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Entry information : BdiAPx07 (Bradi5g10490)
Entry ID 7896
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-19 (Toky Ramarohetra (Scipio))
Peroxidase information: BdiAPx07 (Bradi5g10490)
Name (synonym) BdiAPx07 (Bradi5g10490)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiAPx07
start..stop		 S start..stop
HvAPx06 606 0 1..345 1..348
TaAPx02-1B 595 0 1..345 1..348
TaAPx02-1D 593 0 1..345 1..348
TaAPx02-1A 592 0 1..345 1..348
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7896' 'complement(join(13762867..13762887,13763089..13763193,13763285..13763362,13763445..13763519,13763923..13764009,13764092..13764159,13764461..13764548,13764649..13764749,13764840..13764960,13767796..13767924,13768006..13768170))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13768006..13768170 163 N° 2 13767796..13767924 127 N° 3 13764840..13764960 119 N° 4 13764649..13764749 99
N° 5 13764461..13764548 86 N° 6 13764092..13764159 66 N° 7 13763923..13764009 85 N° 8 13763445..13763519 73
N° 9 13763285..13763362 76 N° 10 13763089..13763193 103 N° 11 13762867..13762887 19  
complement(join(13762867..13762887,13763089..13763193,13763285..13763362,1376344 5..13763519,13763923..13764009,13764092..13764159,13764461..13764548,13764649..1 3764749,13764840..13764960,13767796..13767924,13768006..13768170))


exon

Literature and cross-references BdiAPx07 (Bradi5g10490)
DNA ref. Phytozome 12:   Bd5 (13768170..13762867)
EST ref. GenBank:   GT766713.1 [3' end]
Protein sequence: BdiAPx07 (Bradi5g10490)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345 (302)
PWM (Da):   %s   37327 (32339.2)  
PI (pH):   %s   9.36 (8.58) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAERLAAAAALRTSAPYHPSPSGRRAGPSNSAFFPSSSSPSPALR
RVSLRAAPSQKAKAAGRGRSLRCMAAASDAAQLKAAREDTRELLKTTHCHPILVRLGWHDSGTYDKNIEEWPQRGGANGSLRFDVELKHGANAGLINALKLIQPIKDKYPSITYADLFQLASATAIEAGG
PKLPMRYGRVDVTGPEQCPPEGKLPDAGPSAPADHLRVVFYRMGLDDEIVALSGAHTLGRSRPERSGWGKPETRYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAAL
FEDPAFKVYAEKYAEDQVAFFKDYAEAHAKLSSLGAKFDPAEGFSLDD*

Retrieve as FASTA  
Remarks Complete sequence fom genomic (chromo 5, 10 introns), 6 ESTs. Strain="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGAGCGCCTAGCTGCAGCCGCCGCCCTCCGTACTTCCGCTCCGTACCATCCCTCCCCGTCCGGCCGCCGCGCCGGGCCATCCAACTCCGCCTTCTTCCCGTCCTCATCCTCGCCT
TCGCCGGCTCTCCGCCGCGTCAGCCTCCGCGCCGCGCCCTCCCAGGTCAGGTTCGGGGCGGTTCAGGATGTCAACCTCAGTGTTCTGGTTGTTGAGTTGTGCTTGGTTATACTTGTGTGA
TCGCAGAAAAGGCCAAGGCGGCGGGGAGGGGGCGATCTTTGAGGTGCATGGCGGCGGCGTCGGACGCGGCGCAGCTGAAGGCCGCGCGCGAGGACACCAGGGAGCTCCTCAAGACAACCC
ACTGCCATCCCATCCTGGTACGTTTAGTACCGTAGACTGACACGCTATGCCACGCGCTTAGGATACCAAGAAATTTTTCCTTGAATCACCATCTTGTAGGACAGCGAGTTGAATTTAATC
TTAGAGCAATGTGGGGATTTAACATCGTAAAGTGCTTTGTTAGACAGCTTGCTTATCTCAAAAGGGCTTGTCAGTTGTGTAACCTCTAGATCCAATTGCAGCATCGATCATTTACAGTGA
CAAAGGCTGGCAGCAGCTTTTCTGAATTCGACTGTCAAGTGCCAACTGCCAAATGATCTGCTCGTACTTAAGTCAGGCTTCAGTGGTCACTTGTACATCTCGTTCCATTTTCTCACTATG
GAGCTTAAAATGCTTCTATTTGTGATGCATGGAGCTTATCCCTTATATACAGACAGAATTTTGATTATACATGAGATATTCGACTATTCGTTCCGTTCCAAAATATAAGGCACATAAATA
TAGGTGTGGTCAACATTCTAAAATTTGAATAATAATATATGCGAAGTTATATGGATTGGACATGTAACAATAATATCATATTTGTCTTGTAAAATATTTTTATGCTGTATGCCCTTTAAT
AATTTTGTAGGCATATTATAAGCCAAAATCATTCTCAAAATTGTGCATTGAGTATCTGTGAAAAATAAAGCATGTCTTGTATTTTGCACAGAGAGTGTTTGTTTTGTCATCTGTATTGTA
TGAAGTATGTAAATAAAATTGACCAATAAGAATATTAGATGATCTTGGTTGCTTAGCCATCAAATCTGGCGACATGAATGTTGTTGTAGTAAAATAAAACCCTTGTATGGGCCGGGCCAT
AAATCCTACGTGGCGACGACTAGGTCAGCATTTTCCTACATGGGTCAAGATGCCAACATGGCGTGGTCAATCCTATATGGCAATGGTCAAGACAAGTCAACAAGTCAAGCCTCTCATGTC
ATGGTCAAATGGTGGAATGAGCTTTTTCCAAGTCAACCCCTACTTTTCCCACTTGGTGCACATAAAAGCTATGGACCAAGGAGCTACTTTTACCACTTTGCCCCCACTTTTCTCTCTCCC
TCAAGGGTAGCCATGGTCTTTTGTCATGGACCCCTAAGCTATAAATACCCCCCCATGGGGGCATGTACCATTCACTCTCAACTTGAATAAACTCAAGGGGAGAGGGCTAGAGTGCTCCCT
CTAAGGTTTGCTTTCGAGCTCCGCTTTCGACTAAAAGTCAACCGGCCTCGAGGAAGCCTTCTAGGGGACTCTAGTTTCGAGGCTCCGCGCTAAACTCGGTTAGCGCGGGCTCGAAGGAGA
AGGGGTTGGGTTAGAGTTCCGAGGGTATCCTAACCTCGATACTTGGAAAGACGCGTTCGGTCCAAGTACGAGGCGGCCCTGACGAATCTCTCGCTAAAGGTGTCGTGGGAAGATCCGCTC
GGCCCAAGCACTTGGCTAACAACCCCTCGAATCCTTTCCTAACATAGGACTAAGTCGTACCCGCAGGGTCGACTGAACCTATTCAAAAAATATCGACATGTCAACTTGTCCAAGTGTACG
GCGACCTTCGCTATAAGGCCGGCGTACACACCCTACTTTCATACACGCACTTGTGCCATCGAGCATTGGCACCCCTTACTCTAATTGTTGTCAAGAACAACAACAAATGTTATGTCACTA
ATGATACTTGACAAATGAAGAGCACTATCAAATGACTCTTTAGGCAGGGATGAAGCCAGGAAAAATATCCACTGGGTTCAGCCACTAAGGGAATATTTTAGTGAGCTAATTGTAATAGTG
