View Redoxidase 7889

Entry information : BdiPrx123 (Bradi4g40190)

Entry ID	7889
Creation	2011-01-17 (Toky Ramarohetra)
Last sequence changes	2011-01-17 (Toky Ramarohetra)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2014-01-08 (Qiang Li)

Peroxidase information: BdiPrx123 (Bradi4g40190)

Name (synonym)

BdiPrx123 (Bradi4g40190)

Class

Class III peroxidase [Orthogroup: Prx096]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium

Organism

Brachypodium distachyon [TaxId: 15368 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BdiPrx123 start..stop	S start..stop
BdiPrx41	468	7.28e-168	1..325	1..323
TaPrx59-2B	462	2.14e-165	1..325	1..323
TaPrx59-3B	457	1.34e-163	1..325	1..324
TaPrx59-1A	455	1.52e-162	3..325	2..323

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	44647359..44648336	976
complement(join(44647359..44648336))

Literature and cross-references BdiPrx123 (Bradi4g40190)

DNA ref.	Phytozome 12: Bd4 (44648336..44647359)

Protein sequence: BdiPrx123 (Bradi4g40190)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	325 (301)
PWM (Da):	33761.19 (31298.9)
PI (pH):	8.26 (8.21)	Peptide Signal:	cut: 25 range:25-325

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MASSFVKLSV ALTCLLLLSS TCHGSHGPNV GHYKKTCPNA EAIVRDSVKS SVYKDAGVGA GLIRLLFHDC FVQGCDGSVL LDPSPSNPQP EKLSAPNFRS LRGFEAVDAA KAAVERACPG VVSCADVVAF AARDAAYFLS GLRVKADMPG GRLDGRVSRS DEAARDLPPA SANLAQLVSN FAAKGLGEED MVVLSGAHSV GASHCSSFVP GGRLEGPGRS DMDAGLAAVL KKQCAPGQNP
LVPQDAVSPN ALDSQYYRNV LAHKVLLPSD AALLAAPATE KMVRDNAYVP GKWEGKFAEA LVKMAAIGVK TGQQGEIRKN CRVVN

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 4, no intron), no EST.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCTTCAT CTTTTGTTAA GCTTTCCGTG GCGCTGACCT GCTTATTGCT CTTGTCCTCA ACGTGCCATG GCAGCCATGG CCCGAACGTG GGCCACTACA AGAAGACCTG CCCCAACGCG GAGGCCATCG TGAGAGACTC CGTGAAGAGC TCCGTCTACA AGGACGCCGG CGTCGGCGCG GGGCTCATCC GGCTCCTCTT CCACGACTGC TTCGTCCAGG GCTGCGACGG CTCCGTGCTC CTCGACCCTT CCCCGTCCAA CCCGCAGCCG GAGAAGCTGA GCGCGCCCAA CTTCCGCAGC CTCCGTGGCT TCGAGGCCGT CGACGCCGCC AAGGCCGCCG TGGAGCGCGC CTGCCCGGGC GTCGTCTCCT GCGCCGACGT CGTCGCCTTC GCCGCCCGCG ACGCCGCCTA CTTCCTCAGC GGGCTCAGGG TGAAAGCCGA CATGCCGGGG GGGCGGCTCG ACGGGCGTGT GTCCAGATCC GACGAGGCCG CCCGGGACCT GCCGCCGGCG TCGGCGAATC TCGCGCAGCT CGTCTCCAAC TTCGCGGCGA AGGGGCTGGG GGAGGAGGAC ATGGTGGTGC TCTCCGGCGC GCACTCCGTC GGCGCCTCCC ACTGCTCCTC CTTCGTGCCC GGCGGCCGCC TCGAGGGCCC CGGGAGGTCC GACATGGACG CCGGCCTGGC TGCTGTGCTG AAGAAGCAGT GCGCGCCGGG GCAGAACCCA TTGGTGCCGC AGGACGCGGT GAGCCCTAAC GCGCTGGACA GCCAGTACTA CCGGAACGTG CTGGCGCATA AGGTGCTCCT CCCGTCCGAC GCCGCGCTGC TGGCGGCGCC GGCGACGGAG AAGATGGTGC GTGATAACGC GTATGTCCCT GGGAAGTGGG AGGGCAAGTT CGCGGAGGCG TTGGTGAAGA TGGCGGCCAT TGGGGTCAAG ACCGGACAGC AGGGCGAGAT CAGGAAGAAC
TGCAGGGTCG TCAATTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA