Entry information : BdiPrx117 (Bradi4g05980)
Entry ID 7883
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2014-01-08 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx117 (Bradi4g05980)
Name (synonym) BdiPrx117 (Bradi4g05980)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx117
start..stop
S start..stop
SbPrx107 469 1e-167 10..339 19..343
ZmPrx72 469 2e-167 26..338 45..354
HvPrx51 465 3e-166 24..329 24..322
OsPrx138 450 3e-160 21..338 33..345
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4956545..4956955 411 N° 2 4957053..4957225 173 N° 3 4961479..4961906 428  
join(4956545..4956955,4957053..4957225,4961479..4961906)


exon

Literature and cross-references BdiPrx117 (Bradi4g05980)
DNA ref. Phytozome 12:   Bd4 (4956545..4961906)
Protein sequence: BdiPrx117 (Bradi4g05980)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (314)
PWM (Da):   %s   35170.09 (32551.6)  
PI (pH):   %s   8.16 (7.44) Peptide Signal:   %s   cut: 26 range:26-339
Sequence 380
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Send to Peroxiscan
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MRSVRAPRRLALLAVLLSACALADAAVLKAHFYRHSCPAAEAVVRDIVLARVAADPANALPARLLRLFFHDCFVRGCDASVLLDSAAGDNAAAAEKDAAPNKSLGGFDVVDTAKAVLEAVCPGVVSCADVVALAARDAISFQFGRELWEVQLGRRDGVESRAAEALAEIPSPSANFTALEAGFASKGLDVKDLVILSGAHTIGVGHCNLFSSRLFSSSSTTGAGAAAPATDPALNAAYAAQLRAACGSPSNNATAVAMDPGSPARFDAHYYVNLKLGRGLFSSDAALLSDPRAAGMIHALTREDYFLREFKGAVRKMGRVGVLTGAQGEIRRNCRVVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, introns 2 and 3), no EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGAGATCAGTGAGAGCGCCGCGGCGGCTGGCATTACTGGCCGTCCTACTGTCGGCGTGCGCTCTGGCGGATGCGGCGGTGCTGAAGGCGCACTTCTACCGGCACAGCTGCCCGGCGGCGG
AGGCGGTGGTGCGGGACATCGTGCTGGCCCGCGTGGCGGCCGACCCCGCCAACGCGCTCCCGGCCAGGCTGCTCCGCCTCTTCTTCCACGACTGCTTCGTGAGGGGCTGCGACGCGTCGG
TGCTGCTGGACTCGGCGGCGGGCGACAACGCGGCGGCGGCGGAGAAGGACGCGGCGCCGAATAAGTCGCTGGGCGGGTTCGACGTGGTGGACACGGCCAAGGCGGTGCTGGAGGCCGTCT
GCCCCGGCGTCGTCTCCTGCGCCGACGTCGTCGCGCTCGCCGCCAGGGAC
GCCATATCCTTCCAGGTCTGAGTCTATCGTCAGTTCGTCACACATATGAATCAGCTAGCATCACCGTTAA
