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Entry information : BdiPrx117 (Bradi4g05980)
Entry ID 7883
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2014-01-08 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx117 (Bradi4g05980)
Name (synonym) BdiPrx117 (Bradi4g05980)
Class Class III peroxidase    [Orthogroup: Prx194]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx117
start..stop		 S start..stop
TaPrx150-1A 523 0 29..339 29..331
TaPrx150-1D 501 1.48e-180 29..339 29..331
SbPrx107 469 1.21e-167 10..339 19..343
ZmPrx72 469 2.19e-167 26..338 45..354
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4956545..4956955 409 N° 2 4957053..4957225 171 N° 3 4961479..4961906 426  
join(4956545..4956955,4957053..4957225,4961479..4961906)


exon

Literature and cross-references BdiPrx117 (Bradi4g05980)
DNA ref. Phytozome 12:   Bd4 (4956545..4961906)
Protein sequence: BdiPrx117 (Bradi4g05980)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (314)
PWM (Da):   %s   35170.09 (32551.6)  
PI (pH):   %s   8.16 (7.44) Peptide Signal:   %s   cut: 26 range:26-339
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRSVRAPRRLALLAVLLSACALADAAVLKAHFYRHSCPAAEAVVRDIVLARVAADPANALPARLLRLFFHDCFVRGCDASVLLDSAAGDNAAAAEKDAAPNKSLGGFDVVDTAKAVLEAV
CPGVVSCADVVALAARDAISFQFGRELWEVQLGRRDGVESRAAEALAEIPSPSANFTALEAGFASKGLDVKDLVILSGAHTIGVGHCNLFSSRLFSSSSTTGAGAAAPATDPALNAAYAA
QLRAACGSPSNNATAVAMDPGSPARFDAHYYVNLKLGRGLFSSDAALLSDPRAAGMIHALTREDYFLREFKGAVRKMGRVGVLTGAQGEIRRNCRVVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, introns 2 and 3), no EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGATCAGTGAGAGCGCCGCGGCGGCTGGCATTACTGGCCGTCCTACTGTCGGCGTGCGCTCTGGCGGATGCGGCGGTGCTGAAGGCGCACTTCTACCGGCACAGCTGCCCGGCGGCG
GAGGCGGTGGTGCGGGACATCGTGCTGGCCCGCGTGGCGGCCGACCCCGCCAACGCGCTCCCGGCCAGGCTGCTCCGCCTCTTCTTCCACGACTGCTTCGTGAGGGGCTGCGACGCGTCG
GTGCTGCTGGACTCGGCGGCGGGCGACAACGCGGCGGCGGCGGAGAAGGACGCGGCGCCGAATAAGTCGCTGGGCGGGTTCGACGTGGTGGACACGGCCAAGGCGGTGCTGGAGGCCGTC
TGCCCCGGCGTCGTCTCCTGCGCCGACGTCGTCGCGCTCGCCGCCAGGGACACGCCATATCCTTCCAGGTCTGAGTCTATCGTCAGTTCGTCACACATATGAATCAGCTAGCATCACCGT
TAATCTGTCGAGTAATGCTCATAATTAACGAGCTTTGATTGATTGCAGTTTGGGCGGGAGCTGTGGGAGGTGCAGCTGGGGCGGCGGGACGGCGTGGAGTCGCGCGCGGCGGAGGCGCTG
GCGGAGATCCCGTCGCCGTCGGCCAACTTTACGGCGCTGGAGGCCGGGTTCGCCAGCAAGGGGCTCGACGTCAAGGACCTCGTGTCATCCTCTCCGGTACGTTACGTGCGTGCGTTATCA
CGTCAGAATTAATTTAATTTAGACGTACTTATGGACAAGCATGCGCGTAATTAATGACGGGTCACTGTCGTTTCACGTAACACTGGCACGTCGACCTGTTAAGTTCTCGTCTCGACAATC
GAGACAGTACTGACTCTTGGAAAATTGCCCGTCTTAATTAAATCAAATGATGTGTTTCGTTAATTAGGAACTTAAATTAGGATCACGGTCGATCTAGAGTCACATCGTCTGATGGAGCTA
GCTAGTGAACGCAGTACAGTACGCTGAGTAGCGGCTACACCACCGGCACCGGGATGACGGCGACCGGGCGGCTGCCGGCCGGTGCGTGTCCACTGCATGCATGTGCACGTACGTGCACGT
GCATGGCCGCCGGGATCGACGCTCGACGGACGGCCAGCATCGGTCGATCGGTCGTTCCGTCGGTTAGTTTGGCTGCGAGTGCATGCATATGCGGCATATGCACGGGCGTTCGCATATGGA
TGGATGGAAGCAAGGCAGCAAGCTATATATAGCGCTGTGTATCTACTATCTAGCGCTGGAAAAGGATGGAGCAACCACCGCGTAGCTAGGCGCGTGCGCCCATCGGTCGGCCGCTTGCAG
TGCGTGGTCGATCGAGCCCGCCGGCCATTCATAGCCGCTCGTTGCTGATCGGCTAGCTACGGCCGTTACGTGCTCCGTCGTATCATGTTATGTCCATGGATGCATTTTTCCTCACGTCAA
TAATATTAGGATCATGGATGTATTTTTCCTCACGTCAGTTATGTCCAGCGGGCTCTTTGCCTGACGTGTACTCAGTCAACGTGCCACGTAGGCCGGTCAAACGCTCCTGCACGAGCGTAG
GACTTGTCGTGACACACTTCGCAAAAAATTGGGACTTAAATATGCAGTTTAGTAATTTTAGAACTAACTTGACACTTTATCAATAATATTAGGACCGAGGGTGTATTTAATCTAATTTTA
TAGTTTTAGTCATGTCCAGCGGACCCTTTAGCTGACGTATATTTGGTCAGCATGCCACGTAGGCTGCTCAAACGTTCTTGGGCAAGCTTAGAACCTATCATGACACACTTTCAAAAAAAA
AATAGGACCTAAATATGTAGTTTAGTAATTTTAGGACTAACTTGATACCTCGTTAATAATAATAGGACCGCCGGTGTATTTTACTCGACGTTAAACTACTGCACAGTGTGACATCATAAG
TTTGGCACAAATATAGGGAAATGCATGTCAGCTTCCGTGATCGATCGACACGTACGTGCTCTACACAGAGAAATCTGGCCTCAAAATGATCATATCACACGTCAATAATTAACTAAAGCC
AGTTGACTACATTAAGAAGCATATTAGTTTAATTTGAGGCTTAGGAATCCAAACGAAACAATAACGACAATGGTTATAGTGGCATGAAATAAGTTAATTAGTTAGACCATCTCTTAGAGA
GTTCTCATCACATTCCCTATAGTCAAATTTAATGATTTTGCTTCAAAAAGGCACTCCAACAGATGCCCCATCCCATTCCCCACCTCAAGACGTCCCCAAATTGAGCTAGGGATTCCTCAT
ATTGAGAAGTGGGATGGGGCCCCATATCAATCTGAGGTGAGATAGAGAAAGAAAATGGTAGGAGGGAGAGCCAAATCAACCCTTAATTTGACTTTTCCGAATCTTGATGAGATATAGGGG
ATGAGATATGAGGAAGAGGATTTTTGGAGGGTATCTTTTATAAGGAATTCTTAAATATAGGTTTTGGGAAAACAAATATGGGGAAGCTTTTGGAGATGCTCTTAGGGCTAGGGCTAAGTC
AAAAGACACTCGATCTAATAAGTTTCGCCCTTTCCACAAAAAGGCCATTGCTGATGAGTGGTAATCCCGTTCCCTGAATGCATGCATGTGCATGCATTGTGCCCTGCTCAATCAGGCGCG
