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Entry information : BdiPrx118 (Bradi4g22660)
Entry ID 7884
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx118 (Bradi4g22660)
Name (synonym) BdiPrx118 (Bradi4g22660)
Class Class III peroxidase    [Orthogroup: Prx014]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx118
start..stop		 S start..stop
TaPrx75-1A 575 0 6..331 4..329
TaPrx75-1D 571 0 6..331 4..329
TaPrx75-1B 569 0 6..331 4..329
SbPrx88 523 0 23..331 30..341
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7884' 'complement(join(27099218..27099645,27099822..27099984,27100088..27100273,27100350..27100568))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 27100350..27100568 217 N° 2 27100088..27100273 184 N° 3 27099822..27099984 161 N° 4 27099218..27099645 426
complement(join(27099218..27099645,27099822..27099984,27100088..27100273,2710035 0..27100568))


exon

Literature and cross-references BdiPrx118 (Bradi4g22660)
DNA ref. Phytozome 12:   Bd4 (27100568..27099218)
Protein sequence: BdiPrx118 (Bradi4g22660)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (305)
PWM (Da):   %s   34542.49 (31999.1)  
PI (pH):   %s   6.13 (5.71) Peptide Signal:   %s   cut: 27 range:27-331
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSSRASTTMALLLLVLGAIVSVSQGQLQVGFYSSSCPGAESTVA
SAVRSASASDSTILPALLRLQFHDCFVRGCDASVLIKGGNNNAEVDNGKHQGLRGLDVIDSAKAQLESQCPGVVSCADIVVLAARDAVAFTGGPSFDVPTGRRDSKVSNLRDADVLPDVKDSAQVLRSKFAAAGLDHKDLVLLSAAHT
VGTTACFFIQDRLYNTPLPGGGRGSDPSIPDAFLSELKSRCAPGDFNTRLALDRGSERVFDTSILRNIRNGYAVIASDAALYNDTATVDVVDSYSGLLSAVFGPYFRPDFADAMVKMGSI
GVLTGSQGEVRKLCSKFN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, intron 1, 2 and 3), no EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCAGCAGCCGTGCAAGCACCACCATGGCCCTGCTCCTGCTAGTTCTAGGAGCAATCGTGAGCGTGTCCCAAGGGCAGCTCCAGGTGGGGTTCTACTCCAGCTCCTGCCCCGGCGCC
GAGTCCACGGTGGCCTCCGCCGTCCGGTCCGCCTCGGCCTCCGACTCCACCATCCTCCCCGCGCTCCTCCGCCTCCAGTTCCACGACTGCTTCGTCAGGGTAACAATCTTCTTCACGATG
AGATGATCGTCTTTCTAAATTTCTCTAAACTTGGATCATGGTTTATTTTTGCTAGGGGGGTGTGACGCGTCGGTGCTGATCAAGGGAGGGAACAACAACGCGGAGGTGGACAACGGGAAG
CACCAGGGGCTGCGTGGGCTGGACGTGATCGACAGCGCCAAGGCCCAGCTCGAGTCCCAGTGCCCCGGCGTCGTCTCCTGCGCCGACATCGTCGTCCTCGCCGCCCGTGACGCCGTCGCC
TTCGTACGAACATACATATGCACATATATGCACTCTGTCTCTTCTTCTTCTTTTTCACCGGCCTGATCGATTTCATTAATATGTTGTTTGCAATGCCTGGTTGCAGACACGGGCGGCCCG
TCGTTCGACGTGCCGACGGGCCGGCGCGACAGCAAGGTGTCGAACCTGCGCGACGCCGACGTGCTCCCAGACGTCAAGGACTCCGCCCAGGTCCTCCGCTCCAAGTTCGCCGCCGCCGGC
CTCGACCACAAGGACCTCGTCCTCCTGAGCGGTAAGCATCATTCGTGCATGCAACTCTCCATGCCGCAATAAAATTGGATGTGTGCATCATTTTCATGCAGAGTTCAGGATACTATCTTT
TTTCCAAAAAAAATATATGCAATTCTGTATCTTCCTTCCTGCTCATGTCCTAGCCTCACTGATCATGCGGCGAATGCATGCATGCAGCGCGGCGCACACGGTGGGCACGACGGCATGCTT
CTTCATCCAGGACAGGCTCTACAACACCCCGCTCCCGGGCGGCGGGCGGGGCTCGGACCCATCCATCCCTGACGCCTTCCTCTCCGAGCTCAAGTCCCGGTGTGCGCCGGGGGACTTCAA
CACGCGCTTGGCATTGGACCGGGGCAGCGAGAGGGTGTTCGACACGTCCATCCTCCGCAACATCCGCAATGGCTACGCCGTGATCGCCTCCGACGCGGCCCTCTACAACGACACGGCCAC
CGTCGACGTCGTCGACTCCTACTCGGGCCTCCTCAGCGCCGTCTTCGGCCCATATTTCCGGCCCGACTTCGCGGATGCCATGGTCAAGATGGGCAGCATCGGGGTGCTCACGGGGTCCCA