TCTGTCGAGTAATGCTCATAATTAACGAGCTTTGATTGATTGCAGTTTGGGCGGGAGCTGTGGGAGGTGCAGCTGGGGCGGCGGGACGGCGTGGAGTCGCGCGCGGCGGAGGCGCTGGCG
GAGATCCCGTCGCCGTCGGCCAACTTTACGGCGCTGGAGGCCGGGTTCGCCAGCAAGGGGCTCGACGTCAAGGACCTCGT
CATCCTCTCCGGTACGTTACGTGCGTGCGTTATCACGTCA
GAATTAATTTAATTTAGACGTACTTATGGACAAGCATGCGCGTAATTAATGACGGGTCACTGTCGTTTCACGTAACACTGGCACGTCGACCTGTTAAGTTCTCGTCTCGACAATCGAGAC
AGTACTGACTCTTGGAAAATTGCCCGTCTTAATTAAATCAAATGATGTGTTTCGTTAATTAGGAACTTAAATTAGGATCACGGTCGATCTAGAGTCACATCGTCTGATGGAGCTAGCTAG
TGAACGCAGTACAGTACGCTGAGTAGCGGCTACACCACCGGCACCGGGATGACGGCGACCGGGCGGCTGCCGGCCGGTGCGTGTCCACTGCATGCATGTGCACGTACGTGCACGTGCATG
GCCGCCGGGATCGACGCTCGACGGACGGCCAGCATCGGTCGATCGGTCGTTCCGTCGGTTAGTTTGGCTGCGAGTGCATGCATATGCGGCATATGCACGGGCGTTCGCATATGGATGGAT
GGAAGCAAGGCAGCAAGCTATATATAGCGCTGTGTATCTACTATCTAGCGCTGGAAAAGGATGGAGCAACCACCGCGTAGCTAGGCGCGTGCGCCCATCGGTCGGCCGCTTGCAGTGCGT
GGTCGATCGAGCCCGCCGGCCATTCATAGCCGCTCGTTGCTGATCGGCTAGCTACGGCCGTTACGTGCTCCGTCGTATCATGTTATGTCCATGGATGCATTTTTCCTCACGTCAATAATA
TTAGGATCATGGATGTATTTTTCCTCACGTCAGTTATGTCCAGCGGGCTCTTTGCCTGACGTGTACTCAGTCAACGTGCCACGTAGGCCGGTCAAACGCTCCTGCACGAGCGTAGGACTT
GTCGTGACACACTTCGCAAAAAATTGGGACTTAAATATGCAGTTTAGTAATTTTAGAACTAACTTGACACTTTATCAATAATATTAGGACCGAGGGTGTATTTAATCTAATTTTATAGTT
TTAGTCATGTCCAGCGGACCCTTTAGCTGACGTATATTTGGTCAGCATGCCACGTAGGCTGCTCAAACGTTCTTGGGCAAGCTTAGAACCTATCATGACACACTTTCAAAAAAAAAATAG
GACCTAAATATGTAGTTTAGTAATTTTAGGACTAACTTGATACCTCGTTAATAATAATAGGACCGCCGGTGTATTTTACTCGACGTTAAACTACTGCACAGTGTGACATCATAAGTTTGG
CACAAATATAGGGAAATGCATGTCAGCTTCCGTGATCGATCGACACGTACGTGCTCTACACAGAGAAATCTGGCCTCAAAATGATCATATCACACGTCAATAATTAACTAAAGCCAGTTG
ACTACATTAAGAAGCATATTAGTTTAATTTGAGGCTTAGGAATCCAAACGAAACAATAACGACAATGGTTATAGTGGCATGAAATAAGTTAATTAGTTAGACCATCTCTTAGAGAGTTCT
CATCACATTCCCTATAGTCAAATTTAATGATTTTGCTTCAAAAAGGCACTCCAACAGATGCCCCATCCCATTCCCCACCTCAAGACGTCCCCAAATTGAGCTAGGGATTCCTCATATTGA
GAAGTGGGATGGGGCCCCATATCAATCTGAGGTGAGATAGAGAAAGAAAATGGTAGGAGGGAGAGCCAAATCAACCCTTAATTTGACTTTTCCGAATCTTGATGAGATATAGGGGATGAG
ATATGAGGAAGAGGATTTTTGGAGGGTATCTTTTATAAGGAATTCTTAAATATAGGTTTTGGGAAAACAAATATGGGGAAGCTTTTGGAGATGCTCTTAGGGCTAGGGCTAAGTCAAAAG
ACACTCGATCTAATAAGTTTCGCCCTTTCCACAAAAAGGCCATTGCTGATGAGTGGTAATCCCGTTCCCTGAATGCATGCATGTGCATGCATTGTGCCCTGCTCAATCAGGCGCGCAGCA