GTGTAACCTTGCACCAAGTTGTCATAAAATTAGCAGAACAAAAACTTATAAGACATTATTAAAAAATTATGAAATGATATAATTGTTGTTACATTCAAAAACAAGACATACTGATTGCTG
ATTTGGCGAAGTCATAAAATCACTTACTTACATATTTCTAACAAAGTAAGAAGATGATTTCCCAGCTTTCGTAGCTTCCCGGAAAGAATGAGCTAAAAGAACGTAGTATTATATTCACAG
TAGTAGTAGGAACAAAATATTACACTAAATACGTTAAGTGAAACATGAAAGGTCCCTCACACTTTAAAATTCCCCTTCTTGATTTATCTTCCTAAAGAGAGAAATCAGGCGTACATGAGC
CACCAATTGGCTACTGAGTTGCCGCATCGTATGTTGTGGGTGGCAGGTCCTTGGCGGGTTGGTTGTTGACTGGTCGCCAGTTCGTGTGACTAGCCTTAAGGCTGTACTTAAGCTTAGAGC
CTGGGACTTTGGTCTTCTGCACCTGGGCTCGGATAATCTGTTTTTTTTTGGTTGTATTCAATCATTCAATGACATATTACATATATACTCCCTGTCCTAGTTGAAACGCTGGGTAGCATT
GGTGTCACGTGACACCAGCGCTAAGCTAGCTCCGTCCCTGTCCTTAACTGGAAGTCTGCTTTCAATCACTGCATGCTACATTTTCTTTTATTTTACCTTTGTGTGGTCATGGGAAGTTTA
TCCTTGTCGGTAACTATCTTGGATATTTTTGCCCCGTTGGTAGTCATAGAAGCTTATGGCATCGATAGGACTGCTATCTGTTCAAATAAGCACTCTTCATCGAGATTTTCAAAAAGAAAT
AGAGAAAAGAAAAATGAGAAGTGAAACTTTTCATATCATGTTGAAGCTGGGATGATATGTGTCCCTTTCTAAAAGCAAATCATTTTGCAATATGCAATGACATAGACCTTATGCTTTTGT
TTTATTATTCGAATACATACCGATGTATGCAAGATCTTAATTTGTTTTCTTTATCGAAGATTATTAATTGTTATATGTTTGACTGCATGAAGGTGTTCGTCTGGGATGGCACGATTCTGG
CACATATGACAAGAATATTGAGGAGTGGCCACAACGTGGTGGGGCTAATGGAAGCTTAAGATTTGATGTTGAGTTGAAACATGGAGCCAATGCAGGTACAGTTACTTGGATTTTCACCAT
TCTATTTCTTTGTTCCCCCTATGTGTACAGGTAATAACTAAAATCCCTGATTGGTATCCTTAAAGGTGTTTGATAAATGCTCTAAAGCTTATTCAACCGATCAAGGACAAATATCCGAGT
ATCACTTACGCAGATTTATTCCAGTTGGCAAGTGCTACAGCAATTGAGGTCTGACCTTCCCCCCATTGAAGTATCTGGCTATGTTAGTTTTAATAAATAAGGACTGTACTCAAACCTAAT
GATCTTTCTTTTGTCAATCTCGTACCAGGAGAAGCTGGTGGCCCAAAGCTTCCAATGAGATATGGACGGGTTGATGTCACAGGACCTGAGCAGTGTCCACCTGAGGGCAAGCTTCCTGGT
TAGCACTGTTCACCAACCATTCTAGTTTCTTGTCTTCTGTACCAATATCCTTCTCAGTCTTTTTTGTGTCTGCAAAAATGTTCTAAAGATACGAAGCATCTCTCGAGTCCTGACTGCTTG
AAATATGAACTAAGTGTATATCTGTTATTTCCACAGTTTTACTGAATAATTATTGCCACATTGATAGCACTGGATATGTGCTTAAGAATTTATAGACAAAAATGCACCGGCTTGTTGCTA
AAATCATTTAATCTGATGCTTGGTGACTCTTGAATGAACTGTTCGGTTGGGTTTTTCAGATATGCTGGCCCAAGTGCACCTGCTGACCACTTGAGGGTGGTATTCTACAGAATGGGCCTT
GATGACAAGGTGCACAAATAATTATCTGAGTTACCTGTTTGCCCATGTTCTTTTAACTGGCTTTGTTGAGCTGTGTACCCTGTGTCTGCAGGAGAAATTGTTGCATTGTCTGGCGCACAT
ACACTTGGAAGGTCTAGGCCTGAACGGAGTGGCTGGGGGAAACCTGAAACGAGATATACTGTACGTTTATCTTAACATCTCTGTGCATATATGCCATGTTGGATGTTTTGATTTCGATGT
TCAGGTTAATAATTGGGTAGCATGTTACAGTATCATTTTGAGCACATGTGCTTTATCAATATTTCTGCTTAAAATTACCCTTAATCTCTCTGGGAACGCTGTGCTTGCTTTCAAGATCTG
GACATGCCGGCGTACAGTTGAGCCTGTCATGCTTAACATATTGTTTATTAGCCTTTATTCATGTCGGATGGTGTCAGTTGATGCATGCAAATTTTAGCCCCCACCATATTTACAATACGT
CTTCAAAACATCGATGCTACATGCACTGCTCCATGAAGCTAGATGCACATGACTATTGGCTGCATGAGTGAAGTTCTTGAATATGTTTTTATCACTTGGACAGAAAAAAATGGTCCTGGT
GCCCCTGGTGGTCAATCATGGACAGCTGAATGGCTGAAGTTTGATAACAGTTACTTCAAGGTAAGTGACCCATTTTCCATATTGTACATGCGTGGGCAATTCATCTGATTTTGGGAGATC
TGAACTGGTAGCAATACTTTAGGAGAGATAAAAGAGAAGAGAGATCAGGACCTTCTGGTCTTGCCTACAGATGCTGCATTATTTGAGGACCCAGCATTCAAGGTGATTCTGATGCTAAAT
CTGCATGTTCTCAGTATCCTATGAAAATGAAATAACTATTAAACTTACTACCTGAGAATGACAACACTTTCAGGTGTCTATGCAGAGAAATATGCGGAGGACCAAGTAGCATTCTTTAAG
GACTACGCCGAAGCTCATGCTAAACTGAGCAGCCTGGGTGCAAAGTTTGATCCTGCTGAGGTCAGTGCAGCATTTCGTTCATAGTTTTCCGACAGCTGGTCACCTTTTTAGTCTTAGTTT
AGACAGATAGCACATTCACTTGTGTAGCTGGTAAGTCTGGTAACAGCTCGTTCTGACAAACCGTTGCAGATGTTGCTCTGCTGAGTTGTGCCAACCTTATCGTCCTTGTGTTTCATACTG
ATCTATGTGGTTATCCTGCAGGGGGATTCTCATTGGATGATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGAGCGCCTAGCTGCAGCCGCCGCCCTCCGTACTTCCGCTCCGTACCATCCCTCCCCGTCCGGCCGCCGCGCCGGGCCATCCAACTCCGCCTTCTTCCCGTCCTCATCCTCGCCT
TCGCCGGCTCTCCGCCGCGTCAGCCTCCGCGCCGCGCCCTCCCAGAAGGCCAAGGCGGCGGGGAGGGGGCGATCTTTGAGGTGCATGGCGGCGGCGTCGGACGCGGCGCAGCTGAAGGCC
GCGCGCGAGGACACCAGGGAGCTCCTCAAGACAACCCACTGCCATCCCATCCTGGTTCGTCTGGGATGGCACGATTCTGGCACATATGACAAGAATATTGAGGAGTGGCCACAACGTGGT
GGGGCTAATGGAAGCTTAAGATTTGATGTTGAGTTGAAACATGGAGCCAATGCAGGTTTGATAAATGCTCTAAAGCTTATTCAACCGATCAAGGACAAATATCCGAGTATCACTTACGCA
GATTTATTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGCCCAAAGCTTCCAATGAGATATGGACGGGTTGATGTCACAGGACCTGAGCAGTGTCCACCTGAGGGCAAGCTT
CCTGATGCTGGCCCAAGTGCACCTGCTGACCACTTGAGGGTGGTATTCTACAGAATGGGCCTTGATGACAAGGAAATTGTTGCATTGTCTGGCGCACATACACTTGGAAGGTCTAGGCCT
GAACGGAGTGGCTGGGGGAAACCTGAAACGAGATATACTAAAAATGGTCCTGGTGCCCCTGGTGGTCAATCATGGACAGCTGAATGGCTGAAGTTTGATAACAGTTACTTCAAGGAGATA
AAAGAGAAGAGAGATCAGGACCTTCTGGTCTTGCCTACAGATGCTGCATTATTTGAGGACCCAGCATTCAAGGTCTATGCAGAGAAATATGCGGAGGACCAAGTAGCATTCTTTAAGGAC
TACGCCGAAGCTCATGCTAAACTGAGCAGCCTGGGTGCAAAGTTTGATCCTGCTGAGGGATTCTCATTGGATGATTAG

Retrieve as FASTA