CAGCAGAACCAAGTGGCTACTGTCTCGTCAAAAGATCGAATTATCACAGCTTGCTATCCCATCAACAAATTTAAGGAAGGAGATGCTTGCATGGTCCTGGTTTTAAATCACTTAGTGCAG
CTGCTGATACAGCTATTTCAGCTGTACTGTTAGCTAAGATAGTGCCTCTTAGTGTGGTGGTTACGGTAACCGCCAACCACCCCCACTCCTAACTAACGCCCTACGCATATCCAAGCAACT
GTGCTGCATCGAGTGGAAGAGATTGGATCCTGTTTGGTACATCTATCATTGGTTAAGTGATGTGGGCAATGTCCTAGATTTCTCTAGTGTCGTCTCAAGTGCCAAATGCCAATTTATGAG
CTGTTTGGCTGCCGTACATGCATGGACCGCCGCACCTGACCGGCATGGGCTAACTAACTAGCTAGATGCAGACTGGAAATAGCGGCTGAGTGAAGTGGACCAATGCCGAATGTTCGAGTT
AATCATTATCGTTCTTTGGACTTGTTTGCTCTAGCTACCTGGCCACATTTTTATGCGCACCTGCACTGCATAGCTCAGAAGTGGGGTGATTGTGGGAGAGTAGCCTCATATATACTCGTA
GCGCTTGTTATGTATGGCATGATCCATCAAATGCATTCTTGGATTAGTTCCGGTTTAAGTATGCATTACATAGTTAAAAATGTTATGAAAACTAAAAACGTATATGTGATTATTATTATT
TTTGAAAATAACTGATTGCATTGTTCACATGCATACAAACCACATGACGCACGCACCCACACAACACATACAGAAGAAAAGAATGACCGGAGATGCCATACTAATGACGGACACGTCACC
TCCCACTAAAAAGATAATCCGTCTCAAATGGAACACACATGACATCGAATCTATGATCGAGGATTCAGCCACAACTTTAATCATCAATTGTTGGTTCTCATGATATGTTTTCTAAATCAA
TCTGGAACAGAATATATGGTCGTTTCTCTAGGACTGAAAAAGCAGTGGAAACTTTCAACCATTACAAAGAAAAAAGCTAGATGAGAATACAAATACCACACCAACAAAAATTGTGCAAAT
GAAAAAGAACAATGATTTCTGAAGAAACAGCCATGAAAATACGAAAATGGAATTTTCCATTTCAGCAAATACATAAATATGTCTGCCCACACAAGCCTATACTTAGCCCAACTGAATAAC
CCATAGGCCAACCCAAGCTTGTCTTGCCTTCTGGATACCCACTGTGAACCTAAACTCTCATATGTTTTCCAAACCCCCGCCCTTCGTGCATGACCACTTAGCTCTCGTGGTCTCTATCGT
CCTTCACAACGCTAGTTGCCCGACACATCGTTGCATCCTCTCAAGTTTCTCGAGATTTGTGTTGAATCAAGAGATCCAATGGTGCAACAAGGTCTAACACTGGGTCCGGTTCTTTTAGAA
TTATTTCTCCACCAGGACCTCGCCTCTCCATAGACGACCCATTTCCGATCCCATGTTTGTACCACCTCCACTTAACCACGCCTCAGCCTAGCGTGCCGTTTAACTGGGGGTTTTGTGTTT
TGACAAATATTTGCTTTTGTGTCTTTTACGTTCCACATTCACTCTATATTTAGTTTAATATATATTTTTTTATTTCCAGCTTTTGTGCTAAAAGATATGAAAACAAATACATAGCGCTAT
GTTTCATCCATTTTTGCCACTAGTAGTTATCTCAAACTTGATTTGAAAAGTGTGGCATCATTTCGTACTTATGCAAGACTTGGTATAGTTTTGCGAAACTTTTTCCCAATTTCTAGAGAA
AAGTACTTTTTTCGTCTCTCAACTTGTCGGAAAGTTTGCTTTTCGTCCCTCAAAAAATTTCGTACTTTTTTTGTCTCTCAATTTTCAAAACCGGACATTTTTAGTCTCTCGGTCCATCCA
AAGTGGTTTTCCTAACCACGTGTCTGGTTTTCGCATAGTTTTTTCACTTATTTTTTTTCAATCAAGATATGGATGATGCAGATGGAAGAGAAGTACAACCAGTGCCTAGACGAGATCCAG
