The peroxidases and oxidases database
Entry information : BdiPrx123 (Bradi4g40190)
Entry ID 7889
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx123 (Bradi4g40190)
Name (synonym) BdiPrx123 (Bradi4g40190)
Class Class III peroxidase     [Orthogroup: Prx096]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx123
start..stop		 S start..stop
BdiPrx41 468 7e-168 1..325 1..323
TaPrx59-2B 462 2e-165 1..325 1..323
TaPrx59-3B 457 1e-163 1..325 1..324
TaPrx59-1A 455 1e-162 3..325 2..323
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 44647359..44648336 978  
complement(join(44647359..44648336))


exon

Literature and cross-references BdiPrx123 (Bradi4g40190)
DNA ref. Phytozome 12:   Bd4 (44648336..44647359)
Protein sequence: BdiPrx123 (Bradi4g40190)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (301)
PWM (Da):   %s   33761.19 (31298.9)  
PI (pH):   %s   8.26 (8.21) Peptide Signal:   %s   cut: 25 range:25-325
Sequence 0
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Send to Peroxiscan
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MASSFVKLSV ALTCLLLLSS TCHGSHGPNV GHYKKTCPNA EAIVRDSVKS SVYKDAGVGA GLIRLLFHDC FVQGCDGSVL LDPSPSNPQP EKLSAPNFRS LRGFEAVDAA KAAVERACPG  VVSCADVVAF AARDAAYFLS GLRVKADMPG GRLDGRVSRS DEAARDLPPA SANLAQLVSN FAAKGLGEED MVVLSGAHSV GASHCSSFVP GGRLEGPGRS DMDAGLAAVL KKQCAPGQNP 
LVPQDAVSPN ALDSQYYRNV LAHKVLLPSD AALLAAPATE KMVRDNAYVP GKWEGKFAEA LVKMAAIGVK TGQQGEIRKN CRVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, no intron), no EST.
DNA ►
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ATGGCTTCAT CTTTTGTTAA GCTTTCCGTG GCGCTGACCT GCTTATTGCT CTTGTCCTCA ACGTGCCATG GCAGCCATGG CCCGAACGTG GGCCACTACA AGAAGACCTG CCCCAACGCG  GAGGCCATCG TGAGAGACTC CGTGAAGAGC TCCGTCTACA AGGACGCCGG CGTCGGCGCG GGGCTCATCC GGCTCCTCTT CCACGACTGC TTCGTCCAGG GCTGCGACGG CTCCGTGCTC  CTCGACCCTT CCCCGTCCAA CCCGCAGCCG GAGAAGCTGA GCGCGCCCAA CTTCCGCAGC CTCCGTGGCT TCGAGGCCGT CGACGCCGCC AAGGCCGCCG TGGAGCGCGC CTGCCCGGGC  GTCGTCTCCT GCGCCGACGT CGTCGCCTTC GCCGCCCGCG ACGCCGCCTA CTTCCTCAGC GGGCTCAGGG TGAAAGCCGA CATGCCGGGG GGGCGGCTCG ACGGGCGTGT GTCCAGATCC  GACGAGGCCG CCCGGGACCT GCCGCCGGCG TCGGCGAATC TCGCGCAGCT CGTCTCCAAC TTCGCGGCGA AGGGGCTGGG GGAGGAGGAC ATGGTGGTGC TCTCCGGCGC GCACTCCGTC  GGCGCCTCCC ACTGCTCCTC CTTCGTGCCC GGCGGCCGCC TCGAGGGCCC CGGGAGGTCC GACATGGACG CCGGCCTGGC TGCTGTGCTG AAGAAGCAGT GCGCGCCGGG GCAGAACCCA  TTGGTGCCGC AGGACGCGGT GAGCCCTAAC GCGCTGGACA GCCAGTACTA CCGGAACGTG CTGGCGCATA AGGTGCTCCT CCCGTCCGAC GCCGCGCTGC TGGCGGCGCC GGCGACGGAG  AAGATGGTGC GTGATAACGC GTATGTCCCT GGGAAGTGGG AGGGCAAGTT CGCGGAGGCG TTGGTGAAGA TGGCGGCCAT TGGGGTCAAG ACCGGACAGC AGGGCGAGAT CAGGAAGAAC 
TGCAGGGTCG TCAATTAG 

Retrieve as FASTA  
CDS►
Send to BLAST
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ATGGCTTCAT CTTTTGTTAA GCTTTCCGTG GCGCTGACCT GCTTATTGCT CTTGTCCTCA ACGTGCCATG GCAGCCATGG CCCGAACGTG GGCCACTACA AGAAGACCTG CCCCAACGCG  GAGGCCATCG TGAGAGACTC CGTGAAGAGC TCCGTCTACA AGGACGCCGG CGTCGGCGCG GGGCTCATCC GGCTCCTCTT CCACGACTGC TTCGTCCAGG GCTGCGACGG CTCCGTGCTC  CTCGACCCTT CCCCGTCCAA CCCGCAGCCG GAGAAGCTGA GCGCGCCCAA CTTCCGCAGC CTCCGTGGCT TCGAGGCCGT CGACGCCGCC AAGGCCGCCG TGGAGCGCGC CTGCCCGGGC  GTCGTCTCCT GCGCCGACGT CGTCGCCTTC GCCGCCCGCG ACGCCGCCTA CTTCCTCAGC GGGCTCAGGG TGAAAGCCGA CATGCCGGGG GGGCGGCTCG ACGGGCGTGT GTCCAGATCC  GACGAGGCCG CCCGGGACCT GCCGCCGGCG TCGGCGAATC TCGCGCAGCT CGTCTCCAAC TTCGCGGCGA AGGGGCTGGG GGAGGAGGAC ATGGTGGTGC TCTCCGGCGC GCACTCCGTC  GGCGCCTCCC ACTGCTCCTC CTTCGTGCCC GGCGGCCGCC TCGAGGGCCC CGGGAGGTCC GACATGGACG CCGGCCTGGC TGCTGTGCTG AAGAAGCAGT GCGCGCCGGG GCAGAACCCA  TTGGTGCCGC AGGACGCGGT GAGCCCTAAC GCGCTGGACA GCCAGTACTA CCGGAACGTG CTGGCGCATA AGGTGCTCCT CCCGTCCGAC GCCGCGCTGC TGGCGGCGCC GGCGACGGAG  AAGATGGTGC GTGATAACGC GTATGTCCCT GGGAAGTGGG AGGGCAAGTT CGCGGAGGCG TTGGTGAAGA TGGCGGCCAT TGGGGTCAAG ACCGGACAGC AGGGCGAGAT CAGGAAGAAC 
TGCAGGGTCG TCAATTAG 

Retrieve as FASTA