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Entry information : BdiPrx119 (Bradi4g25660)
Entry ID 7885
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx119 (Bradi4g25660)
Name (synonym) BdiPrx119 (Bradi4g25660)
Class Class III peroxidase    [Orthogroup: Prx266]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx119
start..stop		 S start..stop
TaPrx52-2D 540 0 14..327 8..321
TaPrx52-1B 539 0 13..327 7..321
TaPrx52-1D 539 0 13..327 7..321
TaPrx52-2A 538 0 13..327 7..321
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7885' 'complement(join(31033649..31034040,31034643..31034808,31034987..31035178,31035538..31035771))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 31035538..31035771 232 N° 2 31034987..31035178 190 N° 3 31034643..31034808 164 N° 4 31033649..31034040 390
complement(join(31033649..31034040,31034643..31034808,31034987..31035178,3103553 8..31035771))


exon

Literature and cross-references BdiPrx119 (Bradi4g25660)
DNA ref. Phytozome 12:   Bd4 (31035771..31033649)
Protein sequence: BdiPrx119 (Bradi4g25660)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (296)
PWM (Da):   %s   34230.24 (31317.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.93 (7.70) Peptide Signal:   %s   cut: 32 range:32-327
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAPGRNAVSTSVVLSCLLATLLLAAGSSSAQLSTGFYASSCPEL
LDAVRSALRPAVARERRVAASILRLFFHDCFVQGCDGSLLLDDASGLKGEKNAAPNKDSARGFDVVDAVKAAVEKACPGVVSCADVLAASAMEGVALLGGPRWKVKMGRRDSTTASFNGAENDIPPPTSGLANLTRLFAAKGLSQKDMVALSG
AHTIGLARCTNFRDHIYNDTDIDAGFAGTLQQRCPRATGSGDNNLAPLDLQTPNVFENAYYKNLVAKKSLLHSDQELFNGGAADAQVREYVGSQSAFFADFVEGMVKMGDVTPLTGSNGQ
IRKNCRRVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, 3 introns), no EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGCCGGGGAGAAATGCCGTGAGTACTAGTGTCGTCCTCAGCTGCCTCCTGGCGACCCTCCTGCTCGCCGCTGGAAGCTCCTCAGCTCAGCTGTCGACGGGCTTCTACGCCTCG
TCGTGCCCGGAGCTCCTCGACGCCGTGCGGTCGGCGCTCCGGCCGGCGGTGGCCCGGGAGCGGCGTGTGGCGGCGTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCCAGGTATAC
ATCAGTGATGATGCATGCATGAGGTCGATCGTCTCCACCACCACTGGGGTGGTGAGCTTGCTATATGCTACCACTTTTTCATAAATATAAGAAGTCTTTTCTCTTTGTCCTAAGTCAAAA
AAATTCGAGTTTGATCAAATTTATAGAAAAATTTATTAACATCTATAACTCCAAAATAGTTTTATTAAATCCCATCGGTCACTGCTTGATATTGTAGATCTTAATAGATTTTTATATAAA
TTTGGTTAAAAATTGAATAAGTTTGAGTTAGACAAAGCCAGAACTTCTTATGTTTACGAACGGATGTAGTATTAACCATCAATTAATGGCGGCTGCGACCACTGTGTGTGCAGGGGGCTG
CGACGGGTCACTGCTGCTGGACGATGCGTCAGGGTTGAAGGGCGAGAAGAACGCAGCCCCGAACAAGGACTCCGCCAGAGGGTTTGATGTAGTCGACGCTGTCAAGGCCGCCGTCGAGAA
GGCCTGCCCCGGCGTCGTCTCCTGCGCCGACGTGCTCGCCGCCTCCGCCATGGAAGGCGTCGCCCTCGTAAGCATAGCACACGTACTCCAATCCATGCATGTAGCTAGCAAGGATGTACT
CCCTCCGTCTCATATTAAATGATTTTCTGTTACATGTTTAGACAAATTTGAATCAATTAATATGTGACGGAGGGAGTATAAATTTGATTGCTTGAGCTGAAGGTGAAGCGTGTGTGTATG
TGTAGCTCTGGGCGGGCCGAGGTGGAAGGTAAAGATGGGGCGGAGGGACTCGACGACGGCGAGCTTCAACGGCGCAGAGAATGACATCCCACCGCCGACTTCCGGGCTCGCCAACCTCAC
CAGGCTCTTCGCTGCTAAGGGCCTCTCACAGAAGGACATGGTCGCCCTCTCAGGTATAATTTACATTCTAAATAATTTGTTCAATTAAGGCTGCTGAAATTACTGACTATATCATCTTAC
ACTATAATTCCTTAGTTGAGAAAAGGCAAGCTTTTTCAAACCACTTCACAGTTCACACTGTTAATTCCTCACTGGAGGAGGCCAGTAGCTTTACTAGCTAGGAGTCCAAAACAGCTGGTA
TACATCAACCAACAGATTTTTGATAGCTATGTTTTGACTTTTGACAAACATTCTCAGTTGACAGGTTAATTAATTAAACAAATATGATTTACAAGTGATGAGACCGAAAGTTGGTGACTA
ACTACCTTTGACCTTAATTAACTTGTCGTTTGCTTTGCAAGACTCTAGCTGGACAAATAAACCAGCAAATTAATTCTCCTTTTTTTCTGGACTGAATCCAGCAAACTCTCCTTTCCTTTC
TCACTAAACAAAACGTACAAATTAATTAATTAAGAAAGTTGGATAAGGATGGTTAATTATCTTTTCTGTTGGAACTTTCAGAGAATAGCTGTCCACAGAATGACATCAAAGGTAATTAAA
TATTTAGTTGTCTCACACCACAGCTCTCTGTTTTTTGCCTCGATCTGACGTCCAGGAGAGCCCACACGATCGGCCTAGCACGCTGCACAAACTTCCGGGACCACATCTACAACGACACCG
ACATCGACGCCGGCTTCGCCGGAACCCTCCAGCAGAGGTGCCCCCGCGCCACCGGCTCCGGGGACAACAACTTGGCTCCACTAGACCTCCAGACCCCGAACGTCTTCGAGAACGCCTACT
ACAAGAACCTCGTCGCGAAGAAGAGCCTCTTACACTCGGACCAGGAGCTCTTCAATGGCGGCGCCGCTGACGCGCAGGTCCGGGAGTATGTCGGTAGCCAGAGCGCCTTCTTTGCAGACT
TCGTGGAGGGGATGGTGAAGATGGGTGACGTCACGCCGCTCACGGGGTCGAATGGGCAGATCAGGAAGAACTGTCGGAGGGTTAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGCCGGGGAGAAATGCCGTGAGTACTAGTGTCGTCCTCAGCTGCCTCCTGGCGACCCTCCTGCTCGCCGCTGGAAGCTCCTCAGCTCAGCTGTCGACGGGCTTCTACGCCTCG
TCGTGCCCGGAGCTCCTCGACGCCGTGCGGTCGGCGCTCCGGCCGGCGGTGGCCCGGGAGCGGCGTGTGGCGGCGTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCCAGGGCTGC
GACGGGTCACTGCTGCTGGACGATGCGTCAGGGTTGAAGGGCGAGAAGAACGCAGCCCCGAACAAGGACTCCGCCAGAGGGTTTGATGTAGTCGACGCTGTCAAGGCCGCCGTCGAGAAG
GCCTGCCCCGGCGTCGTCTCCTGCGCCGACGTGCTCGCCGCCTCCGCCATGGAAGGCGTCGCCCTCCTGGGCGGGCCGAGGTGGAAGGTAAAGATGGGGCGGAGGGACTCGACGACGGCG
AGCTTCAACGGCGCAGAGAATGACATCCCACCGCCGACTTCCGGGCTCGCCAACCTCACCAGGCTCTTCGCTGCTAAGGGCCTCTCACAGAAGGACATGGTCGCCCTCTCAGGAGCCCAC
ACGATCGGCCTAGCACGCTGCACAAACTTCCGGGACCACATCTACAACGACACCGACATCGACGCCGGCTTCGCCGGAACCCTCCAGCAGAGGTGCCCCCGCGCCACCGGCTCCGGGGAC
AACAACTTGGCTCCACTAGACCTCCAGACCCCGAACGTCTTCGAGAACGCCTACTACAAGAACCTCGTCGCGAAGAAGAGCCTCTTACACTCGGACCAGGAGCTCTTCAATGGCGGCGCC
GCTGACGCGCAGGTCCGGGAGTATGTCGGTAGCCAGAGCGCCTTCTTTGCAGACTTCGTGGAGGGGATGGTGAAGATGGGTGACGTCACGCCGCTCACGGGGTCGAATGGGCAGATCAGG
AAGAACTGTCGGAGGGTTAACTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCCAGAGCTA GCACAGTGCA CTTAGCTAGC TTACTTTGCT CTCCATCATA CTACCAATCA TGGCGGCGCC GGGGAGAAAT GCCGTGAGTA CTAGTGTCGT CCTCAGCTGC CTCCTGGCGA  CCCTCCTGCT CGCCGCTGGA AGCTCCTCAG CTCAGCTGTC GACGGGCTTC TACGCCTCGT CGTGCCCGGA GCTCCTCGAC GCCGTGCGGT CGGCGCTCCG GCCGGCGGTG GCCCGGGAGC  GGCGTGTGGC GGCGTCCATC CTCCGCCTCT TCTTCCACGA CTGCTTCGTC CAGGGCTGCG ACGGGTCACT GCTGCTGGAC GATGCGTCAG GGTTGAAGGG CGAGAAGAAC GCAGCCCCGA  ACAAGGACTC CGCCAGAGGG TTTGATGTAG TCGACGCTGT CAAGGCCGCC GTCGAGAAGG CCTGCCCCGG CGTCGTCTCC TGCGCCGACG TGCTCGCCGC CTCCGCCATG GAAGGCGTCG  CCCTCCTGGG CGGGCCGAGG TGGAAGGTAA AGATGGGGCG GAGGGACTCG ACGACGGCGA GCTTCAACGG CGCAGAGAAT GACATCCCAC CGCCGACTTC CGGGCTCGCC AACCTCACCA  GGCTCTTCGC TGCTAAGGGC CTCTCACAGA AGGACATGGT CGCCCTCTCA GGAGCCCACA CGATCGGCCT AGCACGCTGC ACAAACTTCC GGGACCACAT CTACAACGAC ACCGACATCG  ACGCCGGCTT CGCCGGAACC CTCCAGCAGA GGTGCCCCCG CGCCACCGGC TCCGGGGACA ACAACTTGGC TCCACTAGAC CTCCAGACCC CGAACGTCTT CGAGAACGCC TACTACAAGA  ACCTCGTCGC GAAGAAGAGC CTCTTACACT CGGACCAGGA GCTCTTCAAT GGCGGCGCCG CTGACGCGCA GGTCCGGGAG TATGTCGGTA GCCAGAGCGC CTTCTTTGCA GACTTCGTGG  AGGGGATGGT GAAGATGGGT GACGTCACGC CGCTCACGGG GTCGAATGGG CAGATCAGGA AGAACTGTCG GAGGGTTAAC TAATTAACTA GTTTCTGTCA GAAAGCTAGC TGTTGTGATA  TGAATTATGA TATGGTTGTT TCCTGCCGTA TGATTCTGTT TCTGCAATTG TTAAGCTAAT TATGTATTGT GGCATGCTAG CTGCAAAGTG GTTTATATTG CTCGGTCGAG TGAAATGCAA 
TGGAAGTCCT AGAAGTATTG TGGAACCAA 

Retrieve as FASTA