AGCACGACGGCGGCCAATTTCAACAGCCTCGGCGACCACGGGATTAAGTGCAAACCGGACACGTGGCTAGACAAACCGCTTCGTATAGCTTTAAGGACTAAAAGTGTCTGGTTTTGAAAG
TTGAGAGATGAAAAAAGTACTAATTGTTTTTAAGAGACGAGAAATGAATTTTCCGACGAGTCGAGGGACGAAAAAAATACTTCTCTCCAATTTGTCTGTTTCAAACTTACCATACACAAA
CACATAAACATTTCGCAGGCGCACACACCATCGGCGTGGGCCACTGCAACCTGTTCAGCAGCCGCCTCTTCAGCTCCTCCTCCACCACCGGCGCCGGCGCCGCCGCCCCGGCCACGGACC
CGGCCCTGAACGCCGCCTACGCCGCGCAGCTGCGGGCCGCGTGCGGGTCCCCGTCCAACAACGCGACGGCGGTGGCCATGGACCCCGGCAGCCCGGCCCGGTTCGACGCCCACTACTACG
TGAACCTCAAGCTGGGCCGCGGCCTGTTCAGCTCCGACGCCGCGCTGCTGTCCGACCCCCGCGCCGCCGGCATGATCCACGCGCTCACCAGGGAGGACTACTTCCTCCGGGAGTTCAAGG
GCGCCGTCCGCAAGATGGGCCGCGTGGGCGTGCTCACCGGCGCCCAAGGGGAGATCAGGAGGAACTGCAGGGTCGTCAACTCGTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGATCAG TGAGAGCGCC GCGGCGGCTG GCATTACTGG CCGTCCTACT GTCGGCGTGC GCTCTGGCGG ATGCGGCGGT GCTGAAGGCG CACTTCTACC GGCACAGCTG CCCGGCGGCG  GAGGCGGTGG TGCGGGACAT CGTGCTGGCC CGCGTGGCGG CCGACCCCGC CAACGCGCTC CCGGCCAGGC TGCTCCGCCT CTTCTTCCAC GACTGCTTCG TGAGGGGCTG CGACGCGTCG  GTGCTGCTGG ACTCGGCGGC GGGCGACAAC GCGGCGGCGG CGGAGAAGGA CGCGGCGCCG AATAAGTCGC TGGGCGGGTT CGACGTGGTG GACACGGCCA AGGCGGTGCT GGAGGCCGTC  TGCCCCGGCG TCGTCTCCTG CGCCGACGTC GTCGCGCTCG CCGCCAGGGA CGCCATATCC TTCCAGTTTG GGCGGGAGCT GTGGGAGGTG CAGCTGGGGC GGCGGGACGG CGTGGAGTCG  CGCGCGGCGG AGGCGCTGGC GGAGATCCCG TCGCCGTCGG CCAACTTTAC GGCGCTGGAG GCCGGGTTCG CCAGCAAGGG GCTCGACGTC AAGGACCTCG TCATCCTCTC CGGCGCACAC  ACCATCGGCG TGGGCCACTG CAACCTGTTC AGCAGCCGCC TCTTCAGCTC CTCCTCCACC ACCGGCGCCG GCGCCGCCGC CCCGGCCACG GACCCGGCCC TGAACGCCGC CTACGCCGCG  CAGCTGCGGG CCGCGTGCGG GTCCCCGTCC AACAACGCGA CGGCGGTGGC CATGGACCCC GGCAGCCCGG CCCGGTTCGA CGCCCACTAC TACGTGAACC TCAAGCTGGG CCGCGGCCTG  TTCAGCTCCG ACGCCGCGCT GCTGTCCGAC CCCCGCGCCG CCGGCATGAT CCACGCGCTC ACCAGGGAGG ACTACTTCCT CCGGGAGTTC AAGGGCGCCG TCCGCAAGAT GGGCCGCGTG  GGCGTGCTCA CCGGCGCCCA AGGGGAGATC AGGAGGAACT GCAGGGTCGT CAACTCGTAG AGCCCGGTCC ATCCATCTGG AGGGGATCGG CTATGTATAT TCTGGTCATT TGGTGGTAAT  TAATTAATTA TTATATCGAG TTTGATTGTG TTTATTCAGG CGTGTTGTGG TGTGGACATG GATTGTGCAG AATAAGAAAT ATAAGCTGGC TAATTGGATT GATTCCAGCT GGGTTGTATA 
ATTTCGAGAT AAGTTGAACA TTGTGTTGTT CTGCCTAATG GTAGATAAGG GATTGTTGAT CTGGTACAAC A 

Retrieve as FASTA