GGGGGAGGTCCGGAAGCTCTGCTCCAAGTTTAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCAGCAGCCGTGCAAGCACCACCATGGCCCTGCTCCTGCTAGTTCTAGGAGCAATCGTGAGCGTGTCCCAAGGGCAGCTCCAGGTGGGGTTCTACTCCAGCTCCTGCCCCGGCGCC
GAGTCCACGGTGGCCTCCGCCGTCCGGTCCGCCTCGGCCTCCGACTCCACCATCCTCCCCGCGCTCCTCCGCCTCCAGTTCCACGACTGCTTCGTCAGGGGGTGTGACGCGTCGGTGCTG
ATCAAGGGAGGGAACAACAACGCGGAGGTGGACAACGGGAAGCACCAGGGGCTGCGTGGGCTGGACGTGATCGACAGCGCCAAGGCCCAGCTCGAGTCCCAGTGCCCCGGCGTCGTCTCC
TGCGCCGACATCGTCGTCCTCGCCGCCCGTGACGCCGTCGCCTTCACGGGCGGCCCGTCGTTCGACGTGCCGACGGGCCGGCGCGACAGCAAGGTGTCGAACCTGCGCGACGCCGACGTG
CTCCCAGACGTCAAGGACTCCGCCCAGGTCCTCCGCTCCAAGTTCGCCGCCGCCGGCCTCGACCACAAGGACCTCGTCCTCCTGAGCGCGGCGCACACGGTGGGCACGACGGCATGCTTC
TTCATCCAGGACAGGCTCTACAACACCCCGCTCCCGGGCGGCGGGCGGGGCTCGGACCCATCCATCCCTGACGCCTTCCTCTCCGAGCTCAAGTCCCGGTGTGCGCCGGGGGACTTCAAC
ACGCGCTTGGCATTGGACCGGGGCAGCGAGAGGGTGTTCGACACGTCCATCCTCCGCAACATCCGCAATGGCTACGCCGTGATCGCCTCCGACGCGGCCCTCTACAACGACACGGCCACC
GTCGACGTCGTCGACTCCTACTCGGGCCTCCTCAGCGCCGTCTTCGGCCCATATTTCCGGCCCGACTTCGCGGATGCCATGGTCAAGATGGGCAGCATCGGGGTGCTCACGGGGTCCCAG
GGGGAGGTCCGGAAGCTCTGCTCCAAGTTTAACTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCACCACCTC TCCTCGAGCC ACACCCACAC ACACTCCTCC TTCACTACAC GTTCTAGCTA GATCCCCTTT CCCAAGATGG GCAGCAGCCG TGCAAGCACC ACCATGGCCC TGCTCCTGCT  AGTTCTAGGA GCAATCGTGA GCGTGTCCCA AGGGCAGCTC CAGGTGGGGT TCTACTCCAG CTCCTGCCCC GGCGCCGAGT CCACGGTGGC CTCCGCCGTC CGGTCCGCCT CGGCCTCCGA  CTCCACCATC CTCCCCGCGC TCCTCCGCCT CCAGTTCCAC GACTGCTTCG TCAGGGGGTG TGACGCGTCG GTGCTGATCA AGGGAGGGAA CAACAACGCG GAGGTGGACA ACGGGAAGCA  CCAGGGGCTG CGTGGGCTGG ACGTGATCGA CAGCGCCAAG GCCCAGCTCG AGTCCCAGTG CCCCGGCGTC GTCTCCTGCG CCGACATCGT CGTCCTCGCC GCCCGTGACG CCGTCGCCTT  CACGGGCGGC CCGTCGTTCG ACGTGCCGAC GGGCCGGCGC GACAGCAAGG TGTCGAACCT GCGCGACGCC GACGTGCTCC CAGACGTCAA GGACTCCGCC CAGGTCCTCC GCTCCAAGTT  CGCCGCCGCC GGCCTCGACC ACAAGGACCT CGTCCTCCTG AGCGCGGCGC ACACGGTGGG CACGACGGCA TGCTTCTTCA TCCAGGACAG GCTCTACAAC ACCCCGCTCC CGGGCGGCGG  GCGGGGCTCG GACCCATCCA TCCCTGACGC CTTCCTCTCC GAGCTCAAGT CCCGGTGTGC GCCGGGGGAC TTCAACACGC GCTTGGCATT GGACCGGGGC AGCGAGAGGG TGTTCGACAC  GTCCATCCTC CGCAACATCC GCAATGGCTA CGCCGTGATC GCCTCCGACG CGGCCCTCTA CAACGACACG GCCACCGTCG ACGTCGTCGA CTCCTACTCG GGCCTCCTCA GCGCCGTCTT  CGGCCCATAT TTCCGGCCCG ACTTCGCGGA TGCCATGGTC AAGATGGGCA GCATCGGGGT GCTCACGGGG TCCCAGGGGG AGGTCCGGAA GCTCTGCTCC AAGTTTAACT GATGATACCC  AGATCGAACG GAAGATTATT CAGACTTCGG AGATCCGCGA AGAATTGTTC ATCCTTCATT GCGCTGCCGG ATTAATGGTT GGCTAGCTGG AGATAGATCG CTCCAAAAAG CAGACTCTAG  CTATATAGCT GGCCCGTGCA TATGCATCTC GTGCATGGTT TCATGGGCAT GCATTTCGTC CTTGGATTAT TTAATTGTGT ACATGTGGGA AGAAAAAGAA GAGAGATCGA GGGGGGAGAG  TTAGTGTATT CATGTGATTC ATGGGAAATG GTTTTAGGAT CTGTGCAGTT TCTCTTTTTT GCAGTGGTGA TATTCCAAAT CGAAGATACT AGTAGTATAT TTTTGTTTTT TTATGTTTAT  ATGTACACAC ACATTATGTG CACTTATGCG GACGTGTTAT TATTTTGTTC TTGGGCAATG GTTCCTTTAA TTTATTTAAC GTCCGAGTGC TGCAACTGTA AATTCAGGAA AGGTCAATAT 
GGTGTGACCA TTCGTTGTCG ATCTACCTTA TATAGTCTTT TTGTTAGATT GTGAA 

Retrieve as FASTA