCAGTGTTCAGTTTTGCGTAGCTGCTCAAGTTCTTGTAAAACCTAACGTGTGGTTTGATAATATCATGCAGGGGGAATCTCGTTGGACGATGACAAGGGTGACGCCCC
GGTGGAGGAGAAGAAGGTTGCTGATGCTGATCCAGCACCAGCAGATGATAACAATGGAGCAGCGTCGCAGCCAGAACCCTTCGTTGCCGCCAAATACTCCTACAAAAAGGTTTGCACTTG
TACAATCCAGGCCCAGCTGGATGCTAAACGTAAGGAAGTAGGATGCTGAGAAACTGCCTGCTCCGTGAAATTGCAGACACGGAGCTGTCGGACACGATGAAGCAGAAGATCAGGGCGGAG
TACGAGGGGCTTGGAGGCAGCCCGGAGAAGGCTCTGCAGTCTAACTACTTCCTCAACATTATGATCGTCATCGCAGGGCTGGCATTCTTGACATCTCTGCTCGGGAGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAGCGCCTCGCCTCCTCGGCCTCCCTCCTCCCGGCCTCGCCTTCCCCGTCCACCCGCCGCGCCGCGGCAGCGGCCGTCGCCTCCTTCCCCTCCTGCTCCGGCTCCGCCCGCACC
GGGCTCCGCCTCCGTCCGTCGCCCTCGCGCTTCTCGCAGAAGGCTGCGGGGAGAGGCCGCGGTGGCGCCGGCGGGGGGCTGCGGGTGGTCCGGTGCATGGCGGCGTCGGACGCCGGGCAG
CTCAAGAGCGCGCGGGAGGACATCAAGGAGATCCTCAAGACCAATTACTGCCATCCCATCCTGATCCGCTTGGGATGGCATGATTCTGGTACGTACGACAAAAATATTGAGGAGTGGCCA
CTGAGAGGCGGAGCGGATGGTAGCTTAAGGTTTGATCCTGAGCTGAGCCATGGAGCCAATGCTGGTCTGACTAGCGCTTTAAAGCTTATTCAGCCAATCAAGGATAAATACCCAGGTATC
ACTTATGCAGATTTGTTCCAGTTGGCGAGTGCTACTGCAGTTGAGGAAGCTGGTGGCCCGAAAATTCCGATGAAATATGGACGGGCAGATATCACATCACCTGAGCAATGTCCACCTGAA
GGGAGGCTTCCTGATGCTGGCCCACGTATACCTGCTGAGCACCTTAGGGAGGTCTTCTATAGAATGGGCCTTGATGACAAGGAAATTGTTGCACTATCCGGAGCACATACACTTGGAAGA
TCAAGGCCTGACCGGAGTGGCTGGGGAAAGTCAGAAACAAAATATACAAAGGATGGGCCCGGTGAACCTGGAGGTCAGTCATGGACAGCTGAATGGTTGAAGTTTGACAACAGTTATTTC
AAGGACATAAAAGAGCAAAGGGATCAGGATCTTCTAGTATTGCCTACAGATGCTGCATTATTTGAGGACCCATCATTCAAGGTATATGCAGAGAAGTACGCAGAAGACCAAGAGGCATTC
TTCAAAGACTACGCTGAAGCCCATGCTAAACTCAGCAACCTTGGTGCAAAGTTTGATCCTCCTGAGGGAATCTCGTTGGACGATGACAAGGGTGACGCCCCGGTGGAGGAGAAGAAGGTT
GCTGATGCTGATCCAGCACCAGCAGATGATAACAATGGAGCAGCGTCGCAGCCAGAACCCTTCGTTGCCGCCAAATACTCCTACAAAAAGACGGAGCTGTCGGACACGATGAAGCAGAAG
ATCAGGGCGGAGTACGAGGGGCTTGGAGGCAGCCCGGAGAAGGCTCTGCAGTCTAACTACTTCCTCAACATTATGATCGTCATCGCAGGGCTGGCATTCTTGACATCTCTGCTCGGGAGC
TGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGACGGCCAA GATTAGACTC GTCTCCCACG CCCACGCAGC GCCTCTCGCT GGCCACCTCC AGTCCCCCGG CTAGTTCCCA GTTGTTCTCA GTCGCCCAAG CCGTGGACCA GCCATCAATC  CTCCTCTCCA AATATTCCAA ACCCCGCCCA CGCCGCGCCA TCGCCATGGC GGAGCGCCTC GCCTCCTCGG CCTCCCTCCT CCCGGCCTCG CCTTCCCCGT CCACCCGCCG CGCCGCGGCA  GCGGCCGTCG CCTCCTTCCC CTCCTGCTCC GGCTCCGCCC GCACCGGGCT CCGCCTCCGT CCGTCGCCCT CGCGCTTCTC GCAGAAGGCT GCGGGGAGAG GCCGCGGTGG CGCCGGCGGG  GGGCTGCGGG TGGTCCGGTG CATGGCGGCG TCGGACGCCG GGCAGCTCAA GAGCGCGCGG GAGGACATCA AGGAGATCCT CAAGACCAAT TACTGCCATC CCATCCTGAT CCGCTTGGGA  TGGCATGATT CTGGTACGTA CGACAAAAAT ATTGAGGAGT GGCCACTGAG AGGCGGAGCG GATGGTAGCT TAAGGTTTGA TCCTGAGCTG AGCCATGGAG CCAATGCTGG TCTGACTAGC  GCTTTAAAGC TTATTCAGCC AATCAAGGAT AAATACCCAG GTATCACTTA TGCAGATTTG TTCCAGTTGG CGAGTGCTAC TGCAGTTGAG GAAGCTGGTG GCCCGAAAAT TCCGATGAAA  TATGGACGGG CAGATATCAC ATCACCTGAG CAATGTCCAC CTGAAGGGAG GCTTCCTGAT GCTGGCCCAC GTATACCTGC TGAGCACCTT AGGGAGGTCT TCTATAGAAT GGGCCTTGAT  GACAAGGAAA TTGTTGCACT ATCCGGAGCA CATACACTTG GAAGATCAAG GCCTGACCGG AGTGGCTGGG GAAAGTCAGA AACAAAATAT ACAAAGGATG GGCCCGGTGA ACCTGGAGGT  CAGTCATGGA CAGCTGAATG GTTGAAGTTT GACAACAGTT ATTTCAAGGA CATAAAAGAG CAAAGGGATC AGGATCTTCT AGTATTGCCT ACAGATGCTG CATTATTTGA GGACCCATCA  TTCAAGGTAT ATGCAGAGAA GTACGCAGAA GACCAAGAGG CATTCTTCAA AGACTACGCT GAAGCCCATG CTAAACTCAG CAACCTTGGT GCAAAGTTTG ATCCTCCTGA GGGAATCTCG  TTGGACGATG ACAAGGGTGA CGCCCCGGTG GAGGAGAAGA AGGTTGCTGA TGCTGATCCA GCACCAGCAG ATGATAACAA TGGAGCAGCG TCGCAGCCAG AACCCTTCGT TGCCGCCAAA  TACTCCTACA AAAAGACGGA GCTGTCGGAC ACGATGAAGC AGAAGATCAG GGCGGAGTAC GAGGGGCTTG GAGGCAGCCC GGAGAAGGCT CTGCAGTCTA ACTACTTCCT CAACATTATG  ATCGTCATCG CAGGGCTGGC ATTCTTGACA TCTCTGCTCG GGAGCTGAGA GCGTTGGTCT TGACGGATCT GCCTTTTTTT TTGTTGGAAT ATACGGAGTG TCATTTGTCC AGAGATTGAC  CAGAGTACAG GATGAGCATG TGAACCAGCT GCATTGTTTT ATGTACCGCT ACATAAGCAA CACAAAACCA CATTTTCCTA TTGTAGCAGC CCCTGGTGTT CCTCACGTCT TGGTAACAAA 
AAGACAGATG TTGTTCTGTT TGTGCAGGCG TGTCTCGTCC GGTTCTTGTT ATACTTTTCG AAAATTTGAG TAATACTTGC GCATCA 

Retrieve as FASTA