GAACCAAGTGGCTACTGTCTCGTCAAAAGATCGAATTATCACAGCTTGCTATCCCATCAACAAATTTAAGGAAGGAGATGCTTGCATGGTCCTGGTTTTAAATCACTTAGTGCAGCTGCT
GATACAGCTATTTCAGCTGTACTGTTAGCTAAGATAGTGCCTCTTAGTGTGGTGGTTACGGTAACCGCCAACCACCCCCACTCCTAACTAACGCCCTACGCATATCCAAGCAACTGTGCT
GCATCGAGTGGAAGAGATTGGATCCTGTTTGGTACATCTATCATTGGTTAAGTGATGTGGGCAATGTCCTAGATTTCTCTAGTGTCGTCTCAAGTGCCAAATGCCAATTTATGAGCTGTT
TGGCTGCCGTACATGCATGGACCGCCGCACCTGACCGGCATGGGCTAACTAACTAGCTAGATGCAGACTGGAAATAGCGGCTGAGTGAAGTGGACCAATGCCGAATGTTCGAGTTAATCA
TTATCGTTCTTTGGACTTGTTTGCTCTAGCTACCTGGCCACATTTTTATGCGCACCTGCACTGCATAGCTCAGAAGTGGGGTGATTGTGGGAGAGTAGCCTCATATATACTCGTAGCGCT
TGTTATGTATGGCATGATCCATCAAATGCATTCTTGGATTAGTTCCGGTTTAAGTATGCATTACATAGTTAAAAATGTTATGAAAACTAAAAACGTATATGTGATTATTATTATTTTTGA
AAATAACTGATTGCATTGTTCACATGCATACAAACCACATGACGCACGCACCCACACAACACATACAGAAGAAAAGAATGACCGGAGATGCCATACTAATGACGGACACGTCACCTCCCA
CTAAAAAGATAATCCGTCTCAAATGGAACACACATGACATCGAATCTATGATCGAGGATTCAGCCACAACTTTAATCATCAATTGTTGGTTCTCATGATATGTTTTCTAAATCAATCTGG
AACAGAATATATGGTCGTTTCTCTAGGACTGAAAAAGCAGTGGAAACTTTCAACCATTACAAAGAAAAAAGCTAGATGAGAATACAAATACCACACCAACAAAAATTGTGCAAATGAAAA
AGAACAATGATTTCTGAAGAAACAGCCATGAAAATACGAAAATGGAATTTTCCATTTCAGCAAATACATAAATATGTCTGCCCACACAAGCCTATACTTAGCCCAACTGAATAACCCATA
GGCCAACCCAAGCTTGTCTTGCCTTCTGGATACCCACTGTGAACCTAAACTCTCATATGTTTTCCAAACCCCCGCCCTTCGTGCATGACCACTTAGCTCTCGTGGTCTCTATCGTCCTTC
ACAACGCTAGTTGCCCGACACATCGTTGCATCCTCTCAAGTTTCTCGAGATTTGTGTTGAATCAAGAGATCCAATGGTGCAACAAGGTCTAACACTGGGTCCGGTTCTTTTAGAATTATT
TCTCCACCAGGACCTCGCCTCTCCATAGACGACCCATTTCCGATCCCATGTTTGTACCACCTCCACTTAACCACGCCTCAGCCTAGCGTGCCGTTTAACTGGGGGTTTTGTGTTTTGACA
AATATTTGCTTTTGTGTCTTTTACGTTCCACATTCACTCTATATTTAGTTTAATATATATTTTTTTATTTCCAGCTTTTGTGCTAAAAGATATGAAAACAAATACATAGCGCTATGTTTC
ATCCATTTTTGCCACTAGTAGTTATCTCAAACTTGATTTGAAAAGTGTGGCATCATTTCGTACTTATGCAAGACTTGGTATAGTTTTGCGAAACTTTTTCCCAATTTCTAGAGAAAAGTA
CTTTTTTCGTCTCTCAACTTGTCGGAAAGTTTGCTTTTCGTCCCTCAAAAAATTTCGTACTTTTTTTGTCTCTCAATTTTCAAAACCGGACATTTTTAGTCTCTCGGTCCATCCAAAGTG
GTTTTCCTAACCACGTGTCTGGTTTTCGCATAGTTTTTTCACTTATTTTTTTTCAATCAAGATATGGATGATGCAGATGGAAGAGAAGTACAACCAGTGCCTAGACGAGATCCAGAGCAC
GACGGCGGCCAATTTCAACAGCCTCGGCGACCACGGGATTAAGTGCAAACCGGACACGTGGCTAGACAAACCGCTTCGTATAGCTTTAAGGACTAAAAGTGTCTGGTTTTGAAAGTTGAG
AGATGAAAAAAGTACTAATTGTTTTTAAGAGACGAGAAATGAATTTTCCGACGAGTCGAGGGACGAAAAAAATACTTCTCTCCAATTTGTCTGTTTCAAACTTACCATACACAAACACAT
AAACATTTCGCAGGCGCACACACCATCGGCGTGGGCCACTGCAACCTGTTCAGCAGCCGCCTCTTCAGCTCCTCCTCCACCACCGGCGCCGGCGCCGCCGCCCCGGCCACGGACCCGGCC
CTGAACGCCGCCTACGCCGCGCAGCTGCGGGCCGCGTGCGGGTCCCCGTCCAACAACGCGACGGCGGTGGCCATGGACCCCGGCAGCCCGGCCCGGTTCGACGCCCACTACTACGTGAAC
CTCAAGCTGGGCCGCGGCCTGTTCAGCTCCGACGCCGCGCTGCTGTCCGACCCCCGCGCCGCCGGCATGATCCACGCGCTCACCAGGGAGGACTACTTCCTCCGGGAGTTCAAGGGCGCC
GTCCGCAAGATGGGCCGCGTGGGCGTGCTCACCGGCGCCCAAGGGGAGATCAGGAGGAACTGCAGGGTCGTCAACTCGTAG

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGATCAG TGAGAGCGCC GCGGCGGCTG GCATTACTGG CCGTCCTACT GTCGGCGTGC GCTCTGGCGG ATGCGGCGGT GCTGAAGGCG CACTTCTACC GGCACAGCTG CCCGGCGGCG  GAGGCGGTGG TGCGGGACAT CGTGCTGGCC CGCGTGGCGG CCGACCCCGC CAACGCGCTC CCGGCCAGGC TGCTCCGCCT CTTCTTCCAC GACTGCTTCG TGAGGGGCTG CGACGCGTCG  GTGCTGCTGG ACTCGGCGGC GGGCGACAAC GCGGCGGCGG CGGAGAAGGA CGCGGCGCCG AATAAGTCGC TGGGCGGGTT CGACGTGGTG GACACGGCCA AGGCGGTGCT GGAGGCCGTC  TGCCCCGGCG TCGTCTCCTG CGCCGACGTC GTCGCGCTCG CCGCCAGGGA CGCCATATCC TTCCAGTTTG GGCGGGAGCT GTGGGAGGTG CAGCTGGGGC GGCGGGACGG CGTGGAGTCG  CGCGCGGCGG AGGCGCTGGC GGAGATCCCG TCGCCGTCGG CCAACTTTAC GGCGCTGGAG GCCGGGTTCG CCAGCAAGGG GCTCGACGTC AAGGACCTCG TCATCCTCTC CGGCGCACAC  ACCATCGGCG TGGGCCACTG CAACCTGTTC AGCAGCCGCC TCTTCAGCTC CTCCTCCACC ACCGGCGCCG GCGCCGCCGC CCCGGCCACG GACCCGGCCC TGAACGCCGC CTACGCCGCG  CAGCTGCGGG CCGCGTGCGG GTCCCCGTCC AACAACGCGA CGGCGGTGGC CATGGACCCC GGCAGCCCGG CCCGGTTCGA CGCCCACTAC TACGTGAACC TCAAGCTGGG CCGCGGCCTG  TTCAGCTCCG ACGCCGCGCT GCTGTCCGAC CCCCGCGCCG CCGGCATGAT CCACGCGCTC ACCAGGGAGG ACTACTTCCT CCGGGAGTTC AAGGGCGCCG TCCGCAAGAT GGGCCGCGTG  GGCGTGCTCA CCGGCGCCCA AGGGGAGATC AGGAGGAACT GCAGGGTCGT CAACTCGTAG AGCCCGGTCC ATCCATCTGG AGGGGATCGG CTATGTATAT TCTGGTCATT TGGTGGTAAT  TAATTAATTA TTATATCGAG TTTGATTGTG TTTATTCAGG CGTGTTGTGG TGTGGACATG GATTGTGCAG AATAAGAAAT ATAAGCTGGC TAATTGGATT GATTCCAGCT GGGTTGTATA 
ATTTCGAGAT AAGTTGAACA TTGTGTTGTT CTGCCTAATG GTAGATAAGG GATTGTTGAT CTGGTACAAC A 

Retrieve as FASTA